FAM71A 16473

Name: FAM71A	Sequence: fasta or formatted (594aa)		NCBI GI: 23957696
Description: hypothetical protein LOC149647		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 72 4 C cysteine 1.2 7 1 D aspartate 4.4 26 2 E glutamate 5.7 34 2 F phenylalanine 2.2 13 1 G glycine 9.3 55 2 H histidine 2.5 15 1 I isoleucine 3.4 20 1 K lysine 5.7 34 2 L leucine 6.7 40 2 M methionine 3.5 21 2 N asparagine 3.0 18 1 P proline 3.9 23 2 Q glutamine 3.5 21 2 R arginine 7.4 44 3 S serine 10.9 65 3 T threonine 6.7 40 2 V valine 5.6 33 2 W tryptophan 0.5 3 1 Y tyrosine 1.7 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC149647 FAM71B 0.420 family with sequence similarity 71, member B FAM71C 0.207 hypothetical protein LOC196472 FAM71D 0.072 hypothetical protein LOC161142 FAM71E1 0.071 hypothetical protein LOC112703 FAM71E2 0.059 hypothetical protein LOC284418 FAM71F1 0.053 testes development-related NYD-SP18 FAM71F2 0.042 hypothetical protein LOC346653 isoform b FAM71F2 0.035 hypothetical protein LOC346653 isoform a MUC21 0.026 mucin 21 SON 0.025 SON DNA-binding protein isoform F SON 0.025 SON DNA-binding protein isoform B ARL6IP4 0.024 SRp25 nuclear protein isoform 3 LOC100292370 0.022 PREDICTED: hypothetical protein ZRANB2 0.021 zinc finger protein 265 isoform 1 CDC2L5 0.020 cell division cycle 2-like 5 isoform 1 CDC2L5 0.020 cell division cycle 2-like 5 isoform 2 ARL6IP4 0.019 SRp25 nuclear protein isoform 4 ARL6IP4 0.019 SRp25 nuclear protein isoform 2 HOXA13 0.019 homeobox A13 SFRS16 0.018 splicing factor, arginine/serine-rich 16 HRNR 0.018 hornerin RSRC2 0.018 arginine/serine-rich coiled-coil 2 isoform a FLG 0.018 filaggrin SFRS11 0.016 splicing factor, arginine/serine-rich 11 PNN 0.016 pinin, desmosome associated protein CIR1 0.015 CBF1 interacting corepressor SFRS2 0.015 splicing factor, arginine/serine-rich 2 LOC729792 0.015 PREDICTED: hypothetical protein LOC100294136 0.015 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.