Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 89363024
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89363024 hypothetical protein LOC161142 [Homo sapiens]
(422 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89363024 hypothetical protein LOC161142 [Homo sapiens] 832 0.0
gi|222418633 family with sequence similarity 71, member B [Homo ... 117 2e-26
gi|23503301 hypothetical protein LOC196472 [Homo sapiens] 113 3e-25
gi|23957696 hypothetical protein LOC149647 [Homo sapiens] 107 3e-23
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 93 5e-19
gi|76253859 hypothetical protein LOC112703 [Homo sapiens] 82 7e-16
gi|193083150 hypothetical protein LOC346653 isoform b [Homo sapi... 63 4e-10
gi|149192824 hypothetical protein LOC346653 isoform a [Homo sapi... 60 4e-09
gi|14211935 testes development-related NYD-SP18 [Homo sapiens] 59 6e-09
gi|83367077 mucin 16 [Homo sapiens] 42 0.001
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 39 0.012
gi|62244004 modulator of estrogen induced transcription isoform ... 36 0.058
gi|63176611 modulator of estrogen induced transcription isoform ... 36 0.058
gi|150170718 zinc finger protein 292 [Homo sapiens] 36 0.075
gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 34 0.29
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 34 0.29
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 33 0.37
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 33 0.49
gi|91982772 mucin 17 [Homo sapiens] 33 0.64
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 33 0.64
gi|67551265 transcription factor ELYS [Homo sapiens] 33 0.64
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 32 1.1
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 32 1.1
gi|239754269 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|169168665 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|113417486 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|239740898 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo ... 32 1.1
gi|239740777 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|239740724 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
>gi|89363024 hypothetical protein LOC161142 [Homo sapiens]
Length = 422
Score = 832 bits (2150), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 1 MKKNTSKTTMRINKQDALCTPHSHDPRDLQNMLDGGEYAPFVSPPMLESNFIQVNRRGES 60
MKKNTSKTTMRINKQDALCTPHSHDPRDLQNMLDGGEYAPFVSPPMLESNFIQVNRRGES
Sbjct: 1 MKKNTSKTTMRINKQDALCTPHSHDPRDLQNMLDGGEYAPFVSPPMLESNFIQVNRRGES 60
Query: 61 IYLHNRANWVTVGICFSSSTHKIPNVMLLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTR 120
IYLHNRANWVTVGICFSSSTHKIPNVMLLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTR
Sbjct: 61 IYLHNRANWVTVGICFSSSTHKIPNVMLLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTR 120
Query: 121 FLPLQFVTLSVHDAENMSLKVKLVSGRAYYLQLCTSAYKQDTLFSQWVALISLLNQEKAK 180
FLPLQFVTLSVHDAENMSLKVKLVSGRAYYLQLCTSAYKQDTLFSQWVALISLLNQEKAK
Sbjct: 121 FLPLQFVTLSVHDAENMSLKVKLVSGRAYYLQLCTSAYKQDTLFSQWVALISLLNQEKAK 180
Query: 181 VSKVSEVSSLSGITNSTDITGSMDVTDVTTFTAILTPYMYAGTGPEHVRDSIDFPEFTDI 240
VSKVSEVSSLSGITNSTDITGSMDVTDVTTFTAILTPYMYAGTGPEHVRDSIDFPEFTDI
Sbjct: 181 VSKVSEVSSLSGITNSTDITGSMDVTDVTTFTAILTPYMYAGTGPEHVRDSIDFPEFTDI 240
Query: 241 TDITDVTDLPENEVPEVPDVRIVTEVIEVREATEVTDSSDITNCSGVTVVFENNDLIRAK 300
TDITDVTDLPENEVPEVPDVRIVTEVIEVREATEVTDSSDITNCSGVTVVFENNDLIRAK
Sbjct: 241 TDITDVTDLPENEVPEVPDVRIVTEVIEVREATEVTDSSDITNCSGVTVVFENNDLIRAK 300
Query: 301 QEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEANT 360
QEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEANT
Sbjct: 301 QEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEANT 360
Query: 361 SKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTSVLSPHIKSPSNFLKLVPHLSAPFS 420
SKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTSVLSPHIKSPSNFLKLVPHLSAPFS
Sbjct: 361 SKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTSVLSPHIKSPSNFLKLVPHLSAPFS 420
Query: 421 RE 422
RE
Sbjct: 421 RE 422
>gi|222418633 family with sequence similarity 71, member B [Homo
sapiens]
Length = 605
Score = 117 bits (293), Expect = 2e-26
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 28 DLQNML-DGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPNV 86
DLQ L + GEY F PM ESNFIQ+N++GE I +HNR VTVGI +S +P+V
Sbjct: 27 DLQRQLYNRGEYNIFKYAPMFESNFIQINKKGEVIDVHNRVRMVTVGIVCTSPILPLPDV 86
Query: 87 MLLAHLTPGAQKDTET-LFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVS 145
M+LA T ++ F P + L LTR LPL+FV +S+HD E L++KL +
Sbjct: 87 MVLAQPTKICEQHVRWGRFAKGRGRRPVKTLELTRLLPLKFVKISIHDHEKQQLRLKLAT 146
Query: 146 GRAYYLQLCTSAYKQDTLFSQWVALISLL 174
GR +YLQLC S+ ++ LF W L+ LL
Sbjct: 147 GRTFYLQLCPSSDTREDLFCYWEKLVYLL 175
>gi|23503301 hypothetical protein LOC196472 [Homo sapiens]
Length = 241
Score = 113 bits (283), Expect = 3e-25
Identities = 66/148 (44%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 29 LQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPNVML 88
LQ L GEY F PM ES+FIQ+++RGE I +HNRA VT+GI +S +P+VML
Sbjct: 28 LQRQLYKGEYTIFRYAPMFESDFIQISKRGEVIDVHNRARMVTMGIVRTSPCLTLPDVML 87
Query: 89 LAHLTPGAQKDTETLFKSLLT--SPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVSG 146
LA P A D + SPPAE L LTR LPL FV +++H++ L +KL +G
Sbjct: 88 LAR--PAAVCDNARCGPATQKRESPPAEILELTRLLPLMFVKITIHNSVKKQLHLKLATG 145
Query: 147 RAYYLQLCTSAYKQDTLFSQWVALISLL 174
R++YLQLC + + LF W L+ +L
Sbjct: 146 RSFYLQLCPPSDASEDLFVHWENLVYIL 173
>gi|23957696 hypothetical protein LOC149647 [Homo sapiens]
Length = 594
Score = 107 bits (266), Expect = 3e-23
Identities = 63/147 (42%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 29 LQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPNVML 88
LQ L GEY F P+ ES+FIQ+ +RGE I +HNR VT+GI +S +P+VML
Sbjct: 28 LQRQLYKGEYDIFKYAPIFESDFIQITKRGEVIDVHNRVRMVTMGIARTSPILPLPDVML 87
Query: 89 LAHLTPGAQKDT-ETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVSGR 147
LA G ++ A+ L LTR LPL+FV +SV D E L++K +GR
Sbjct: 88 LARPATGCEEYAGHGQATKRKKRKAAKNLELTRLLPLRFVRISVQDHEKQQLRLKFATGR 147
Query: 148 AYYLQLCTSAYKQDTLFSQWVALISLL 174
+ YLQLC + +D LF+ W LI LL
Sbjct: 148 SCYLQLCPALDTRDDLFAYWEKLIYLL 174
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 92.8 bits (229), Expect = 5e-19
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
Query: 28 DLQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPNVM 87
+LQ L GEY P PM ESNF+QV +G +++++R N + +G+ S +P+++
Sbjct: 25 ELQKTLQKGEYLPLRPLPMFESNFVQVTHQGGPVFVNHRTNRLAMGVAASLPGLVLPDIL 84
Query: 88 LLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVSGR 147
L+ P +D LVLTR +PL V L VHD LK++LVSGR
Sbjct: 85 LIGQ--PAEDRD-------------CSGLVLTRMIPLDLVHLCVHDLSAWRLKLRLVSGR 129
Query: 148 AYYLQLCTSAYKQDTLFSQWVALISLLNQ 176
YYL L + LF WV LI+LL +
Sbjct: 130 QYYLALDAPDNEVGFLFHCWVRLINLLQE 158
>gi|76253859 hypothetical protein LOC112703 [Homo sapiens]
Length = 231
Score = 82.4 bits (202), Expect = 7e-16
Identities = 56/146 (38%), Positives = 73/146 (50%), Gaps = 23/146 (15%)
Query: 26 PRDLQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPN 85
PR LQ L GE+ F P+ ESNF+QV R GE AN VT+G+ SS ++P+
Sbjct: 93 PRRLQRYLQSGEFDQFRDFPIFESNFVQVTRLGEV------ANEVTMGVAASSPALELPD 146
Query: 86 VMLLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVS 145
++LLA G K+ L L PL+FV L VHD L+VKL +
Sbjct: 147 LLLLA----GPAKENG-------------HLQLFGLFPLKFVQLFVHDKSRCQLEVKLNT 189
Query: 146 GRAYYLQLCTSAYKQDTLFSQWVALI 171
R +YLQL +D F QWV L+
Sbjct: 190 SRTFYLQLRAPLKTRDREFGQWVRLL 215
>gi|193083150 hypothetical protein LOC346653 isoform b [Homo
sapiens]
Length = 300
Score = 63.2 bits (152), Expect = 4e-10
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 29 LQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPNVML 88
L ++ E+ F + + ESNFIQV + G + + V +G+ S + +PNV+L
Sbjct: 27 LCQLIHSPEFNLFSNSVVFESNFIQVTKPGNWRDVCEGSATVILGVTSSVPSLPLPNVLL 86
Query: 89 LAHLTPGAQKDTETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVSGRA 148
+A++T + F + T A + L+R LPL++V L ++D L+V+ V+ +
Sbjct: 87 MANVTW-----PQGPFTTWSTPGDAPVINLSRLLPLKYVELRIYDRLQRILRVRTVTEKI 141
Query: 149 YYLQLCTSAYKQDTLFSQWVALISLLNQEKAKVSKVSEVSSLSGI-----TNSTDIT 200
YYL+L + +F WV L+ +L + + +K + + TNST+ T
Sbjct: 142 YYLKL--HEKHPEIVFQFWVRLVKILQKGLSITTKDPRIKFTHCLVPKMPTNSTETT 196
>gi|149192824 hypothetical protein LOC346653 isoform a [Homo
sapiens]
Length = 309
Score = 60.1 bits (144), Expect = 4e-09
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 29 LQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANW---------VTVGICFSSS 79
L ++ E+ F + + ESNFIQ + + NW V +G+ S
Sbjct: 27 LCQLIHSPEFNLFSNSVVFESNFIQTHVPEADFQVTKPGNWRDVCEGSATVILGVTSSVP 86
Query: 80 THKIPNVMLLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSL 139
+ +PNV+L+A++T + F + T A + L+R LPL++V L ++D L
Sbjct: 87 SLPLPNVLLMANVTW-----PQGPFTTWSTPGDAPVINLSRLLPLKYVELRIYDRLQRIL 141
Query: 140 KVKLVSGRAYYLQLCTSAYKQDTLFSQWVALISLLNQEKAKVSKVSEVSSLSGI-----T 194
+V+ V+ + YYL+L + +F WV L+ +L + + +K + + T
Sbjct: 142 RVRTVTEKIYYLKL--HEKHPEIVFQFWVRLVKILQKGLSITTKDPRIKFTHCLVPKMPT 199
Query: 195 NSTDIT 200
NST+ T
Sbjct: 200 NSTETT 205
>gi|14211935 testes development-related NYD-SP18 [Homo sapiens]
Length = 344
Score = 59.3 bits (142), Expect = 6e-09
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 37 EYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPNVMLLAHLTPGA 96
E+ F+ + ESNFIQV R ++ +N + +G+ S +PN++L+A +
Sbjct: 67 EFNLFLDSVVFESNFIQVKRGRNWRDVYKASNTMALGVTSSVPCLPLPNILLMASV-KWH 125
Query: 97 QKDTETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVSGRAYYLQLCTS 156
Q +T + + A + L R LPL+FV L V D L+++ V+ + YYL+L
Sbjct: 126 QGQNQTWNRPSI----APNIFLKRILPLRFVELQVCDHYQRILQLRTVTEKIYYLKLHPD 181
Query: 157 AYKQDTLFSQWVALISLLNQ 176
+T+F W+ L+ +L +
Sbjct: 182 --HPETVFHFWIRLVQILQK 199
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 42.0 bits (97), Expect = 0.001
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 10/161 (6%)
Query: 241 TDITDVTDLPENEVPEVPDVRIVTEVIEVREATEVTDSSDITNCSGVTVVFENNDLIRAK 300
T + VT P++ + D+ + + E T + ++ +TN FE++ + A
Sbjct: 4792 TSLETVTSSPQSMSNTLDDISVTSAATTDIETTHPSINTVVTNVGTTGSAFESHSTVSAY 4851
Query: 301 QEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEANT 360
E + + ++DT + +SSK T ++LTP E +
Sbjct: 4852 PEPSKVTSPNVTTSTMEDTTISRSIPKSSKTTRTETET---------TSSLTPKLRETSI 4902
Query: 361 SKEMKDKTSEEKMPDFQSTALKAEESRS-LRTESNTSVLSP 400
S+E+ T +P + T E SR+ + + S+TS P
Sbjct: 4903 SQEITSSTETSTVPYKELTGATTEVSRTDVTSSSSTSFPGP 4943
Score = 35.0 bits (79), Expect = 0.13
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 32/213 (15%)
Query: 180 KVSKVSEVSSLSGITNSTDITGSMDVTDVTTFTAILTPYMYAGTGPEHVRDSIDFPEFTD 239
K S S + SLS +T+ + + TP + + P V S+ P
Sbjct: 8849 KTSPPSSLVSLSAVTSPSPLYS--------------TPSESSHSSPLRVT-SLFTPVMMK 8893
Query: 240 ITDITDVTDLPENEVPEVPDVRIVT-EVIEVREATEVTDSSDITNCSGVTVVFENNDLIR 298
TD+ D + P P P + I + E + +AT T++ ++ + VT + I
Sbjct: 8894 TTDMLDTSLEPVTTSP--PSMNITSDESLATSKATMETEAIQLSENTAVTQM----GTIS 8947
Query: 299 AKQEEKEKLKNILKPGCLQDTKSKSELKESS--KHVTISNITLTFEGKRYFQ---TTLTP 353
A+QE PG + +K S + SS K + + I + E R +TLTP
Sbjct: 8948 ARQEFYSSY-----PGLPEPSKVTSPVVTSSTIKDIVSTTIPASSEITRIEMESTSTLTP 9002
Query: 354 VESEANTSKEMKDKTSEEKMPDFQSTALKAEES 386
E +TS+E+ T +P T+ E+S
Sbjct: 9003 TPRETSTSQEIHSATKPSTVPYKALTSATIEDS 9035
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 38.5 bits (88), Expect = 0.012
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 297 IRAKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVES 356
++A+ + EK K+ +K K+KS +KE +K + + E K + +PV+
Sbjct: 670 VKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSP-EKAKSPVKE 728
Query: 357 EANTSKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTSVLSPHIKSPS 406
EA T ++ K EE A E+++S V SP K+P+
Sbjct: 729 EAKTPEKAKSPVKEE--------AKSPEKAKSPEKAKTLDVKSPEAKTPA 770
>gi|62244004 modulator of estrogen induced transcription isoform b
[Homo sapiens]
Length = 1016
Score = 36.2 bits (82), Expect = 0.058
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
V+EA + S I +T+ F+ +DL+ + K KP QD ++S KES
Sbjct: 217 VKEAEDDNISVTIQAEDAITLDFDGDDLLETGKNVKITDSEASKPKDGQDAIAQSPEKES 276
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEM-----KDKTSEEKMPDFQSTALKA 383
+ +N +GK+ PVE EA S + K+K + +K P + +A
Sbjct: 277 KDYEMNANHK---DGKKEDCVKGDPVEKEARESSKKAESGDKEKDTLKKGPSSTGASGQA 333
Query: 384 EESRSLRTESNTS 396
+ S +S TS
Sbjct: 334 KSSSKESKDSKTS 346
>gi|63176611 modulator of estrogen induced transcription isoform a
[Homo sapiens]
Length = 1034
Score = 36.2 bits (82), Expect = 0.058
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
V+EA + S I +T+ F+ +DL+ + K KP QD ++S KES
Sbjct: 235 VKEAEDDNISVTIQAEDAITLDFDGDDLLETGKNVKITDSEASKPKDGQDAIAQSPEKES 294
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEM-----KDKTSEEKMPDFQSTALKA 383
+ +N +GK+ PVE EA S + K+K + +K P + +A
Sbjct: 295 KDYEMNANHK---DGKKEDCVKGDPVEKEARESSKKAESGDKEKDTLKKGPSSTGASGQA 351
Query: 384 EESRSLRTESNTS 396
+ S +S TS
Sbjct: 352 KSSSKESKDSKTS 364
>gi|150170718 zinc finger protein 292 [Homo sapiens]
Length = 2723
Score = 35.8 bits (81), Expect = 0.075
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 278 SSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNI 337
+S +T+ S + ++ + L +A + L + K C K SE +E +K+ +
Sbjct: 2394 TSVVTSESNIIRHYKCHKLSKAFTSQHRNLLIVFKRCCNSQVKETSE-QEGAKNDVKDSD 2452
Query: 338 TLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTS 396
T E +TT T + E E +K +++ + T L E+S S+ T++NTS
Sbjct: 2453 TCVSESNDNSRTTATVSQKEV----EKNEKDEMDELTELFITKLINEDSTSVETQANTS 2507
>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
Length = 474
Score = 33.9 bits (76), Expect = 0.29
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 14/122 (11%)
Query: 297 IRAKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQ--TTLTPV 354
IR + E E+LK L+ LQ ++ ++ E +H+ N+ L + +R + L
Sbjct: 262 IRFLKNEVERLKKQLRAAQLQHSEKMAQYLEEERHMREENLRLQRKLQREMERREALCRQ 321
Query: 355 ESEANTSKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTSVLSPHIKSPSNFLKLVPH 414
SE+ +S EM D+ +M ++ LR + +S + P+ SPS+ + P
Sbjct: 322 LSESESSLEMDDERYFNEM-----------SAQGLRPRTVSSPI-PYTPSPSSSRPISPG 369
Query: 415 LS 416
LS
Sbjct: 370 LS 371
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 33.9 bits (76), Expect = 0.29
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 301 QEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTL 351
+E+ +KL+ ILKP L+ K E K + K TI + LT K+Y++ L
Sbjct: 1064 EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAIL 1114
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 33.5 bits (75), Expect = 0.37
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 301 QEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEANT 360
+E+ +KL++ILKP L+ K E + K TI + LT K+Y++ L E N
Sbjct: 665 EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAIL-----EKNF 719
Query: 361 SKEMKDKTSEEKMPDFQSTALK 382
S K ++ MP+ +T ++
Sbjct: 720 SFLTKG-ANQHNMPNLINTMME 740
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 33.1 bits (74), Expect = 0.49
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 293 NNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLT 352
N + + QEEK+K K ++ K E KE + T + E K T T
Sbjct: 630 NRNSLDGSQEEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTAT 689
Query: 353 PVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTSVL 398
P K K S K PD +++ALK + ++ S S L
Sbjct: 690 P--------KPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDL 727
Score = 32.3 bits (72), Expect = 0.83
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 285 SGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGK 344
S T + E DL +E+ +KL+ ILKP L+ K E + K TI + LT K
Sbjct: 1158 SETTFMQEFGDL--KTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQK 1215
Query: 345 RYFQTTL 351
+Y++ L
Sbjct: 1216 KYYRAIL 1222
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 32.7 bits (73), Expect = 0.64
Identities = 46/221 (20%), Positives = 81/221 (36%), Gaps = 17/221 (7%)
Query: 77 SSSTHKIPNVMLLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAEN 136
S+ST P V+ L TP T+ TS + LP+ T + +
Sbjct: 3613 SNSTPTPPEVITLPMSTPSEVSTPLTIMPVSTTSVTISEAGTASTLPVDTSTPVITSTQV 3672
Query: 137 MSLKVKLVSGRAYYLQLCTSAYKQDTLFSQWVALISLLNQEKAKVSKVSEVSSLSGITNS 196
S V + + + T + L + V+ + + E + +S S V+S + +T S
Sbjct: 3673 SSSPV---TPEGTTMPIWTPSEGSTPLTTMPVSTTRVTSSEGSTLSTPSVVTS-TPVTTS 3728
Query: 197 TDITGSMDVTDVTTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPE 256
T+ S D TT + + P + G T + T VT PE+ P
Sbjct: 3729 TEAISSSATLDSTTMSVSM-PMEISTLGT------------TILVSTTPVTRFPESSTPS 3775
Query: 257 VPDVRIVTEVIEVREATEVTDSSDITNCSGVTVVFENNDLI 297
+P V + E + + + T ++ E + L+
Sbjct: 3776 IPSVYTSMSMTTASEGSSSPTTLEGTTTMPMSTTSERSTLL 3816
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 32.7 bits (73), Expect = 0.64
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 299 AKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEA 358
AK+EEK++ + + K ++KE +K + ++T E+E
Sbjct: 1034 AKEEEKKE----------EMEEEKKQVKEEAKEQCGDELVAEPADPEEAKSTEDQEENEE 1083
Query: 359 NTSKEMKDKTSEEKMPDFQSTALKAEESRSLR-TESNTSVLSPH 401
+ +E K++ SEE+ D S+ EE+ LR +ES S +P+
Sbjct: 1084 DKEEEEKEEDSEEEEDDADSSLESPEENNPLRLSESKKSSPTPN 1127
>gi|67551265 transcription factor ELYS [Homo sapiens]
Length = 2266
Score = 32.7 bits (73), Expect = 0.64
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 299 AKQEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEA 358
AK E + K L L + S + S K +T T + KR + SE
Sbjct: 2015 AKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKK--TESQSQKRSLHSV-----SEE 2067
Query: 359 NTSKEMKDKTSEEKMPDFQSTALKAEESRSLRTESNTSVLSPHIKSPSN 407
T EM K + E+ +TA + SRS RT S+ ++L P + P+N
Sbjct: 2068 RTD-EMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNN 2115
Score = 28.9 bits (63), Expect = 9.2
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 255 PEVPDVRIVTEVIEVREATEVTDS--SDITNCSGVTVVFENNDLIRAKQEEKEKLKNILK 312
P++P + + + +E +E +++ SD+ S + +N+ R + +KE ++IL+
Sbjct: 1765 PKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILE 1824
Query: 313 PGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEK 372
+ + EL+ IT E KR + L E T KE+K + ++
Sbjct: 1825 ----NTSSVEQELQ----------ITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKR 1870
Query: 373 MPDFQSTALKAEESRSLRTESNTSVLSPHIKSPSNFLK 410
P +++ +ES + + S + SPS ++
Sbjct: 1871 TPRRIKRSVENQESVEIINDLKVST----VTSPSRMIR 1904
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 32.0 bits (71), Expect = 1.1
Identities = 51/204 (25%), Positives = 76/204 (37%), Gaps = 21/204 (10%)
Query: 226 EHVRDSIDFPEFTDITDIT-DVTDLPENEVPEVPDVRIVTEVIEVREATEVTDSSDITNC 284
EHV SI PE D +++ D D + P E + TD +
Sbjct: 195 EHVSKSIGIPEVQDFKNLSGDCQDFRFQQHSANPPHEFQPVESEAVATSGNTDVMQESRF 254
Query: 285 SGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKS-----ELKESSKHVTIS-NIT 338
S T L AK EK + C + S EL + HV I+ ++
Sbjct: 255 SSATWPRATKSL--AKGGFSEKQHPLGDTACTVEMPPLSPCLSEELLDPELHVLITPSLR 312
Query: 339 LTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRSL------RTE 392
E + F+ E E E + + EEK+ D + T L A+E SL R +
Sbjct: 313 EKTESELKFE------EDERWIMMEAEGEWEEEKLSDREKTFLMADEKNSLADIFEEREQ 366
Query: 393 SNTSVLSPHIKSPSNFLKLVPHLS 416
+NT+V+ + L+ HLS
Sbjct: 367 ANTAVVEDGSDCLAAVLRTFGHLS 390
>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
sapiens]
Length = 2302
Score = 32.0 bits (71), Expect = 1.1
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 301 QEEKEKLKNILKPGCLQDTKSKSELKESSKHVTISNITLTFEGKRYFQTTL 351
+E+ +KL+ ILKP L+ K E + K TI + LT K+Y++ L
Sbjct: 736 EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAIL 786
>gi|239754269 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 32.0 bits (71), Expect = 1.1
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 152 QLCTSAYKQDTLFSQ--WVALISLLNQEKAKVSKV-SEVSSLSGITNSTDITGSMDVTDV 208
++ T++ K T+F++ + S E VS SE S + T T S + ++
Sbjct: 794 KVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSET 853
Query: 209 TTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPEVPDVRIVTEVIE 268
TT + G E S + E T T I T E E TE E
Sbjct: 854 TTAST---------EGSETTTASTESSETTTATTIGSETTTASTEGSETTTTS--TEGSE 902
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
A+ T+ S+IT TV ++ A E E T + +E E
Sbjct: 903 TTTAS--TEGSEIT-----TVSTTGSETTTASTEGSET------------TTASTEGSEL 943
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRS 388
+ T + T+T + TT+T + SE T+ +T+ ++T E S +
Sbjct: 944 TTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSET 1003
Query: 389 LRTESNTS 396
S S
Sbjct: 1004 TTVSSTGS 1011
>gi|169168665 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1521
Score = 32.0 bits (71), Expect = 1.1
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 152 QLCTSAYKQDTLFSQ--WVALISLLNQEKAKVSKV-SEVSSLSGITNSTDITGSMDVTDV 208
++ T++ K T+F++ + S E VS SE S + T T S + ++
Sbjct: 794 KVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSET 853
Query: 209 TTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPEVPDVRIVTEVIE 268
TT + G E S + E T T I T E E TE E
Sbjct: 854 TTAST---------EGSETTTASTESSETTTATTIGSETTTASTEGSETTTTS--TEGSE 902
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
A+ T+ S+IT TV ++ A E E T + +E E
Sbjct: 903 TTTAS--TEGSEIT-----TVSTTGSETTTASTEGSET------------TTASTEGSEL 943
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRS 388
+ T + T+T + TT+T + SE T+ +T+ ++T E S +
Sbjct: 944 TTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSET 1003
Query: 389 LRTESNTS 396
S S
Sbjct: 1004 TTVSSTGS 1011
>gi|113417486 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 32.0 bits (71), Expect = 1.1
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 152 QLCTSAYKQDTLFSQ--WVALISLLNQEKAKVSKV-SEVSSLSGITNSTDITGSMDVTDV 208
++ T++ K T+F++ + S E VS SE S + T T S + ++
Sbjct: 794 KVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSET 853
Query: 209 TTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPEVPDVRIVTEVIE 268
TT + G E S + E T T I T E E TE E
Sbjct: 854 TTAST---------EGSETTTASTESSETTTATTIGSETTTASTEGSETTTTS--TEGSE 902
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
A+ T+ S+IT TV ++ A E E T + +E E
Sbjct: 903 TTTAS--TEGSEIT-----TVSTTGSETTTASTEGSET------------TTASTEGSEL 943
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRS 388
+ T + T+T + TT+T + SE T+ +T+ ++T E S +
Sbjct: 944 TTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSET 1003
Query: 389 LRTESNTS 396
S S
Sbjct: 1004 TTVSSTGS 1011
>gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1542
Score = 32.0 bits (71), Expect = 1.1
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 152 QLCTSAYKQDTLFSQ--WVALISLLNQEKAKVSKV-SEVSSLSGITNSTDITGSMDVTDV 208
++ T++ K T+F++ + S E VS SE S + T T S + ++
Sbjct: 815 KVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSET 874
Query: 209 TTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPEVPDVRIVTEVIE 268
TT + G E S + E T T I T E E TE E
Sbjct: 875 TTAST---------EGSETTTASTESSETTTATTIGSETTTASTEGSETTTTS--TEGSE 923
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
A+ T+ S+IT TV ++ A E E T + +E E
Sbjct: 924 TTTAS--TEGSEIT-----TVSTTGSETTTASTEGSET------------TTASTEGSEL 964
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRS 388
+ T + T+T + TT+T + SE T+ +T+ ++T E S +
Sbjct: 965 TTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSET 1024
Query: 389 LRTESNTS 396
S S
Sbjct: 1025 TTVSSTGS 1032
>gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo
sapiens]
Length = 1521
Score = 32.0 bits (71), Expect = 1.1
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 152 QLCTSAYKQDTLFSQ--WVALISLLNQEKAKVSKV-SEVSSLSGITNSTDITGSMDVTDV 208
++ T++ K T+F++ + S E VS SE S + T T S + ++
Sbjct: 794 KVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSET 853
Query: 209 TTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPEVPDVRIVTEVIE 268
TT + G E S + E T T I T E E TE E
Sbjct: 854 TTAST---------EGSETTTASTESSETTTATTIGSETTTASTEGSETTTTS--TEGSE 902
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
A+ T+ S+IT TV ++ A E E T + +E E
Sbjct: 903 TTTAS--TEGSEIT-----TVSTTGSETTTASTEGSET------------TTASTEGSEL 943
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRS 388
+ T + T+T + TT+T + SE T+ +T+ ++T E S +
Sbjct: 944 TTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSET 1003
Query: 389 LRTESNTS 396
S S
Sbjct: 1004 TTVSSTGS 1011
>gi|239740777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 32.0 bits (71), Expect = 1.1
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 152 QLCTSAYKQDTLFSQ--WVALISLLNQEKAKVSKV-SEVSSLSGITNSTDITGSMDVTDV 208
++ T++ K T+F++ + S E VS SE S + T T S + ++
Sbjct: 794 KVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSET 853
Query: 209 TTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPEVPDVRIVTEVIE 268
TT + G E S + E T T I T E E TE E
Sbjct: 854 TTAST---------EGSETTTASTESSETTTATTIGSETTTASTEGSETTTTS--TEGSE 902
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
A+ T+ S+IT TV ++ A E E T + +E E
Sbjct: 903 TTTAS--TEGSEIT-----TVSTTGSETTTASTEGSET------------TTASTEGSEL 943
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRS 388
+ T + T+T + TT+T + SE T+ +T+ ++T E S +
Sbjct: 944 TTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSET 1003
Query: 389 LRTESNTS 396
S S
Sbjct: 1004 TTVSSTGS 1011
>gi|239740724 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1704
Score = 32.0 bits (71), Expect = 1.1
Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 33/248 (13%)
Query: 152 QLCTSAYKQDTLFSQ--WVALISLLNQEKAKVSKV-SEVSSLSGITNSTDITGSMDVTDV 208
++ T++ K T+F++ + S E VS SE S + T T S + ++
Sbjct: 794 KVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSET 853
Query: 209 TTFTAILTPYMYAGTGPEHVRDSIDFPEFTDITDITDVTDLPENEVPEVPDVRIVTEVIE 268
TT + G E S + E T T I T E E TE E
Sbjct: 854 TTAST---------EGSETTTASTESSETTTATTIGSETTTASTEGSETTTTS--TEGSE 902
Query: 269 VREATEVTDSSDITNCSGVTVVFENNDLIRAKQEEKEKLKNILKPGCLQDTKSKSELKES 328
A+ T+ S+IT TV ++ A E E T + +E E
Sbjct: 903 TTTAS--TEGSEIT-----TVSTTGSETTTASTEGSET------------TTASTEGSEL 943
Query: 329 SKHVTISNITLTFEGKRYFQTTLTPVESEANTSKEMKDKTSEEKMPDFQSTALKAEESRS 388
+ T + T+T + TT+T + SE T+ +T+ ++T E S +
Sbjct: 944 TTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSET 1003
Query: 389 LRTESNTS 396
S S
Sbjct: 1004 TTVSSTGS 1011
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,734,974
Number of Sequences: 37866
Number of extensions: 590930
Number of successful extensions: 1921
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1827
Number of HSP's gapped (non-prelim): 128
length of query: 422
length of database: 18,247,518
effective HSP length: 105
effective length of query: 317
effective length of database: 14,271,588
effective search space: 4524093396
effective search space used: 4524093396
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.