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Search of human proteins with 89353295
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89353295 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1a [Homo sapiens]
(575 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89353295 core-binding factor, runt domain, alpha subunit 2; t... 1179 0.0
gi|74229008 core-binding factor, runt domain, alpha subunit 2; t... 1179 0.0
gi|4826663 core-binding factor, runt domain, alpha subunit 2; tr... 1179 0.0
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 755 0.0
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 755 0.0
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 755 0.0
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 755 0.0
gi|28872805 myeloid translocation gene on chromosome 16 isoform ... 689 0.0
gi|28872803 myeloid translocation gene on chromosome 16 isoform ... 675 0.0
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 68 2e-11
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 68 2e-11
gi|110832843 TBP-associated factor 4 [Homo sapiens] 49 1e-05
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (... 48 2e-05
gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo sa... 44 4e-04
gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens] 43 7e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 42 0.002
gi|31652264 RNA binding motif protein 26 [Homo sapiens] 42 0.002
gi|148612857 sickle tail isoform 3 [Homo sapiens] 41 0.003
gi|148612813 sickle tail isoform 2 [Homo sapiens] 41 0.003
gi|50843820 sickle tail isoform 1 [Homo sapiens] 41 0.003
gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] 41 0.003
gi|38505161 tudor domain containing 1 [Homo sapiens] 40 0.004
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 40 0.004
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 40 0.004
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 40 0.004
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.013
gi|13489073 egl nine homolog 1 [Homo sapiens] 38 0.022
gi|19923391 homeobox D3 [Homo sapiens] 37 0.038
gi|12232401 SET and MYND domain containing 3 [Homo sapiens] 37 0.038
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 37 0.038
>gi|89353295 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1a [Homo sapiens]
Length = 575
Score = 1179 bits (3050), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR
Sbjct: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
Query: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV
Sbjct: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
Query: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH
Sbjct: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
Query: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH
Sbjct: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
Query: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG
Sbjct: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
Query: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR
Sbjct: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
Query: 361 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 420
YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK
Sbjct: 361 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 420
Query: 421 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 480
IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN
Sbjct: 421 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 480
Query: 481 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 540
CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR
Sbjct: 481 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 540
Query: 541 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 575
SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL
Sbjct: 541 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 575
>gi|74229008 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1c [Homo sapiens]
Length = 595
Score = 1179 bits (3050), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR
Sbjct: 21 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 80
Query: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV
Sbjct: 81 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 140
Query: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH
Sbjct: 141 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 200
Query: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH
Sbjct: 201 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 260
Query: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG
Sbjct: 261 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 320
Query: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR
Sbjct: 321 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 380
Query: 361 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 420
YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK
Sbjct: 381 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 440
Query: 421 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 480
IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN
Sbjct: 441 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 500
Query: 481 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 540
CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR
Sbjct: 501 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 560
Query: 541 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 575
SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL
Sbjct: 561 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 595
>gi|4826663 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1b [Homo sapiens]
Length = 604
Score = 1179 bits (3050), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR
Sbjct: 30 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 89
Query: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV
Sbjct: 90 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 149
Query: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH
Sbjct: 150 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 209
Query: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH
Sbjct: 210 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 269
Query: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG
Sbjct: 270 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 329
Query: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR
Sbjct: 330 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 389
Query: 361 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 420
YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK
Sbjct: 390 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 449
Query: 421 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 480
IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN
Sbjct: 450 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 509
Query: 481 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 540
CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR
Sbjct: 510 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 569
Query: 541 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 575
SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL
Sbjct: 570 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 604
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 59
Query: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 60 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 119
Query: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 120 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 179
Query: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 180 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 239
Query: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 240 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 298
Query: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 299 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 358
Query: 361 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 418
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 359 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 418
Query: 419 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 478
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 419 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 478
Query: 479 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 538
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 479 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 531
Query: 539 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 572
+ + + SP +D A T RS+TP + + I+T
Sbjct: 532 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 564
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 59
Query: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 60 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 119
Query: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 120 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 179
Query: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 180 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 239
Query: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 240 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 298
Query: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 299 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 358
Query: 361 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 418
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 359 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 418
Query: 419 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 478
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 419 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 478
Query: 479 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 538
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 479 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 531
Query: 539 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 572
+ + + SP +D A T RS+TP + + I+T
Sbjct: 532 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 564
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 38 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 96
Query: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 97 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 156
Query: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 157 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 216
Query: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 217 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 276
Query: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 277 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 335
Query: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 336 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 395
Query: 361 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 418
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 396 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 455
Query: 419 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 478
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 456 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 515
Query: 479 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 538
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 516 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 568
Query: 539 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 572
+ + + SP +D A T RS+TP + + I+T
Sbjct: 569 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 601
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 11 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 69
Query: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 70 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 129
Query: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 130 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 189
Query: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 190 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 249
Query: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 250 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 308
Query: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 309 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 368
Query: 361 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 418
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 369 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 428
Query: 419 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 478
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 429 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 488
Query: 479 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 538
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 489 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 541
Query: 539 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 572
+ + + SP +D A T RS+TP + + I+T
Sbjct: 542 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 574
>gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
Length = 567
Score = 689 bits (1777), Expect = 0.0
Identities = 353/587 (60%), Positives = 433/587 (73%), Gaps = 38/587 (6%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPI-NPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQ 59
MP SP EVK Q RS+PP+MPP PP + G RP SFTP L NG +HSP +NGAP P
Sbjct: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
Query: 60 RFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLAL 119
FSNGPA+S++++L+ Q LP CGARQLSKLKRFLTTLQQFG+DISPEIGE+VRTLVL L
Sbjct: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
Query: 120 VNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHE 179
VNST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQTP+QYLAQHE
Sbjct: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
Query: 180 HLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPR 239
LLL+ S +SP DSSELL+EV+ NGKR +P+R +EN DRD + PE +KR CT++PA R
Sbjct: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
Query: 240 HSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNG 299
+SP+ G PTPPP HY LEDIA +H +R+ + + RE+R+RH L + G
Sbjct: 241 YSPS--------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPG 290
Query: 300 GYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKR 359
Q+E++DH+LTEREWA+EWKHL++ LNCIM+MVEKTRRS+ VLRRCQE+DREELN+W R
Sbjct: 291 SRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWAR 350
Query: 360 RYNENTELRKTGTELVSRQHSPGSA-DSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 418
RY++ + +K +R S + + D REF R TGYVP + W+K EEAVN+
Sbjct: 351 RYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
Query: 419 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 478
VK QAMSE+QKAV++AE+KA E+I TERA+ME+ +A+ KRQA+EDA VIN+QE+S+E+C
Sbjct: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
Query: 479 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG-------------QSPHG 525
WNCGRKASETCSGCN ARYCGSFCQH+DWE+HH +CGQ+L G ++ H
Sbjct: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
Query: 526 QGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 572
G P LPVG S PS A SA SR +P+ +DT
Sbjct: 531 LG-PSLPVGAAS---------PSEA---GSAGPSRPGSPSPPGPLDT 564
>gi|28872803 myeloid translocation gene on chromosome 16 isoform
MTG16a [Homo sapiens]
Length = 653
Score = 675 bits (1741), Expect = 0.0
Identities = 353/612 (57%), Positives = 433/612 (70%), Gaps = 63/612 (10%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPPI-NPGGPRPVSFTPTA-------------------- 39
MP SP EVK Q RS+PP+MPP PP + G RP SFTP
Sbjct: 62 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTHREDGPATLPHGRFHGCLKW 121
Query: 40 -----LSNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFL 94
L NG +HSP +NGAP P FSNGPA+S++++L+ Q LP CGARQLSKLKRFL
Sbjct: 122 SMVCLLMNGSSHSPTAINGAPCTPNGFSNGPATSSTASLSTQHLPPACGARQLSKLKRFL 181
Query: 95 TTLQQFGNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLP 154
TTLQQFG+DISPEIGE+VRTLVL LVNST+TIEEFH KLQEATNFPLRPFVIPFLKANLP
Sbjct: 182 TTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLP 241
Query: 155 LLQRELLHCARAAKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPERREE 214
LLQRELLHCAR AKQTP+QYLAQHE LLL+ S +SP DSSELL+EV+ NGKR +P+R +E
Sbjct: 242 LLQRELLHCARLAKQTPAQYLAQHEQLLLDASASSPIDSSELLLEVNENGKRRTPDRTKE 301
Query: 215 NSFDRDTIAPEPPAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSH 274
N DRD + PE +KR CT++PA R+SP+ G PTPPP HY LEDIA +H
Sbjct: 302 NGSDRDPLHPEHLSKRPCTLNPAQRYSPS--------NGPPQPTPPP--HYRLEDIAMAH 351
Query: 275 LYREPNKMLEHREVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVE 334
+R+ + + RE+R+RH L + G Q+E++DH+LTEREWA+EWKHL++ LNCIM+MVE
Sbjct: 352 HFRDAYRHPDPRELRERHRPLVVPGSRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVE 411
Query: 335 KTRRSMAVLRRCQESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSA-DSLSNDSQR 393
KTRRS+ VLRRCQE+DREELN+W RRY++ + +K +R S + + D R
Sbjct: 412 KTRRSLTVLRRCQEADREELNHWARRYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPR 471
Query: 394 EFNSRPGTGYVPVEFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTI 453
EF R TGYVP + W+K EEAVN+VK QAMSE+QKAV++AE+KA E+I TERA+ME+ +
Sbjct: 472 EFLPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERAL 531
Query: 454 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 513
A+ KRQA+EDA VIN+QE+S+E+CWNCGRKASETCSGCN ARYCGSFCQH+DWE+HH +
Sbjct: 532 AEAKRQASEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHV 591
Query: 514 CGQNLHG-------------QSPHGQGRPLLPVGRGSSARSADCSVPSPALDKTSATTSR 560
CGQ+L G ++ H G P LPVG S PS A SA SR
Sbjct: 592 CGQSLQGPTAVVADPVPGPPEAAHSLG-PSLPVGAAS---------PSEA---GSAGPSR 638
Query: 561 SSTPASVTAIDT 572
+P+ +DT
Sbjct: 639 PGSPSPPGPLDT 650
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 454 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 513
A R+AA + + + E ++C NCGR+A C+GC+ YC +FCQ KDW+ H +
Sbjct: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
Query: 514 CGQN 517
CGQ+
Sbjct: 540 CGQS 543
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 454 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 513
A R+AA + + + E ++C NCGR+A C+GC+ YC +FCQ KDW+ H +
Sbjct: 341 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 400
Query: 514 CGQN 517
CGQ+
Sbjct: 401 CGQS 404
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 48.9 bits (115), Expect = 1e-05
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 58 PQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGND--ISPEIGEKVRTL 115
PQR G A++TSSA T + K K FL+TL + + S E V+ L
Sbjct: 572 PQRTVPG-ATTTSSAATETM-------ENVKKCKNFLSTLIKLASSGKQSTETAANVKEL 623
Query: 116 VLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQ 173
V L++ + E+F +L N +P+++PFLK +LP L++ A +Q+ Q
Sbjct: 624 VQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQ 681
>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 105kDa [Homo sapiens]
Length = 862
Score = 48.1 bits (113), Expect = 2e-05
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 33 VSFTPTALSNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKR 92
V+ TP N + P+ GA S P N A ++++ N L T + K K
Sbjct: 208 VTVTPGKPLNTVTTLKPSSLGASSTPSNEPNLKAENSAAVQIN--LSPTM-LENVKKCKN 264
Query: 93 FLTTLQQFG--NDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLK 150
FL L + SPE+G+ V+ LV L+++ + EEF KL +P ++PFLK
Sbjct: 265 FLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEEFTRKLYVELKSSPQPHLVPFLK 324
Query: 151 ANLPLLQREL 160
++ L++ L
Sbjct: 325 KSVVALRQLL 334
>gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo
sapiens]
Length = 441
Score = 43.9 bits (102), Expect = 4e-04
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 428 QKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEES------TENCWNC 481
+K + E+ +K AT ++ ++IA V+ + AF V+ + E C C
Sbjct: 264 EKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTC 323
Query: 482 GRK-ASETCSGCNIARYCGSFCQHKDWERHHRLC 514
G K AS+ CS C + YC CQ W H ++C
Sbjct: 324 GEKGASKRCSVCKMVIYCDQTCQKTHWFTHKKIC 357
>gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens]
Length = 227
Score = 43.1 bits (100), Expect = 7e-04
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 489 CSGCNIARYCGSFCQHKDWERHHRLC 514
C C +ARYCGS CQ KDW H + C
Sbjct: 187 CGRCQVARYCGSQCQQKDWPAHKKHC 212
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 12 SRSSPPTMPPLPPINPGGPRPVSFTPTALSNGIN----HSPPTLNGAPSPPQRFSNGPAS 67
S +PP PP PP+ P P+P S P + N ++ PPT P PP P
Sbjct: 1954 SPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPP 2013
Query: 68 STSSALTNQQLPAT 81
SA QLP +
Sbjct: 2014 PPPSAPPQVQLPVS 2027
Score = 30.0 bits (66), Expect = 6.0
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 1 MPGSPVEVKIQSRSSPPTMPPLPP----INPGGPRPVSFTPTALSN---GINHSP--PTL 51
+PG P V + + P ++P P + P G + F +A S+ ++ +P P L
Sbjct: 3056 LPGLP-PVLLPGMNGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSSPALSLSSAPTKPLL 3114
Query: 52 NGAPSPPQRFSNGPASSTSSALTNQQ 77
P PP P+SS S T QQ
Sbjct: 3115 QTPPPPPPPPPPPPSSSLSGQQTEQQ 3140
>gi|31652264 RNA binding motif protein 26 [Homo sapiens]
Length = 980
Score = 41.6 bits (96), Expect = 0.002
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 2 PGSPVEVKIQSRSSPPTMPPLPPINPGGP-----RPVSFTPTALSNGINHSPPTLNGAPS 56
P P+ + + PP PPLPP+ P G S PT ++ GI+H PP P+
Sbjct: 366 PPGPLPPSLPPVTGPP--PPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPP-----PA 418
Query: 57 PPQRFS 62
PP F+
Sbjct: 419 PPSLFT 424
Score = 32.7 bits (73), Expect = 0.93
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 5 PVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNG-INHSPPTLNGAPSP-----P 58
P + + PP +PP PPI P PV+ P G + S P + G P P P
Sbjct: 332 PAQPPVVEGPPPPGLPPPPPILT--PPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQP 389
Query: 59 QRFSNGPASSTSSALT 74
P S+TSS T
Sbjct: 390 SGMDAPPNSATSSVPT 405
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 41.2 bits (95), Expect = 0.003
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 15 SPPTMPP------LPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQRFSNGPASS 68
SP T PP +P ++ G + S T T + ++ SP + NG PP FS+ P S
Sbjct: 1207 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1266
Query: 69 TSSALTNQQLPAT 81
SS NQ T
Sbjct: 1267 ASSVSLNQGAKGT 1279
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 41.2 bits (95), Expect = 0.003
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 15 SPPTMPP------LPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQRFSNGPASS 68
SP T PP +P ++ G + S T T + ++ SP + NG PP FS+ P S
Sbjct: 1162 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1221
Query: 69 TSSALTNQQLPAT 81
SS NQ T
Sbjct: 1222 ASSVSLNQGAKGT 1234
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 41.2 bits (95), Expect = 0.003
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 15 SPPTMPP------LPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQRFSNGPASS 68
SP T PP +P ++ G + S T T + ++ SP + NG PP FS+ P S
Sbjct: 1841 SPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSP 1900
Query: 69 TSSALTNQQLPAT 81
SS NQ T
Sbjct: 1901 ASSVSLNQGAKGT 1913
>gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens]
Length = 440
Score = 40.8 bits (94), Expect = 0.003
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 411 KTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERAR-----MEQTIADVKRQAAEDAF 465
+T+ + ++ + E+ + + + ++ IA + + EQ + R+ AE
Sbjct: 321 ETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHVFSPSEQDLRLQARRWAETYR 380
Query: 466 L-VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 514
L V+ C C +AS+ CS C YC CQ K WE+H + C
Sbjct: 381 LDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 40.4 bits (93), Expect = 0.004
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 478 CWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 514
C CG S CS C YC + CQ +DW H +C
Sbjct: 170 CHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVC 206
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 40.4 bits (93), Expect = 0.004
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 428 QKAVAEAEQKAFEVIATERARMEQT----IADVKRQAAEDAFLVINEQEESTENCWNCGR 483
Q+ ++E + +A R +EQ IA+VK+Q + ++E ++ + C NC +
Sbjct: 924 QQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKK-QWCANCKK 982
Query: 484 KASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPV------GRGS 537
+A C C YC CQ W H + C Q+ G S
Sbjct: 983 EAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSS 1040
Query: 538 SARSADCSVPSPALDK-TSATTSRSS 562
S +SA S + +K TSA S+ S
Sbjct: 1041 STQSAPSETASASKEKETSAEKSKES 1066
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 40.4 bits (93), Expect = 0.004
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 428 QKAVAEAEQKAFEVIATERARMEQT----IADVKRQAAEDAFLVINEQEESTENCWNCGR 483
Q+ ++E + +A R +EQ IA+VK+Q + ++E ++ + C NC +
Sbjct: 949 QQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKK-QWCANCKK 1007
Query: 484 KASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPV------GRGS 537
+A C C YC CQ W H + C Q+ G S
Sbjct: 1008 EAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSS 1065
Query: 538 SARSADCSVPSPALDK-TSATTSRSS 562
S +SA S + +K TSA S+ S
Sbjct: 1066 STQSAPSETASASKEKETSAEKSKES 1091
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 40.4 bits (93), Expect = 0.004
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 428 QKAVAEAEQKAFEVIATERARMEQT----IADVKRQAAEDAFLVINEQEESTENCWNCGR 483
Q+ ++E + +A R +EQ IA+VK+Q + ++E ++ + C NC +
Sbjct: 949 QQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKK-QWCANCKK 1007
Query: 484 KASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPV------GRGS 537
+A C C YC CQ W H + C Q+ G S
Sbjct: 1008 EAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSS 1065
Query: 538 SARSADCSVPSPALDK-TSATTSRSS 562
S +SA S + +K TSA S+ S
Sbjct: 1066 STQSAPSETASASKEKETSAEKSKES 1091
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 38.9 bits (89), Expect = 0.013
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 12 SRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQRFSNGPASSTSS 71
S ++PP + PLPP++ P P P + GI PP L AP PP +SS SS
Sbjct: 611 SSTAPPPVMPLPPLSSATP-PPGIPPPGVPQGI---PPQLTAAPVPP------ASSSQSS 660
Query: 72 ALTNQQLPA 80
+ + PA
Sbjct: 661 QVPEKPRPA 669
Score = 31.2 bits (69), Expect = 2.7
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 17/89 (19%)
Query: 2 PGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNG---INHSPPTLNGAPSP- 57
PG P + S PP +PP P ++ GP PV P+ S + PP + P P
Sbjct: 576 PGMPPS--LSSAGPPPVLPP-PSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPG 632
Query: 58 ----------PQRFSNGPASSTSSALTNQ 76
P + + P SS+ ++Q
Sbjct: 633 IPPPGVPQGIPPQLTAAPVPPASSSQSSQ 661
Score = 30.4 bits (67), Expect = 4.6
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query: 15 SPPTMPPLPP----------INPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQRFSNG 64
SPP PP+PP + P P P + PT+ + + P + + SPP +
Sbjct: 145 SPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQP--SPSQSPPSQSYLA 202
Query: 65 PASSTSSALTNQQ 77
P S SS+ ++ Q
Sbjct: 203 PTPSYSSSSSSSQ 215
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 38.1 bits (87), Expect = 0.022
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 472 EESTENCWNCGRKASET-CSGCNIARYCGSFCQHKDWERHHRLC----GQNLHGQSPHGQ 526
E + C CG+ + CS C + YC Q +DW++H +C G HG PH
Sbjct: 15 ERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVCQGSEGALGHGVGPHQH 74
Query: 527 GRPLLP 532
P P
Sbjct: 75 SGPAPP 80
>gi|19923391 homeobox D3 [Homo sapiens]
Length = 432
Score = 37.4 bits (85), Expect = 0.038
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 21/108 (19%)
Query: 10 IQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQRFSNGP-ASS 68
+ S PP PP PP P S PT G P ++ GP ASS
Sbjct: 110 LNSEQQPPQPPPPPPTLP------------------PSSPTNPGGGVPAKKPKGGPNASS 151
Query: 69 TSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISP--EIGEKVRT 114
+S+ ++ Q P +RQ SK K T + D SP ++VRT
Sbjct: 152 SSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRT 199
>gi|12232401 SET and MYND domain containing 3 [Homo sapiens]
Length = 369
Score = 37.4 bits (85), Expect = 0.038
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 489 CSGCNIARYCGSFCQHKDWERHHRLC 514
CS C +A+YC + CQ K W H R C
Sbjct: 3 CSQCRVAKYCSAKCQKKAWPDHKREC 28
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 37.4 bits (85), Expect = 0.038
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 11 QSRSSPPTM-PPLP--------PINPGGPRPVSFTPT---ALSNGINHSPPTLNG----- 53
+S S PP + PPLP P+ P P PV+ TP+ ALS +PP ++
Sbjct: 819 RSSSDPPAVHPPLPPLRVTSTNPLTPTPPPPVAKTPSVMEALSQPSKPAPPGISQIRPPP 878
Query: 54 -APSPPQRFSN---GPASSTSSALTNQQLP 79
P PP R P + S+ LTN+ P
Sbjct: 879 LPPQPPSRLPQKKPAPGADKSTPLTNKGQP 908
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,188,654
Number of Sequences: 37866
Number of extensions: 1488675
Number of successful extensions: 8586
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 7359
Number of HSP's gapped (non-prelim): 1327
length of query: 575
length of database: 18,247,518
effective HSP length: 108
effective length of query: 467
effective length of database: 14,157,990
effective search space: 6611781330
effective search space used: 6611781330
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.