FAM71F1 3895

Name: FAM71F1	Sequence: fasta or formatted (344aa)		NCBI GI: 14211935
Description: testes development-related NYD-SP18		Referenced in: Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.8 13 2 C cysteine 2.0 7 1 D aspartate 3.2 11 1 E glutamate 5.2 18 2 F phenylalanine 4.1 14 1 G glycine 4.9 17 1 H histidine 2.6 9 1 I isoleucine 4.7 16 1 K lysine 6.1 21 2 L leucine 11.9 41 2 M methionine 1.2 4 1 N asparagine 4.7 16 1 P proline 7.3 25 2 Q glutamine 5.5 19 2 R arginine 6.1 21 1 S serine 10.8 37 2 T threonine 5.5 19 2 V valine 6.4 22 2 W tryptophan 2.3 8 1 Y tyrosine 1.7 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 testes development-related NYD-SP18 FAM71F2 0.369 hypothetical protein LOC346653 isoform b FAM71F2 0.358 hypothetical protein LOC346653 isoform a FAM71A 0.088 hypothetical protein LOC149647 FAM71B 0.087 family with sequence similarity 71, member B FAM71C 0.069 hypothetical protein LOC196472 FAM71E1 0.059 hypothetical protein LOC112703 FAM71E2 0.058 hypothetical protein LOC284418 FAM71D 0.050 hypothetical protein LOC161142 AMOTL1 0.013 angiomotin like 1 GPC3 0.012 glypican 3 VPS13B 0.012 vacuolar protein sorting 13B isoform 5 VPS13B 0.012 vacuolar protein sorting 13B isoform 1 VPS13B 0.012 vacuolar protein sorting 13B isoform 4 VPS13B 0.012 vacuolar protein sorting 13B isoform 3 LOC100287979 0.007 PREDICTED: hypothetical protein XP_002344243 CDK5RAP2 0.007 CDK5 regulatory subunit associated protein 2 isoform... CDK5RAP2 0.007 CDK5 regulatory subunit associated protein 2 isoform... LOC100292113 0.007 PREDICTED: hypothetical protein XP_002345530 LOC100290048 0.007 PREDICTED: hypothetical protein XP_002348148 LOC100288945 0.007 PREDICTED: hypothetical protein XP_002343821 NUP155 0.006 nucleoporin 155kDa isoform 2 NUP155 0.006 nucleoporin 155kDa isoform 1 NFAT5 0.006 nuclear factor of activated T-cells 5 isoform a [Hom... NFAT5 0.006 nuclear factor of activated T-cells 5 isoform c [Homo... NFAT5 0.006 nuclear factor of activated T-cells 5 isoform d [Ho... NFAT5 0.006 nuclear factor of activated T-cells 5 isoform b [Ho... NFAT5 0.006 nuclear factor of activated T-cells 5 isoform a [Hom... COMMD9 0.006 COMM domain containing 9 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.