BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sapiens] (179 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sa... 369 e-103 gi|223890205 mouse double minute 2 homolog isoform MDM2h [Homo s... 204 4e-53 gi|89993693 mouse double minute 2 homolog isoform MDM2d [Homo sa... 204 4e-53 gi|89993690 mouse double minute 2 homolog isoform MDM2a [Homo sa... 204 4e-53 gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo sap... 204 4e-53 gi|223890201 mouse double minute 2 homolog isoform MDM2g [Homo s... 193 8e-50 gi|89993692 mouse double minute 2 homolog isoform MDM2b [Homo sa... 178 3e-45 gi|223890207 mouse double minute 2 homolog isoform MDM2i [Homo s... 175 2e-44 gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo s... 175 2e-44 gi|88702791 mouse double minute 4 homolog [Homo sapiens] 91 4e-19 gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 42 2e-04 gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 42 2e-04 gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 42 2e-04 gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 42 2e-04 gi|58743365 ring finger protein 157 [Homo sapiens] 42 2e-04 gi|223278368 neuralized-like [Homo sapiens] 42 3e-04 gi|217416388 neuralized homolog 1B [Homo sapiens] 39 0.003 gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa... 38 0.005 gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ... 37 0.007 gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 36 0.015 gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 36 0.015 gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 36 0.015 gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 36 0.015 gi|53729363 leucine rich repeat and sterile alpha motif containi... 35 0.034 gi|53729361 leucine rich repeat and sterile alpha motif containi... 35 0.034 gi|53729359 leucine rich repeat and sterile alpha motif containi... 35 0.034 gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 34 0.059 gi|30348954 mindbomb homolog 1 [Homo sapiens] 34 0.059 gi|62865649 rififylin [Homo sapiens] 33 0.13 gi|17432433 rififylin [Homo sapiens] 33 0.13 >gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sapiens] Length = 179 Score = 369 bits (947), Expect = e-103 Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL Sbjct: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 Query: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPL 120 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPL Sbjct: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPL 120 Query: 121 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP 179 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP Sbjct: 121 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP 179 >gi|223890205 mouse double minute 2 homolog isoform MDM2h [Homo sapiens] Length = 442 Score = 204 bits (518), Expect = 4e-53 Identities = 101/104 (97%), Positives = 102/104 (98%) Query: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL Sbjct: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 Query: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE + Sbjct: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104 Score = 175 bits (444), Expect = 2e-44 Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 99 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK Sbjct: 362 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 421 Query: 159 RNKPCPVCRQPIQMIVLTYFP 179 RNKPCPVCRQPIQMIVLTYFP Sbjct: 422 RNKPCPVCRQPIQMIVLTYFP 442 >gi|89993693 mouse double minute 2 homolog isoform MDM2d [Homo sapiens] Length = 172 Score = 204 bits (518), Expect = 4e-53 Identities = 101/104 (97%), Positives = 102/104 (98%) Query: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL Sbjct: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 Query: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE + Sbjct: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104 >gi|89993690 mouse double minute 2 homolog isoform MDM2a [Homo sapiens] Length = 249 Score = 204 bits (518), Expect = 4e-53 Identities = 101/104 (97%), Positives = 102/104 (98%) Query: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL Sbjct: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 Query: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE + Sbjct: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104 Score = 165 bits (418), Expect = 2e-41 Identities = 76/77 (98%), Positives = 76/77 (98%) Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162 E EETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP Sbjct: 173 ETEETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 232 Query: 163 CPVCRQPIQMIVLTYFP 179 CPVCRQPIQMIVLTYFP Sbjct: 233 CPVCRQPIQMIVLTYFP 249 >gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo sapiens] Length = 497 Score = 204 bits (518), Expect = 4e-53 Identities = 101/104 (97%), Positives = 102/104 (98%) Query: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL Sbjct: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 Query: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE + Sbjct: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104 Score = 175 bits (444), Expect = 2e-44 Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 99 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK Sbjct: 417 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 476 Query: 159 RNKPCPVCRQPIQMIVLTYFP 179 RNKPCPVCRQPIQMIVLTYFP Sbjct: 477 RNKPCPVCRQPIQMIVLTYFP 497 >gi|223890201 mouse double minute 2 homolog isoform MDM2g [Homo sapiens] Length = 444 Score = 193 bits (490), Expect = 8e-50 Identities = 95/98 (96%), Positives = 96/98 (97%) Query: 7 MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY 66 MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY Sbjct: 1 MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY 60 Query: 67 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE + Sbjct: 61 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 98 Score = 175 bits (444), Expect = 2e-44 Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 99 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK Sbjct: 364 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 423 Query: 159 RNKPCPVCRQPIQMIVLTYFP 179 RNKPCPVCRQPIQMIVLTYFP Sbjct: 424 RNKPCPVCRQPIQMIVLTYFP 444 >gi|89993692 mouse double minute 2 homolog isoform MDM2b [Homo sapiens] Length = 111 Score = 178 bits (451), Expect = 3e-45 Identities = 90/101 (89%), Positives = 94/101 (93%), Gaps = 1/101 (0%) Query: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL Sbjct: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 Query: 61 FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE 101 FYLGQYIMTKRLYDEKQQHIVYCSND +LF + S++E Sbjct: 61 FYLGQYIMTKRLYDEKQQHIVYCSND-CANLFPLVDLSIRE 100 >gi|223890207 mouse double minute 2 homolog isoform MDM2i [Homo sapiens] Length = 295 Score = 175 bits (444), Expect = 2e-44 Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 99 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK Sbjct: 215 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 274 Query: 159 RNKPCPVCRQPIQMIVLTYFP 179 RNKPCPVCRQPIQMIVLTYFP Sbjct: 275 RNKPCPVCRQPIQMIVLTYFP 295 Score = 106 bits (264), Expect = 1e-23 Identities = 65/111 (58%), Positives = 73/111 (65%), Gaps = 12/111 (10%) Query: 7 MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY 66 MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKE L Sbjct: 1 MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEDL----DA 56 Query: 67 IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESS 117 +++ D + D + D F V F V+ + E+ EE E S Sbjct: 57 GVSEHSGD-------WLDQDSVSDQFSV-EFEVESLDSEDYSLSEEGQELS 99 >gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo sapiens] Length = 452 Score = 175 bits (444), Expect = 2e-44 Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 99 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK Sbjct: 372 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 431 Query: 159 RNKPCPVCRQPIQMIVLTYFP 179 RNKPCPVCRQPIQMIVLTYFP Sbjct: 432 RNKPCPVCRQPIQMIVLTYFP 452 Score = 117 bits (293), Expect = 5e-27 Identities = 58/61 (95%), Positives = 60/61 (98%) Query: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKE + Sbjct: 1 MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEKI 60 Query: 61 F 61 + Sbjct: 61 Y 61 >gi|88702791 mouse double minute 4 homolog [Homo sapiens] Length = 490 Score = 91.3 bits (225), Expect = 4e-19 Identities = 42/68 (61%), Positives = 55/68 (80%) Query: 34 VRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFG 93 VRPK LLK+L + GAQ + +T+KEV+ YLGQYIM K+LYD+++QH+VYC DLLG+L G Sbjct: 27 VRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLG 86 Query: 94 VPSFSVKE 101 SFSVK+ Sbjct: 87 RQSFSVKD 94 Score = 77.4 bits (189), Expect = 6e-15 Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 6/75 (8%) Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162 +R +T++ E+ N ++PC +C+ RP++G I+HG+TGHL+ CF CA++LKK Sbjct: 420 QRTDTENMEDCQ------NLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGAS 473 Query: 163 CPVCRQPIQMIVLTY 177 CP+C++ IQ+++ + Sbjct: 474 CPICKKEIQLVIKVF 488 >gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] Length = 531 Score = 42.4 bits (98), Expect = 2e-04 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%) Query: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135 KQ+ IV + LL +++G+ + + +E + + ++ + S E CV+C ++ Sbjct: 239 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 288 Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174 I+ + HL C +CA L+ + CP+CR P + ++ Sbjct: 289 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 325 >gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] Length = 552 Score = 42.4 bits (98), Expect = 2e-04 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%) Query: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135 KQ+ IV + LL +++G+ + + +E + + ++ + S E CV+C ++ Sbjct: 238 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 287 Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174 I+ + HL C +CA L+ + CP+CR P + ++ Sbjct: 288 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 324 >gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] Length = 555 Score = 42.4 bits (98), Expect = 2e-04 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%) Query: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135 KQ+ IV + LL +++G+ + + +E + + ++ + S E CV+C ++ Sbjct: 239 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 288 Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174 I+ + HL C +CA L+ + CP+CR P + ++ Sbjct: 289 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 325 >gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] Length = 576 Score = 42.4 bits (98), Expect = 2e-04 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%) Query: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135 KQ+ IV + LL +++G+ + + +E + + ++ + S E CV+C ++ Sbjct: 238 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 287 Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174 I+ + HL C +CA L+ + CP+CR P + ++ Sbjct: 288 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 324 >gi|58743365 ring finger protein 157 [Homo sapiens] Length = 679 Score = 42.4 bits (98), Expect = 2e-04 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 11/99 (11%) Query: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135 KQ+ +V + LL +++G+ + + TQD + + E + N+ E CV+C ++ Sbjct: 236 KQKQVVDGVSYLLQEIYGIEN-------KYNTQDSKVA-EDEVSDNSAE-CVVCLSDVRD 286 Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174 I+ + HL C TCA L+ + CP+CR P + ++ Sbjct: 287 TLILPCR--HLCLCNTCADTLRYQANNCPICRLPFRALL 323 >gi|223278368 neuralized-like [Homo sapiens] Length = 574 Score = 42.0 bits (97), Expect = 3e-04 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Query: 117 SLPLNAIEP--------CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKR-NKPCPVCR 167 SLP + + P C IC + I GH+ C+ C +LKK + CP+CR Sbjct: 504 SLPESPVTPGLGQWSDECTICYEHAVDTVIY--TCGHMCLCYACGLRLKKALHACCPICR 561 Query: 168 QPIQMIVLTY 177 +PI+ I+ TY Sbjct: 562 RPIKDIIKTY 571 >gi|217416388 neuralized homolog 1B [Homo sapiens] Length = 555 Score = 38.5 bits (88), Expect = 0.003 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 144 GHLMACFTCAKKLKKRNKPC-PVCRQPIQMIVLTYFP 179 GH+ C +C +LK++ + C P+CR+PI+ ++ Y P Sbjct: 519 GHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYRP 555 >gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sapiens] Length = 497 Score = 37.7 bits (86), Expect = 0.005 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 87 LLGDLFGVPSFSVKEFEREETQDKEESVESSLP-LNAIEPCVICQGRPKNGCIVHGKTGH 145 L+ DL S+++ + + KE S E L L + C IC R N IV GH Sbjct: 410 LVADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDR--NIAIVFVPCGH 467 Query: 146 LMACFTCAKKLKKRNKPCPVC 166 L+ C CA+ + K CP+C Sbjct: 468 LVTCKQCAEAVDK----CPMC 484 >gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 [Homo sapiens] Length = 352 Score = 37.4 bits (85), Expect = 0.007 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 18/85 (21%) Query: 100 KEFEREETQ-------DKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTC 152 +EF+ E Q + ES++S+ CV+C K+ V + GH+ +C C Sbjct: 277 EEFQEHEAQLLSRAKPEDRESLKSA--------CVVCLSSFKS--CVFLECGHVCSCTEC 326 Query: 153 AKKLKKRNKPCPVCRQPIQMIVLTY 177 + L + K CP+CRQ I ++ Y Sbjct: 327 YRALPEPKK-CPICRQAITRVIPLY 350 >gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 36.2 bits (82), Expect = 0.015 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177 C +C K IV GHL+ C CA L+K CP+CR I+ V T+ Sbjct: 557 CKVCMD--KEVSIVFIPCGHLVVCKDCAPSLRK----CPICRSTIKGTVRTF 602 >gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 36.2 bits (82), Expect = 0.015 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177 C +C K IV GHL+ C CA L+K CP+CR I+ V T+ Sbjct: 557 CKVCMD--KEVSIVFIPCGHLVVCKDCAPSLRK----CPICRSTIKGTVRTF 602 >gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] Length = 373 Score = 36.2 bits (82), Expect = 0.015 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 16/66 (24%) Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162 ER + QD+E+ + ++A+ CV+ + GH++ C C K++ + Sbjct: 313 ERLQLQDEEDDSLCRICMDAVIDCVLLE------------CGHMVTCTKCGKRMSE---- 356 Query: 163 CPVCRQ 168 CP+CRQ Sbjct: 357 CPICRQ 362 >gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] Length = 372 Score = 36.2 bits (82), Expect = 0.015 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 16/66 (24%) Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162 ER + QD+E+ + ++A+ CV+ + GH++ C C K++ + Sbjct: 312 ERLQLQDEEDDSLCRICMDAVIDCVLLE------------CGHMVTCTKCGKRMSE---- 355 Query: 163 CPVCRQ 168 CP+CRQ Sbjct: 356 CPICRQ 361 >gi|53729363 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 35.0 bits (79), Expect = 0.034 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Query: 108 QDKEESVESSLPLNAIE----PCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPC 163 Q+ ESV S P +E CV+C R ++ GH+ C C + L+ C Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQ--MIFLNCGHVCCCQQCCQPLRT----C 706 Query: 164 PVCRQPIQMIVLTY 177 P+CRQ I + Y Sbjct: 707 PLCRQDIAQRLRIY 720 >gi|53729361 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 35.0 bits (79), Expect = 0.034 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Query: 108 QDKEESVESSLPLNAIE----PCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPC 163 Q+ ESV S P +E CV+C R ++ GH+ C C + L+ C Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQ--MIFLNCGHVCCCQQCCQPLRT----C 706 Query: 164 PVCRQPIQMIVLTY 177 P+CRQ I + Y Sbjct: 707 PLCRQDIAQRLRIY 720 >gi|53729359 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 35.0 bits (79), Expect = 0.034 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Query: 108 QDKEESVESSLPLNAIE----PCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPC 163 Q+ ESV S P +E CV+C R ++ GH+ C C + L+ C Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQ--MIFLNCGHVCCCQQCCQPLRT----C 706 Query: 164 PVCRQPIQMIVLTY 177 P+CRQ I + Y Sbjct: 707 PLCRQDIAQRLRIY 720 >gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sapiens] Length = 618 Score = 34.3 bits (77), Expect = 0.059 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177 C +C K +V GHL+ C CA L+K CP+CR I+ V T+ Sbjct: 571 CKVCMD--KEVSVVFIPCGHLVVCQECAPSLRK----CPICRGIIKGTVRTF 616 >gi|30348954 mindbomb homolog 1 [Homo sapiens] Length = 1006 Score = 34.3 bits (77), Expect = 0.059 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 123 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 171 IE CV+C K ++ GH+ AC CA +KK C CR ++ Sbjct: 863 IEECVVCSD--KKAAVLFQPCGHMCACENCANLMKK----CVQCRAVVE 905 Score = 33.5 bits (75), Expect = 0.100 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Query: 123 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 171 +E C++C ++ + G GH+ C C+ ++KK C +C++ +Q Sbjct: 816 LEECMVCSDMKRD--TLFGPCGHIATCSLCSPRVKK----CLICKEQVQ 858 Score = 28.5 bits (62), Expect = 3.2 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 8/52 (15%) Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177 C +C R KN + G C C ++ + CP+CR+ I+ +L Y Sbjct: 963 CPVCLDRLKNMIFLCGHG----TCQLCGDRMSE----CPICRKAIERRILLY 1006 >gi|62865649 rififylin [Homo sapiens] Length = 363 Score = 33.1 bits (74), Expect = 0.13 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 6/43 (13%) Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQ 168 C IC P + ++ + GH++ C C K++ + CP+CRQ Sbjct: 316 CKICMDSPIDCVLL--ECGHMVTCTKCGKRMNE----CPICRQ 352 >gi|17432433 rififylin [Homo sapiens] Length = 363 Score = 33.1 bits (74), Expect = 0.13 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 6/43 (13%) Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQ 168 C IC P + ++ + GH++ C C K++ + CP+CRQ Sbjct: 316 CKICMDSPIDCVLL--ECGHMVTCTKCGKRMNE----CPICRQ 352 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.135 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,000,815 Number of Sequences: 37866 Number of extensions: 311153 Number of successful extensions: 970 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 47 Number of HSP's that attempted gapping in prelim test: 922 Number of HSP's gapped (non-prelim): 80 length of query: 179 length of database: 18,247,518 effective HSP length: 96 effective length of query: 83 effective length of database: 14,612,382 effective search space: 1212827706 effective search space used: 1212827706 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.