Search of human proteins with 89993691

Search of human proteins with 89993691

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo
sapiens]
         (179 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sa...   369   e-103
gi|223890205 mouse double minute 2 homolog isoform MDM2h [Homo s...   204   4e-53
gi|89993693 mouse double minute 2 homolog isoform MDM2d [Homo sa...   204   4e-53
gi|89993690 mouse double minute 2 homolog isoform MDM2a [Homo sa...   204   4e-53
gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo sap...   204   4e-53
gi|223890201 mouse double minute 2 homolog isoform MDM2g [Homo s...   193   8e-50
gi|89993692 mouse double minute 2 homolog isoform MDM2b [Homo sa...   178   3e-45
gi|223890207 mouse double minute 2 homolog isoform MDM2i [Homo s...   175   2e-44
gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo s...   175   2e-44
gi|88702791 mouse double minute 4 homolog [Homo sapiens]               91   4e-19
gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens]         42   2e-04
gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens]         42   2e-04
gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]         42   2e-04
gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens]          42   2e-04
gi|58743365 ring finger protein 157 [Homo sapiens]                     42   2e-04
gi|223278368 neuralized-like [Homo sapiens]                            42   3e-04
gi|217416388 neuralized homolog 1B [Homo sapiens]                      39   0.003
gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa...    38   0.005
gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ...    37   0.007
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa...    36   0.015
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap...    36   0.015
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]            36   0.015
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]            36   0.015
gi|53729363 leucine rich repeat and sterile alpha motif containi...    35   0.034
gi|53729361 leucine rich repeat and sterile alpha motif containi...    35   0.034
gi|53729359 leucine rich repeat and sterile alpha motif containi...    35   0.034
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap...    34   0.059
gi|30348954 mindbomb homolog 1 [Homo sapiens]                          34   0.059
gi|62865649 rififylin [Homo sapiens]                                   33   0.13 
gi|17432433 rififylin [Homo sapiens]                                   33   0.13 

>gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo
           sapiens]
          Length = 179

 Score =  369 bits (947), Expect = e-103
 Identities = 179/179 (100%), Positives = 179/179 (100%)

Query: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60
           MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL
Sbjct: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60

Query: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPL 120
           FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPL
Sbjct: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPL 120

Query: 121 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP 179
           NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP
Sbjct: 121 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP 179


>gi|223890205 mouse double minute 2 homolog isoform MDM2h [Homo
           sapiens]
          Length = 442

 Score =  204 bits (518), Expect = 4e-53
 Identities = 101/104 (97%), Positives = 102/104 (98%)

Query: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60
           MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL
Sbjct: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60

Query: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104
           FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE  +
Sbjct: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104



 Score =  175 bits (444), Expect = 2e-44
 Identities = 81/81 (100%), Positives = 81/81 (100%)

Query: 99  VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158
           VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK
Sbjct: 362 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 421

Query: 159 RNKPCPVCRQPIQMIVLTYFP 179
           RNKPCPVCRQPIQMIVLTYFP
Sbjct: 422 RNKPCPVCRQPIQMIVLTYFP 442


>gi|89993693 mouse double minute 2 homolog isoform MDM2d [Homo
           sapiens]
          Length = 172

 Score =  204 bits (518), Expect = 4e-53
 Identities = 101/104 (97%), Positives = 102/104 (98%)

Query: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60
           MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL
Sbjct: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60

Query: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104
           FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE  +
Sbjct: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104


>gi|89993690 mouse double minute 2 homolog isoform MDM2a [Homo
           sapiens]
          Length = 249

 Score =  204 bits (518), Expect = 4e-53
 Identities = 101/104 (97%), Positives = 102/104 (98%)

Query: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60
           MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL
Sbjct: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60

Query: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104
           FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE  +
Sbjct: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104



 Score =  165 bits (418), Expect = 2e-41
 Identities = 76/77 (98%), Positives = 76/77 (98%)

Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162
           E EETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP
Sbjct: 173 ETEETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 232

Query: 163 CPVCRQPIQMIVLTYFP 179
           CPVCRQPIQMIVLTYFP
Sbjct: 233 CPVCRQPIQMIVLTYFP 249


>gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo
           sapiens]
          Length = 497

 Score =  204 bits (518), Expect = 4e-53
 Identities = 101/104 (97%), Positives = 102/104 (98%)

Query: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60
           MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL
Sbjct: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60

Query: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104
           FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE  +
Sbjct: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 104



 Score =  175 bits (444), Expect = 2e-44
 Identities = 81/81 (100%), Positives = 81/81 (100%)

Query: 99  VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158
           VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK
Sbjct: 417 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 476

Query: 159 RNKPCPVCRQPIQMIVLTYFP 179
           RNKPCPVCRQPIQMIVLTYFP
Sbjct: 477 RNKPCPVCRQPIQMIVLTYFP 497


>gi|223890201 mouse double minute 2 homolog isoform MDM2g [Homo
           sapiens]
          Length = 444

 Score =  193 bits (490), Expect = 8e-50
 Identities = 95/98 (96%), Positives = 96/98 (97%)

Query: 7   MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY 66
           MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY
Sbjct: 1   MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY 60

Query: 67  IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER 104
           IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE  +
Sbjct: 61  IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK 98



 Score =  175 bits (444), Expect = 2e-44
 Identities = 81/81 (100%), Positives = 81/81 (100%)

Query: 99  VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158
           VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK
Sbjct: 364 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 423

Query: 159 RNKPCPVCRQPIQMIVLTYFP 179
           RNKPCPVCRQPIQMIVLTYFP
Sbjct: 424 RNKPCPVCRQPIQMIVLTYFP 444


>gi|89993692 mouse double minute 2 homolog isoform MDM2b [Homo
           sapiens]
          Length = 111

 Score =  178 bits (451), Expect = 3e-45
 Identities = 90/101 (89%), Positives = 94/101 (93%), Gaps = 1/101 (0%)

Query: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60
           MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL
Sbjct: 1   MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60

Query: 61  FYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKE 101
           FYLGQYIMTKRLYDEKQQHIVYCSND   +LF +   S++E
Sbjct: 61  FYLGQYIMTKRLYDEKQQHIVYCSND-CANLFPLVDLSIRE 100


>gi|223890207 mouse double minute 2 homolog isoform MDM2i [Homo
           sapiens]
          Length = 295

 Score =  175 bits (444), Expect = 2e-44
 Identities = 81/81 (100%), Positives = 81/81 (100%)

Query: 99  VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158
           VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK
Sbjct: 215 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 274

Query: 159 RNKPCPVCRQPIQMIVLTYFP 179
           RNKPCPVCRQPIQMIVLTYFP
Sbjct: 275 RNKPCPVCRQPIQMIVLTYFP 295



 Score =  106 bits (264), Expect = 1e-23
 Identities = 65/111 (58%), Positives = 73/111 (65%), Gaps = 12/111 (10%)

Query: 7   MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY 66
           MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKE L      
Sbjct: 1   MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEDL----DA 56

Query: 67  IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESS 117
            +++   D       +   D + D F V  F V+  + E+    EE  E S
Sbjct: 57  GVSEHSGD-------WLDQDSVSDQFSV-EFEVESLDSEDYSLSEEGQELS 99


>gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo
           sapiens]
          Length = 452

 Score =  175 bits (444), Expect = 2e-44
 Identities = 81/81 (100%), Positives = 81/81 (100%)

Query: 99  VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 158
           VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK
Sbjct: 372 VKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK 431

Query: 159 RNKPCPVCRQPIQMIVLTYFP 179
           RNKPCPVCRQPIQMIVLTYFP
Sbjct: 432 RNKPCPVCRQPIQMIVLTYFP 452



 Score =  117 bits (293), Expect = 5e-27
 Identities = 58/61 (95%), Positives = 60/61 (98%)

Query: 1  MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVL 60
          MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKE +
Sbjct: 1  MVRSRQMCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEKI 60

Query: 61 F 61
          +
Sbjct: 61 Y 61


>gi|88702791 mouse double minute 4 homolog [Homo sapiens]
          Length = 490

 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 42/68 (61%), Positives = 55/68 (80%)

Query: 34  VRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFG 93
           VRPK  LLK+L + GAQ + +T+KEV+ YLGQYIM K+LYD+++QH+VYC  DLLG+L G
Sbjct: 27  VRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLG 86

Query: 94  VPSFSVKE 101
             SFSVK+
Sbjct: 87  RQSFSVKD 94



 Score = 77.4 bits (189), Expect = 6e-15
 Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 6/75 (8%)

Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162
           +R +T++ E+        N ++PC +C+ RP++G I+HG+TGHL+ CF CA++LKK    
Sbjct: 420 QRTDTENMEDCQ------NLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGAS 473

Query: 163 CPVCRQPIQMIVLTY 177
           CP+C++ IQ+++  +
Sbjct: 474 CPICKKEIQLVIKVF 488


>gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens]
          Length = 531

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 76  KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135
           KQ+ IV   + LL +++G+ + + +E +  + ++ + S E          CV+C    ++
Sbjct: 239 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 288

Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174
             I+  +  HL  C +CA  L+ +   CP+CR P + ++
Sbjct: 289 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 325


>gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens]
          Length = 552

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 76  KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135
           KQ+ IV   + LL +++G+ + + +E +  + ++ + S E          CV+C    ++
Sbjct: 238 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 287

Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174
             I+  +  HL  C +CA  L+ +   CP+CR P + ++
Sbjct: 288 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 324


>gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]
          Length = 555

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 76  KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135
           KQ+ IV   + LL +++G+ + + +E +  + ++ + S E          CV+C    ++
Sbjct: 239 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 288

Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174
             I+  +  HL  C +CA  L+ +   CP+CR P + ++
Sbjct: 289 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 325


>gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens]
          Length = 576

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 76  KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135
           KQ+ IV   + LL +++G+ + + +E +  + ++ + S E          CV+C    ++
Sbjct: 238 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 287

Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174
             I+  +  HL  C +CA  L+ +   CP+CR P + ++
Sbjct: 288 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 324


>gi|58743365 ring finger protein 157 [Homo sapiens]
          Length = 679

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 11/99 (11%)

Query: 76  KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135
           KQ+ +V   + LL +++G+ +       +  TQD + + E  +  N+ E CV+C    ++
Sbjct: 236 KQKQVVDGVSYLLQEIYGIEN-------KYNTQDSKVA-EDEVSDNSAE-CVVCLSDVRD 286

Query: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174
             I+  +  HL  C TCA  L+ +   CP+CR P + ++
Sbjct: 287 TLILPCR--HLCLCNTCADTLRYQANNCPICRLPFRALL 323


>gi|223278368 neuralized-like [Homo sapiens]
          Length = 574

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 11/70 (15%)

Query: 117 SLPLNAIEP--------CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKR-NKPCPVCR 167
           SLP + + P        C IC     +  I     GH+  C+ C  +LKK  +  CP+CR
Sbjct: 504 SLPESPVTPGLGQWSDECTICYEHAVDTVIY--TCGHMCLCYACGLRLKKALHACCPICR 561

Query: 168 QPIQMIVLTY 177
           +PI+ I+ TY
Sbjct: 562 RPIKDIIKTY 571


>gi|217416388 neuralized homolog 1B [Homo sapiens]
          Length = 555

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 144 GHLMACFTCAKKLKKRNKPC-PVCRQPIQMIVLTYFP 179
           GH+  C +C  +LK++ + C P+CR+PI+ ++  Y P
Sbjct: 519 GHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYRP 555


>gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo
           sapiens]
          Length = 497

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 87  LLGDLFGVPSFSVKEFEREETQDKEESVESSLP-LNAIEPCVICQGRPKNGCIVHGKTGH 145
           L+ DL      S+++   + +  KE S E  L  L   + C IC  R  N  IV    GH
Sbjct: 410 LVADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDR--NIAIVFVPCGH 467

Query: 146 LMACFTCAKKLKKRNKPCPVC 166
           L+ C  CA+ + K    CP+C
Sbjct: 468 LVTCKQCAEAVDK----CPMC 484


>gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1
           [Homo sapiens]
          Length = 352

 Score = 37.4 bits (85), Expect = 0.007
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 18/85 (21%)

Query: 100 KEFEREETQ-------DKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTC 152
           +EF+  E Q       +  ES++S+        CV+C    K+   V  + GH+ +C  C
Sbjct: 277 EEFQEHEAQLLSRAKPEDRESLKSA--------CVVCLSSFKS--CVFLECGHVCSCTEC 326

Query: 153 AKKLKKRNKPCPVCRQPIQMIVLTY 177
            + L +  K CP+CRQ I  ++  Y
Sbjct: 327 YRALPEPKK-CPICRQAITRVIPLY 350


>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
           sapiens]
          Length = 604

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177
           C +C    K   IV    GHL+ C  CA  L+K    CP+CR  I+  V T+
Sbjct: 557 CKVCMD--KEVSIVFIPCGHLVVCKDCAPSLRK----CPICRSTIKGTVRTF 602


>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
           sapiens]
          Length = 604

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177
           C +C    K   IV    GHL+ C  CA  L+K    CP+CR  I+  V T+
Sbjct: 557 CKVCMD--KEVSIVFIPCGHLVVCKDCAPSLRK----CPICRSTIKGTVRTF 602


>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
          Length = 373

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 16/66 (24%)

Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162
           ER + QD+E+     + ++A+  CV+ +             GH++ C  C K++ +    
Sbjct: 313 ERLQLQDEEDDSLCRICMDAVIDCVLLE------------CGHMVTCTKCGKRMSE---- 356

Query: 163 CPVCRQ 168
           CP+CRQ
Sbjct: 357 CPICRQ 362


>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
          Length = 372

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 16/66 (24%)

Query: 103 EREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKP 162
           ER + QD+E+     + ++A+  CV+ +             GH++ C  C K++ +    
Sbjct: 312 ERLQLQDEEDDSLCRICMDAVIDCVLLE------------CGHMVTCTKCGKRMSE---- 355

Query: 163 CPVCRQ 168
           CP+CRQ
Sbjct: 356 CPICRQ 361


>gi|53729363 leucine rich repeat and sterile alpha motif containing
           1 [Homo sapiens]
          Length = 723

 Score = 35.0 bits (79), Expect = 0.034
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 108 QDKEESVESSLPLNAIE----PCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPC 163
           Q+  ESV  S P   +E     CV+C  R     ++    GH+  C  C + L+     C
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQ--MIFLNCGHVCCCQQCCQPLRT----C 706

Query: 164 PVCRQPIQMIVLTY 177
           P+CRQ I   +  Y
Sbjct: 707 PLCRQDIAQRLRIY 720


>gi|53729361 leucine rich repeat and sterile alpha motif containing
           1 [Homo sapiens]
          Length = 723

 Score = 35.0 bits (79), Expect = 0.034
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 108 QDKEESVESSLPLNAIE----PCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPC 163
           Q+  ESV  S P   +E     CV+C  R     ++    GH+  C  C + L+     C
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQ--MIFLNCGHVCCCQQCCQPLRT----C 706

Query: 164 PVCRQPIQMIVLTY 177
           P+CRQ I   +  Y
Sbjct: 707 PLCRQDIAQRLRIY 720


>gi|53729359 leucine rich repeat and sterile alpha motif containing
           1 [Homo sapiens]
          Length = 723

 Score = 35.0 bits (79), Expect = 0.034
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 108 QDKEESVESSLPLNAIE----PCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPC 163
           Q+  ESV  S P   +E     CV+C  R     ++    GH+  C  C + L+     C
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQ--MIFLNCGHVCCCQQCCQPLRT----C 706

Query: 164 PVCRQPIQMIVLTY 177
           P+CRQ I   +  Y
Sbjct: 707 PLCRQDIAQRLRIY 720


>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
           sapiens]
          Length = 618

 Score = 34.3 bits (77), Expect = 0.059
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177
           C +C    K   +V    GHL+ C  CA  L+K    CP+CR  I+  V T+
Sbjct: 571 CKVCMD--KEVSVVFIPCGHLVVCQECAPSLRK----CPICRGIIKGTVRTF 616


>gi|30348954 mindbomb homolog 1 [Homo sapiens]
          Length = 1006

 Score = 34.3 bits (77), Expect = 0.059
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 123 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 171
           IE CV+C    K   ++    GH+ AC  CA  +KK    C  CR  ++
Sbjct: 863 IEECVVCSD--KKAAVLFQPCGHMCACENCANLMKK----CVQCRAVVE 905



 Score = 33.5 bits (75), Expect = 0.100
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 6/49 (12%)

Query: 123 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 171
           +E C++C    ++   + G  GH+  C  C+ ++KK    C +C++ +Q
Sbjct: 816 LEECMVCSDMKRD--TLFGPCGHIATCSLCSPRVKK----CLICKEQVQ 858



 Score = 28.5 bits (62), Expect = 3.2
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 8/52 (15%)

Query: 126  CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 177
            C +C  R KN   + G       C  C  ++ +    CP+CR+ I+  +L Y
Sbjct: 963  CPVCLDRLKNMIFLCGHG----TCQLCGDRMSE----CPICRKAIERRILLY 1006


>gi|62865649 rififylin [Homo sapiens]
          Length = 363

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 6/43 (13%)

Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQ 168
           C IC   P +  ++  + GH++ C  C K++ +    CP+CRQ
Sbjct: 316 CKICMDSPIDCVLL--ECGHMVTCTKCGKRMNE----CPICRQ 352


>gi|17432433 rififylin [Homo sapiens]
          Length = 363

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 6/43 (13%)

Query: 126 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQ 168
           C IC   P +  ++  + GH++ C  C K++ +    CP+CRQ
Sbjct: 316 CKICMDSPIDCVLL--ECGHMVTCTKCGKRMNE----CPICRQ 352


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,000,815
Number of Sequences: 37866
Number of extensions: 311153
Number of successful extensions: 970
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 922
Number of HSP's gapped (non-prelim): 80
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.