Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RNF34 Sequence: fasta or formatted (372aa) NCBI GI: 37595537
Description:

ring finger protein 34 isoform 2

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt prot [373aa] ring finger protein 34 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         20           2
 C cysteine            6.2         23           2
 D aspartate           8.3         31           7
 E glutamate           8.1         30           3
 F phenylalanine       4.0         15           2
 G glycine             5.4         20           1
 H histidine           1.6          6           2
 I isoleucine          2.4          9           1
 K lysine              4.8         18           2
 L leucine             8.3         31           2
 M methionine          3.0         11           1
 N asparagine          4.0         15           1
 P proline             3.2         12           2
 Q glutamine           4.6         17           2
 R arginine            6.5         24           2
 S serine              9.9         37           2
 T threonine           5.1         19           1
 V valine              6.7         25           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 34 isoform 2 
RNF34                 0.997   ring finger protein 34 isoform 1 
RFFL                  0.344   rififylin 
RFFL                  0.344   rififylin 
MUL1                  0.050   mitochondrial ubiquitin ligase activator of NFKB 1 ...
BIRC8                 0.046   baculoviral IAP repeat-containing 8 
XIAP                  0.046   baculoviral IAP repeat-containing protein 4 
BIRC2                 0.043   baculoviral IAP repeat-containing protein 2 
MIB1                  0.043   mindbomb homolog 1 
BIRC3                 0.043   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.043   baculoviral IAP repeat-containing protein 3 
BIRC7                 0.034   livin inhibitor of apoptosis isoform beta 
BIRC7                 0.034   livin inhibitor of apoptosis isoform alpha 
MYLIP                 0.032   myosin regulatory light chain interacting protein [H...
CGRRF1                0.032   cell growth regulator with ring finger domain 1 [Homo...
NEURL1B               0.032   neuralized homolog 1B 
NEURL                 0.030   neuralized-like 
RNF8                  0.030   ring finger protein 8 isoform 1 
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
ATAD2                 0.027   ATPase family, AAA domain containing 2 
RSPRY1                0.027   ring finger and SPRY domain containing 1 
MEX3B                 0.026   mex-3 homolog B 
MIB2                  0.026   mindbomb homolog 2 
MEX3D                 0.026   ring finger and KH domain containing 1 
MGRN1                 0.023   mahogunin, ring finger 1 isoform 4 
MGRN1                 0.023   mahogunin, ring finger 1 isoform 3 
MGRN1                 0.023   mahogunin, ring finger 1 isoform 2 
MGRN1                 0.023   mahogunin, ring finger 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press