Guide to the Human Genome
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Name: ANKRD55 Sequence: fasta or formatted (326aa) NCBI GI: 90186264
Description:

ankyrin repeat domain 55 isoform 2

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [614aa] ankyrin repeat domain 55 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         16           2
 C cysteine            1.5          5           1
 D aspartate           5.2         17           1
 E glutamate           5.8         19           2
 F phenylalanine       2.8          9           1
 G glycine             3.1         10           1
 H histidine           4.3         14           2
 I isoleucine          2.8          9           2
 K lysine              6.1         20           3
 L leucine             9.5         31           2
 M methionine          1.2          4           1
 N asparagine          6.7         22           2
 P proline             8.6         28           3
 Q glutamine           6.1         20           1
 R arginine            8.0         26           2
 S serine             11.3         37           3
 T threonine           5.8         19           2
 V valine              4.0         13           1
 W tryptophan          0.6          2           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 55 isoform 2 
ANKRD55               1.000   ankyrin repeat domain 55 isoform 1 
SFRS3                 0.017   splicing factor, arginine/serine-rich 3 
SFRS18                0.016   splicing factor, arginine/serine-rich 130 
SFRS18                0.016   splicing factor, arginine/serine-rich 130 
ANKRA2                0.014   ankyrin repeat, family A (RFXANK-like), 2 
MTPN                  0.012   myotrophin 
SFN                   0.012   stratifin 
ST5                   0.012   suppression of tumorigenicity 5 isoform 1 
ST5                   0.012   suppression of tumorigenicity 5 isoform 1 
SFRS2IP               0.011   splicing factor, arginine/serine-rich 2, interactin...
NR6A1                 0.011   nuclear receptor subfamily 6, group A, member 1 isof...
SMG7                  0.011   SMG-7 homolog isoform 1 
SMG7                  0.011   SMG-7 homolog isoform 4 
SMG7                  0.011   SMG-7 homolog isoform 2 
ANKK1                 0.009   ankyrin repeat and kinase domain containing 1 
TNRC6A                0.009   trinucleotide repeat containing 6A 
ODZ4                  0.009   odz, odd Oz/ten-m homolog 4 
FAM169A               0.009   hypothetical protein LOC26049 
NR6A1                 0.009   nuclear receptor subfamily 6, group A, member 1 isof...
LOC100129203          0.009   PREDICTED: similar to mCG50504 
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TRAIP                 0.009   TRAF interacting protein 
ABTB1                 0.009   ankyrin repeat and BTB (POZ) domain containing 1 iso...
AP1G2                 0.008   adaptor-related protein complex 1, gamma 2 subunit [H...
KRT7                  0.008   keratin 7 
ANK1                  0.008   ankyrin 1 isoform 9 
ANK1                  0.008   ankyrin 1 isoform 1 
ANK1                  0.008   ankyrin 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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