Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MTPN Sequence: fasta or formatted (118aa) NCBI GI: 21956645
Description:

myotrophin

Referenced in:

Ankyrin Family
Cardiovascular System

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         12           2
 C cysteine            2.5          3           1
 D aspartate           9.3         11           1
 E glutamate           6.8          8           1
 F phenylalanine       2.5          3           1
 G glycine             8.5         10           2
 H histidine           3.4          4           2
 I isoleucine          3.4          4           1
 K lysine             10.2         12           1
 L leucine            14.4         17           3
 M methionine          1.7          2           1
 N asparagine          3.4          4           1
 P proline             3.4          4           1
 Q glutamine           2.5          3           1
 R arginine            1.7          2           1
 S serine              2.5          3           1
 T threonine           4.2          5           1
 V valine              5.9          7           1
 W tryptophan          0.8          1           1
 Y tyrosine            2.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotrophin 
ANK2                  0.220   ankyrin 2 isoform 3 
ANK2                  0.220   ankyrin 2 isoform 2 
ANK2                  0.220   ankyrin 2 isoform 1 
ANKRD28               0.206   ankyrin repeat domain 28 
TNKS2                 0.193   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.193   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
BARD1                 0.193   BRCA1 associated RING domain 1 
ANK3                  0.188   ankyrin 3 isoform 1 
KIDINS220             0.188   kinase D-interacting substrate of 220 kDa 
TANC1                 0.183   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.183   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD31               0.183   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.183   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.183   PREDICTED: ankyrin repeat domain 31 
ANKRA2                0.183   ankyrin repeat, family A (RFXANK-like), 2 
RNASEL                0.174   ribonuclease L 
ANKRD39               0.174   ankyrin repeat domain 39 
PPP1R12A              0.174   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.174   protein phosphatase 1, regulatory (inhibitor) subunit...
ANKHD1                0.174   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.174   ANKHD1-EIF4EBP3 protein 
ANKRD17               0.170   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.170   ankyrin repeat domain protein 17 isoform b 
ANKRD44               0.170   ankyrin repeat domain 44 
USH1G                 0.165   Usher syndrome 1G protein 
ANKS6                 0.161   ankyrin repeat and sterile alpha motif domain contai...
EHMT1                 0.161   euchromatic histone-lysine N-methyltransferase 1 is...
RFXANK                0.156   regulatory factor X-associated ankyrin-containing pro...
ACBD6                 0.156   acyl-coenzyme A binding domain containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press