Guide to the Human Genome
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Name: ANKRD55 Sequence: fasta or formatted (614aa) NCBI GI: 90186267
Description:

ankyrin repeat domain 55 isoform 1

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [326aa] ankyrin repeat domain 55 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         46           4
 C cysteine            2.3         14           2
 D aspartate           6.2         38           2
 E glutamate           5.4         33           2
 F phenylalanine       2.3         14           1
 G glycine             4.6         28           1
 H histidine           4.4         27           2
 I isoleucine          3.7         23           2
 K lysine              4.9         30           3
 L leucine            10.4         64           3
 M methionine          2.3         14           2
 N asparagine          5.9         36           2
 P proline             6.5         40           3
 Q glutamine           5.9         36           2
 R arginine            6.0         37           2
 S serine              9.1         56           3
 T threonine           5.7         35           2
 V valine              4.6         28           1
 W tryptophan          1.0          6           1
 Y tyrosine            1.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 55 isoform 1 
ANKRD55               0.523   ankyrin repeat domain 55 isoform 2 
INVS                  0.100   inversin isoform a 
INVS                  0.100   inversin isoform b 
ANKRD52               0.084   ankyrin repeat domain 52 
ANKRD28               0.077   ankyrin repeat domain 28 
ANKRD44               0.071   ankyrin repeat domain 44 
ANKRD50               0.071   ankyrin repeat domain 50 
ANKK1                 0.068   ankyrin repeat and kinase domain containing 1 
MIB1                  0.065   mindbomb homolog 1 
ANK1                  0.064   ankyrin 1 isoform 9 
ANK1                  0.064   ankyrin 1 isoform 1 
ANK1                  0.064   ankyrin 1 isoform 3 
ANK1                  0.064   ankyrin 1 isoform 2 
ANK1                  0.064   ankyrin 1 isoform 4 
RIPK4                 0.064   ankyrin repeat domain 3 
ANKDD1A               0.063   ankyrin repeat and death domain containing 1A 
ANK2                  0.061   ankyrin 2 isoform 3 
ANK2                  0.061   ankyrin 2 isoform 2 
ANK2                  0.061   ankyrin 2 isoform 1 
TNNI3K                0.060   TNNI3 interacting kinase isoform b 
TNNI3K                0.060   TNNI3 interacting kinase isoform a 
ANK3                  0.059   ankyrin 3 isoform 1 
CASKIN2               0.059   cask-interacting protein 2 isoform a 
ANKS1A                0.059   ankyrin repeat and sterile alpha motif domain conta...
ESPNL                 0.058   espin-like 
ANKS1B                0.057   cajalin 2 isoform a 
KIDINS220             0.057   kinase D-interacting substrate of 220 kDa 
EHMT2                 0.057   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.057   euchromatic histone-lysine N-methyltransferase 2 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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