Guide to the Human Genome
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Name: ZMYND19 Sequence: fasta or formatted (227aa) NCBI GI: 19923997
Description:

zinc finger, MYND domain containing 19

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         13           1
 C cysteine            3.5          8           1
 D aspartate           4.8         11           1
 E glutamate           9.7         22           4
 F phenylalanine       3.5          8           1
 G glycine             6.6         15           2
 H histidine           3.1          7           1
 I isoleucine          3.5          8           1
 K lysine              5.3         12           2
 L leucine             7.9         18           2
 M methionine          0.9          2           1
 N asparagine          4.4         10           1
 P proline             5.3         12           2
 Q glutamine           6.2         14           2
 R arginine            8.4         19           1
 S serine              3.5          8           2
 T threonine           4.0          9           1
 V valine              7.0         16           2
 W tryptophan          2.2          5           1
 Y tyrosine            4.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, MYND domain containing 19 
SMYD3                 0.046   SET and MYND domain containing 3 
SMYD2                 0.046   SET and MYND domain containing 2 
ZMYND17               0.046   zinc finger, MYND domain containing 17 
CBFA2T2               0.039   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.039   core-binding factor, runt domain, alpha subunit 2; t...
CBFA2T2               0.039   core-binding factor, runt domain, alpha subunit 2; tr...
RUNX1T1               0.035   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.035   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.035   acute myelogenous leukemia 1 translocation 1 protein...
RUNX1T1               0.035   acute myelogenous leukemia 1 translocation 1 protein ...
SMYD1                 0.033   SET and MYND domain containing 1 
CBFA2T3               0.033   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T3               0.033   myeloid translocation gene on chromosome 16 isoform ...
TDRD1                 0.031   tudor domain containing 1 
EGLN1                 0.024   egl nine homolog 1 
USP19                 0.022   ubiquitin thioesterase 19 
ZMYND10               0.022   zinc finger, MYND domain-containing 10 
ANKMY2                0.022   ankyrin repeat and MYND domain containing 2 
ZMYND8                0.020   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.020   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.020   zinc finger, MYND-type containing 8 isoform b 
DEAF1                 0.017   deformed epidermal autoregulatory factor 1 
LOC100294411          0.017   PREDICTED: similar to deformed epidermal autoregula...
LOC389813             0.015   similar to CG15216-PA 
ZMYND11               0.013   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND11               0.013   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND12               0.011   zinc finger, MYND-type containing 12 isoform 1 [Hom...
PDCD2                 0.011   programmed cell death 2 isoform 2 
PDCD2                 0.011   programmed cell death 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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