Guide to the Human Genome
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Name: XIAP Sequence: fasta or formatted (497aa) NCBI GI: 32528299
Description:

baculoviral IAP repeat-containing protein 4

Referenced in:

Protease Inhibitors
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         30           2
 C cysteine            4.0         20           2
 D aspartate           5.2         26           2
 E glutamate           7.4         37           3
 F phenylalanine       5.4         27           2
 G glycine             6.0         30           3
 H histidine           2.4         12           1
 I isoleucine          4.8         24           1
 K lysine              5.8         29           2
 L leucine             6.6         33           2
 M methionine          2.0         10           1
 N asparagine          5.4         27           2
 P proline             4.2         21           1
 Q glutamine           4.6         23           1
 R arginine            5.8         29           2
 S serine              7.8         39           2
 T threonine           5.6         28           2
 V valine              5.0         25           2
 W tryptophan          1.6          8           1
 Y tyrosine            3.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   baculoviral IAP repeat-containing protein 4 
BIRC8                 0.379   baculoviral IAP repeat-containing 8 
BIRC3                 0.256   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.256   baculoviral IAP repeat-containing protein 3 
BIRC2                 0.253   baculoviral IAP repeat-containing protein 2 
BIRC7                 0.121   livin inhibitor of apoptosis isoform beta 
NAIP                  0.113   NLR family, apoptosis inhibitory protein isoform 1 ...
BIRC7                 0.101   livin inhibitor of apoptosis isoform alpha 
NAIP                  0.051   NLR family, apoptosis inhibitory protein isoform 2 ...
BIRC6                 0.046   baculoviral IAP repeat-containing 6 
MYLIP                 0.035   myosin regulatory light chain interacting protein [H...
RNF34                 0.033   ring finger protein 34 isoform 1 
RNF34                 0.033   ring finger protein 34 isoform 2 
RFFL                  0.033   rififylin 
RFFL                  0.033   rififylin 
MEX3B                 0.027   mex-3 homolog B 
MIB1                  0.027   mindbomb homolog 1 
BIRC5                 0.026   baculoviral IAP repeat-containing protein 5 isoform ...
LRSAM1                0.023   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.023   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.023   leucine rich repeat and sterile alpha motif containi...
MEX3C                 0.020   ring finger and KH domain containing 2 
MIB2                  0.019   mindbomb homolog 2 
CGRRF1                0.018   cell growth regulator with ring finger domain 1 [Homo...
RNF26                 0.018   ring finger protein 26 
MEX3A                 0.017   MEX3A protein 
MUL1                  0.016   mitochondrial ubiquitin ligase activator of NFKB 1 ...
BIRC5                 0.015   baculoviral IAP repeat-containing protein 5 isoform ...
BIRC5                 0.015   baculoviral IAP repeat-containing protein 5 isoform ...
RNF157                0.014   ring finger protein 157 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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