Search of human proteins with 89257348

Search of human proteins with 89257348

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|89257348 homeo box HB9 [Homo sapiens]
         (401 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|89257348 homeo box HB9 [Homo sapiens]                              818   0.0  
gi|148613882 homeobox A4 [Homo sapiens]                               113   3e-25
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]               110   3e-24
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                 107   1e-23
gi|194363768 homeobox D9 [Homo sapiens]                               105   6e-23
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...   102   8e-22
gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]            101   1e-21
gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]          100   2e-21
gi|13375632 homeobox D1 [Homo sapiens]                                100   2e-21
gi|24497526 homeobox B1 [Homo sapiens]                                100   2e-21
gi|94536800 empty spiracles homolog 1 [Homo sapiens]                   98   1e-20
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  96   4e-20
gi|33457326 GS homeobox 1 [Homo sapiens]                               96   6e-20
gi|18959212 GS homeobox 2 [Homo sapiens]                               95   1e-19
gi|226437602 NK1 homeobox 2 [Homo sapiens]                             93   4e-19
gi|19923391 homeobox D3 [Homo sapiens]                                 93   4e-19
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  93   4e-19
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  93   4e-19
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  93   4e-19
gi|24497538 homeobox C4 [Homo sapiens]                                 93   5e-19
gi|24497540 homeobox C4 [Homo sapiens]                                 93   5e-19
gi|24497517 homeobox A5 [Homo sapiens]                                 92   1e-18
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]                   91   2e-18
gi|85068580 homeobox B7 [Homo sapiens]                                 91   2e-18
gi|7710121 engrailed homeobox 2 [Homo sapiens]                         91   2e-18
gi|15029506 homeobox D8 [Homo sapiens]                                 90   3e-18
gi|147901462 brain specific homeobox [Homo sapiens]                    90   4e-18
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       89   7e-18
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       89   7e-18
gi|23397672 homeobox D4 [Homo sapiens]                                 89   9e-18

>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score =  818 bits (2112), Expect = 0.0
 Identities = 401/401 (100%), Positives = 401/401 (100%)

Query: 1   MEKSKNFRIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSP 60
           MEKSKNFRIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSP
Sbjct: 1   MEKSKNFRIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSP 60

Query: 61  ASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPG 120
           ASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPG
Sbjct: 61  ASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPG 120

Query: 121 AAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHP 180
           AAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHP
Sbjct: 121 AAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHP 180

Query: 181 ALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGK 240
           ALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGK
Sbjct: 181 ALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGK 240

Query: 241 CRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSK 300
           CRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSK
Sbjct: 241 CRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSK 300

Query: 301 KAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDKGSGRRLRDLRDSDPEEDE 360
           KAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDKGSGRRLRDLRDSDPEEDE
Sbjct: 301 KAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDKGSGRRLRDLRDSDPEEDE 360

Query: 361 DEDDEDHFPYSNGASVHAASSDCSSEDDSPPPRPSHQPAPQ 401
           DEDDEDHFPYSNGASVHAASSDCSSEDDSPPPRPSHQPAPQ
Sbjct: 361 DEDDEDHFPYSNGASVHAASSDCSSEDDSPPPRPSHQPAPQ 401


>gi|148613882 homeobox A4 [Homo sapiens]
          Length = 320

 Score =  113 bits (282), Expect = 3e-25
 Identities = 95/302 (31%), Positives = 127/302 (42%), Gaps = 46/302 (15%)

Query: 46  GGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGG 105
           G GGA GG  G   P   +PPA P   L  + P  P                 AGGG   
Sbjct: 28  GSGGADGGPGGG--PGYQQPPAPPTQHLPLQQPQLPH----------------AGGGREP 69

Query: 106 TGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGL---------PAQA 156
           T        ++A   A   A  AAA   A G A   +P G +GGA           PAQA
Sbjct: 70  TAS------YYAPRTAREPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQA 123

Query: 157 ALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRA 216
               H ++             Q  A+  + P+   A PA P  P     G+      L A
Sbjct: 124 KGPAHGLHASHVLQPQLPPPLQPRAVPPAAPRRCEAAPATPGVP---AGGSAPACPLLLA 180

Query: 217 STAGM--------ILPKMPDFNSQAQSNLL--GKCRRPRTAFTSQQLLELEHQFKLNKYL 266
             + +        + P M   +  A +     G+ +R RTA+T QQ+LELE +F  N+YL
Sbjct: 181 DKSPLGLKGKEPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYL 240

Query: 267 SRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAE 326
           +R +R E+A +L L+E QVKIWFQNRRMKWK+  K      + +       G  GK   +
Sbjct: 241 TRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGPPGKAQTQ 300

Query: 327 EP 328
            P
Sbjct: 301 SP 302


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score =  110 bits (274), Expect = 3e-24
 Identities = 108/315 (34%), Positives = 126/315 (40%), Gaps = 67/315 (21%)

Query: 57  SCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGG------------- 103
           +C+P +S P  APA    A S  PPR        L   G +GA G               
Sbjct: 73  ACAPCASAP-CAPAP---AASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEA 128

Query: 104 -----GGTGGGHGGPHHHAHPG--------------AAAAAAAAAAAAAAGGLALGLHPG 144
                 G   G GG    A  G                  AA  A  A  GG  LG    
Sbjct: 129 ETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGS 188

Query: 145 GAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLG 204
           G QG A   A          G +   AAA      P    + P  QG  P   A P   G
Sbjct: 189 GCQGAAETDASP--------GATVDEAAA------PGPRENSPVAQGP-PGGAAAPG--G 231

Query: 205 AGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNK 264
           AGT          TA    PK     S ++S   GK RR RTAFT +QL+ LE++FK  +
Sbjct: 232 AGTTP------QGTATAAKPKRKRTGSDSKS---GKPRRARTAFTYEQLVALENKFKATR 282

Query: 265 YLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGG 324
           YLS  +R  +A SL LTETQVKIWFQNRR KWK     K+    +     GGGGG G G 
Sbjct: 283 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-----KQNPGADTSAPTGGGGGPGPGA 337

Query: 325 AEEPGAEELLGPPAP 339
               G    L P +P
Sbjct: 338 GPGTGLPGGLSPLSP 352



 Score = 34.3 bits (77), Expect = 0.21
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 307 AQEAEKQK-GGGGGAGKGGAEEPGAEELL--GPPAPGD-----KGSGRRLRDLRDSDPEE 358
           A+E E++   G GG G  GAE P A +    G     D      G G         D   
Sbjct: 95  AEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVP 154

Query: 359 DEDEDDEDHFPYSNGA 374
           D+++DDED  P +  A
Sbjct: 155 DDEDDDEDEAPETEAA 170



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 35  AAAASGTGGGGGGGGASG---GTSGSCSPASSEPP 66
           A  ++ TGGGGG G  +G   G  G  SP S  PP
Sbjct: 321 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPP 355



 Score = 30.0 bits (66), Expect = 3.9
 Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 37  AASGTGGGGGGGGASGGTSGSCSPA--SSEPPAAPADRLRAESPSPPRLLAAHCALLPKP 94
           AA G     GGGG  G     C  A  +   P A  D   A  P     +A        P
Sbjct: 169 AARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAQ-----GPP 223

Query: 95  GFLGAGGGGGGTGGG 109
           G   A GG G T  G
Sbjct: 224 GGAAAPGGAGTTPQG 238


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score =  107 bits (268), Expect = 1e-23
 Identities = 107/315 (33%), Positives = 125/315 (39%), Gaps = 67/315 (21%)

Query: 57  SCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGG------------- 103
           +C+P +S P  APA    A S  PPR        L   G +GA G               
Sbjct: 476 ACAPCASAP-CAPAP---AASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEA 531

Query: 104 -----GGTGGGHGGPHHHAHPG--------------AAAAAAAAAAAAAAGGLALGLHPG 144
                 G   G GG    A  G                  AA  A  A  GG  LG    
Sbjct: 532 ETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGS 591

Query: 145 GAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLG 204
           G QG A   A          G +   AAA      P    + P   G  P   A P   G
Sbjct: 592 GCQGAAETDASP--------GATVDEAAA------PGPRENSPVAPGP-PGGAAAPG--G 634

Query: 205 AGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNK 264
           AGT          TA    PK     S ++S   GK RR RTAFT +QL+ LE++FK  +
Sbjct: 635 AGTTP------QGTATAAKPKRKRTGSDSKS---GKPRRARTAFTYEQLVALENKFKATR 685

Query: 265 YLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGG 324
           YLS  +R  +A SL LTETQVKIWFQNRR KWK     K+    +     GGGGG G G 
Sbjct: 686 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-----KQNPGADTSAPTGGGGGPGPGA 740

Query: 325 AEEPGAEELLGPPAP 339
               G    L P +P
Sbjct: 741 GPGTGLPGGLSPLSP 755



 Score = 34.3 bits (77), Expect = 0.21
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 307 AQEAEKQK-GGGGGAGKGGAEEPGAEELL--GPPAPGD-----KGSGRRLRDLRDSDPEE 358
           A+E E++   G GG G  GAE P A +    G     D      G G         D   
Sbjct: 498 AEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVP 557

Query: 359 DEDEDDEDHFPYSNGA 374
           D+++DDED  P +  A
Sbjct: 558 DDEDDDEDEAPETEAA 573



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%)

Query: 35  AAAASGTGGGGG---GGGASGGTSGSCSPASSEPP 66
           A  ++ TGGGGG   G G   G  G  SP S  PP
Sbjct: 724 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPP 758



 Score = 30.0 bits (66), Expect = 3.9
 Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 37  AASGTGGGGGGGGASGGTSGSCSPA--SSEPPAAPADRLRAESPSPPRLLAAHCALLPKP 94
           AA G     GGGG  G     C  A  +   P A  D   A  P     +A        P
Sbjct: 572 AARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAP-----GPP 626

Query: 95  GFLGAGGGGGGTGGG 109
           G   A GG G T  G
Sbjct: 627 GGAAAPGGAGTTPQG 641


>gi|194363768 homeobox D9 [Homo sapiens]
          Length = 352

 Score =  105 bits (263), Expect = 6e-23
 Identities = 100/314 (31%), Positives = 130/314 (41%), Gaps = 34/314 (10%)

Query: 18  PRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAES 77
           P    AQ  P  +    AA A+           S   S S S   S+PPAA A       
Sbjct: 40  PPGPGAQGRPAGVADGPAATAAEFASCSFAP-RSAVFSASWSAVPSQPPAAAAMSGLYHP 98

Query: 78  PSPPRLLAAHCA---------LLPKPGFLG-AGGGGGGTGGGHG------------GPHH 115
             PP  LAA  +         + P PGF G AGGGGGG GGG G            G H+
Sbjct: 99  YVPPPPLAASASEPGRYVRSWMEPLPGFPGGAGGGGGGGGGGPGRGPSPGPSGPANGRHY 158

Query: 116 HAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSA---AAAA 172
              P   AA A A AA+     +  L     +    +  ++     P +  ++     AA
Sbjct: 159 GIKPETRAAPAPATAASTTSSSSTSLSSSSKRTECSVARESQGSSGPEFSCNSFLQEKAA 218

Query: 173 AALAGQHPALSYSYPQVQG--AHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFN 230
           AA  G  P          G  + P+  +D    G    + ++         + P  P  N
Sbjct: 219 AATGGTGPGAGIGAATGTGGSSEPSACSDHPIPGCSLKEEEKQHSQPQQQQLDPNNPAAN 278

Query: 231 -SQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWF 289
              A+S      R+ R  +T  Q LELE +F  N YL+R +R+EVA  L LTE QVKIWF
Sbjct: 279 WIHARST-----RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWF 333

Query: 290 QNRRMKWKRSKKAK 303
           QNRRMK K+  K K
Sbjct: 334 QNRRMKMKKMSKEK 347



 Score = 34.3 bits (77), Expect = 0.21
 Identities = 21/73 (28%), Positives = 36/73 (49%)

Query: 4   SKNFRIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASS 63
           S + R +  +A +   ++  + +  + +   AAAA+G  G G G GA+ GT GS  P++ 
Sbjct: 186 SSSKRTECSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPGAGIGAATGTGGSSEPSAC 245

Query: 64  EPPAAPADRLRAE 76
                P   L+ E
Sbjct: 246 SDHPIPGCSLKEE 258


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score =  102 bits (253), Expect = 8e-22
 Identities = 104/356 (29%), Positives = 149/356 (41%), Gaps = 49/356 (13%)

Query: 8   RIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPA 67
           R  A L   PP AA    A +      AA      G      +S  +S    P  +  P 
Sbjct: 11  RQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPG 70

Query: 68  A---PADRLRAESPSPPRLLAAHCA-----LLPKPGFLGAGGGGGGTGGGHGGPHHHAHP 119
               PA    +   SPP+ L+A        +L +P  +    G         G    +  
Sbjct: 71  GLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPS-MPVASGAALPSASPSGSSSSSSS 129

Query: 120 GAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHP----VYGYSAAAAAAAL 175
            A+A++A+AAAAAAA   A    P G    AGLP  ++L   P    +Y +S +AAA A 
Sbjct: 130 SASASSASAAAAAAAAAAAAASSPAGLL--AGLPRFSSLSPPPPPPGLY-FSPSAAAVAA 186

Query: 176 AGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQS 235
            G++P      P   G  P           G  Q   W  A  A           +  Q 
Sbjct: 187 VGRYPKPLAELP---GRTPI-------FWPGVMQSPPWRDARLAC----------TPHQG 226

Query: 236 NLL----GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQN 291
           ++L    GK +  R  F+ QQ+  LE  F+  KYL+ P+R  +A SL +TE+QVK+WFQN
Sbjct: 227 SILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQN 286

Query: 292 RRMKWKRS-----KKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPAPGDK 342
           RR KW++        AK++   E E+ K    GA +   E+    + L P +  +K
Sbjct: 287 RRTKWRKKHAAEMATAKKKQDSETERLK----GASENEEEDDDYNKPLDPNSDDEK 338


>gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]
          Length = 363

 Score =  101 bits (251), Expect = 1e-21
 Identities = 104/327 (31%), Positives = 123/327 (37%), Gaps = 71/327 (21%)

Query: 35  AAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPS--PPRLLAAHCALLP 92
           A   S  GG GGGGG   GT+ S       PP      L    P   P R L    AL P
Sbjct: 4   AGGGSAPGGNGGGGGGGPGTAFSIDSLIGPPPPRSGHLLYTGYPMFMPYRPLVLPQALAP 63

Query: 93  KP------------GFLGAGGGGGGTGGGHGGPHHHA----------------HPGAAAA 124
            P             F G        G G   P   A                 P   AA
Sbjct: 64  APLPAGLPPLAPLASFAGRLTNTFCAGLGQAVPSMVALTTALPSFAEPPDAFYGPQELAA 123

Query: 125 AAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSY 184
           AAAAAAA AA        PGG +   GL A   L             A       P  S 
Sbjct: 124 AAAAAAATAARN---NPEPGGRRPEGGLEADELLPARE-------KVAEPPPPPPPHFSE 173

Query: 185 SYPQVQGAHPAHPADPIKLGA----------------GTFQLDQWLRASTAG--MILPKM 226
           ++P +      + +D  KL A                G  + D +L +S  G   +L   
Sbjct: 174 TFPSLPAEGKVYSSDEEKLEASAGDPAGSEQEEEGSGGDSEDDGFLDSSAGGPGALLGPK 233

Query: 227 PDFNSQAQSNLL-------------GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFE 273
           P       +                GK RR RTAFTS+QLLELE +F   KYLS  +R +
Sbjct: 234 PKLKGSLGTGAEEGAPVTAGVTAPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQ 293

Query: 274 VATSLMLTETQVKIWFQNRRMKWKRSK 300
           +A +L L+E QVKIWFQNRR KWKR K
Sbjct: 294 IAHALKLSEVQVKIWFQNRRAKWKRIK 320


>gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]
          Length = 283

 Score =  100 bits (250), Expect = 2e-21
 Identities = 55/109 (50%), Positives = 66/109 (60%), Gaps = 20/109 (18%)

Query: 242 RRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKK 301
           +R RTA+T  QLLELE +F  NKY+SRP+R E+A  L LTE  +KIWFQNRRMKWK+   
Sbjct: 147 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK--- 203

Query: 302 AKEQAAQEAEKQKGGGGGAGKGGAEEP-------GAEELLG---PPAPG 340
                  E +K++GGG   G GG  EP         EELL    PP PG
Sbjct: 204 -------EEDKKRGGGTAVGGGGVAEPEQDCAVTSGEELLALPPPPPPG 245


>gi|13375632 homeobox D1 [Homo sapiens]
          Length = 328

 Score =  100 bits (249), Expect = 2e-21
 Identities = 88/288 (30%), Positives = 127/288 (44%), Gaps = 27/288 (9%)

Query: 18  PRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAES 77
           P+   + + P+AL  +         G G G   S     +  P+ S PPAAPA   R   
Sbjct: 25  PKFCRSDARPVALQPAFPL------GNGDGAFVSCLPLAAARPSPS-PPAAPA---RPSV 74

Query: 78  PSPPRLLAAHCAL--LPKPGFLGAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAG 135
           P P     A C L    +PG   A   GG   G  G    +  PG    AA    +    
Sbjct: 75  PPPAAPQYAQCTLEGAYEPGAAPAAAAGGADYGFLGSGPAYDFPGVLGRAADDGGSHVHY 134

Query: 136 GLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHP- 194
             +     GG+   +G    AA +G P  G   A   A+  G HP    +     G +P 
Sbjct: 135 ATSAVFSGGGSFLLSGQVDYAA-FGEP--GPFPACLKASADG-HPGAFQTASPAPGTYPK 190

Query: 195 -AHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQL 253
              PA  +     TF+   W++         K+ ++ + + S+ +      RT F+++QL
Sbjct: 191 SVSPASGLPAAFSTFE---WMKVKRNASKKGKLAEYGAASPSSAI------RTNFSTKQL 241

Query: 254 LELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKK 301
            ELE +F  NKYL+R +R E+A  L L +TQVKIWFQNRRMK K+ ++
Sbjct: 242 TELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKRER 289


>gi|24497526 homeobox B1 [Homo sapiens]
          Length = 301

 Score =  100 bits (249), Expect = 2e-21
 Identities = 93/286 (32%), Positives = 121/286 (42%), Gaps = 43/286 (15%)

Query: 18  PRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAES 77
           P A SA SAP +   S A A       G  GG  G +S +    S  P   P   L    
Sbjct: 19  PSAYSAHSAPTSFPPSSAQAVDSYASEGRYGG--GLSSPAFQQNSGYPAQQPPSTLGVPF 76

Query: 78  PS--PPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAG 135
           PS  P     A C+    P      G   G GG       + HP        ++  A  G
Sbjct: 77  PSSAPSGYAPAACSPSYGPSQYYPLGQSEGDGG-------YFHP--------SSYGAQLG 121

Query: 136 GLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPA 195
           GL+ G   GGA  G   P       HP YG    A+ A         +Y+    +     
Sbjct: 122 GLSDGYGAGGAGPGPYPPQ------HPPYGNEQTASFAP--------AYADLLSEDKETP 167

Query: 196 HPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLE 255
            P++P    A TF    W++         + P   ++     LG     RT FT++QL E
Sbjct: 168 CPSEPNTPTARTFD---WMKVK-------RNPPKTAKVSEPGLGSPSGLRTNFTTRQLTE 217

Query: 256 LEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKK 301
           LE +F  NKYLSR +R E+A +L L ETQVKIWFQNRRMK K+ ++
Sbjct: 218 LEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 263


>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
          Length = 290

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 92/273 (33%), Positives = 121/273 (44%), Gaps = 28/273 (10%)

Query: 58  CSPASSEPP---AAPADRLRAESPSPPRLL--AAHCALLPKPGFLGAGGGGGGTGGGHGG 112
           C+P  +  P   A P  RL   +P+   +   AA      +      GG GGGTGGG  G
Sbjct: 6   CTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAG 65

Query: 113 PHHHAHPGAAAAAAAAAAAAAAGGLALGL-HPGGAQGG--AGLPAQAAL-YGHPVYGYSA 168
            H           AAAA+       AL   HP  A+    +G PA AA   G  +YG   
Sbjct: 66  SH---------LLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPE 116

Query: 169 AAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGA---GTFQLDQW-LRASTAG--MI 222
                A+   HPAL+       GA P  P      GA          W LR    G    
Sbjct: 117 LVFPEAM--NHPALTVHPAHQLGASPLQPPHSF-FGAQHRDPLHFYPWVLRNRFFGHRFQ 173

Query: 223 LPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTE 282
              +P            K +R RTAF+  QLL LE  F+ N Y+   +R ++A SL L+E
Sbjct: 174 ASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSE 233

Query: 283 TQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKG 315
           TQVK+WFQNRR K+KR +K +E+  +  +K+KG
Sbjct: 234 TQVKVWFQNRRTKYKR-QKLEEEGPESEQKKKG 265


>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 653

 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 8/122 (6%)

Query: 218 TAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATS 277
           TA    PK     S ++S   GK RR RTAFT +QL+ LE++FK  +YLS  +R  +A S
Sbjct: 77  TATAAKPKRKRTGSDSKS---GKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALS 133

Query: 278 LMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPP 337
           L LTETQVKIWFQNRR KWK     K+    +     GGGGG G G     G    L P 
Sbjct: 134 LSLTETQVKIWFQNRRTKWK-----KQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPL 188

Query: 338 AP 339
           +P
Sbjct: 189 SP 190



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 35  AAAASGTGGGGGGGGASG---GTSGSCSPASSEPP 66
           A  ++ TGGGGG G  +G   G  G  SP S  PP
Sbjct: 159 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPP 193


>gi|33457326 GS homeobox 1 [Homo sapiens]
          Length = 264

 Score = 95.9 bits (237), Expect = 6e-20
 Identities = 85/225 (37%), Positives = 104/225 (46%), Gaps = 36/225 (16%)

Query: 113 PH--HHAHPGAAAAAAAAAAAAAAGGL-ALGLHPGGAQGGAGLPAQAALYGHPVYGYSAA 169
           PH  H   PGA  A  A         + A  LH  G  G   LP   A +  P +G  + 
Sbjct: 36  PHALHGLSPGACHARKAGLLCVCPLCVTASQLH--GPPGPPALPLLKASF--PPFG--SQ 89

Query: 170 AAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDF 229
              A L  QH A+S   P V     AH        A  +Q             LP    F
Sbjct: 90  YCHAPLGRQHSAVS---PGV-----AHGPAAAAAAAALYQ---------TSYPLPDPRQF 132

Query: 230 NS---QAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVK 286
           +     + SN L   +R RTAFTS QLLELE +F  N YLSR +R E+AT L L+E QVK
Sbjct: 133 HCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVK 192

Query: 287 IWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAE 331
           IWFQNRR+K K+  K        +  + GGGGGAG GG+   G +
Sbjct: 193 IWFQNRRVKHKKEGKG-------SNHRGGGGGGAGGGGSAPQGCK 230


>gi|18959212 GS homeobox 2 [Homo sapiens]
          Length = 304

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 97/295 (32%), Positives = 121/295 (41%), Gaps = 85/295 (28%)

Query: 17  PPRAASAQSAPLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAE 76
           P R + A       VTS   ++ G+ G G GG  +G T    S  +    A P   L+++
Sbjct: 51  PSRKSGAFCVCPLCVTSHLHSSRGSVGAGSGGAGAGVTGAGGSGVAGAAGALPL--LKSQ 108

Query: 77  SPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAH------PGAAAAAAAAAA 130
             S P          P+                H  P HH H      PG+AAAAAAAAA
Sbjct: 109 FSSAP----GDAQFCPRVNH---------AHHHHHPPQHHHHHHQPQQPGSAAAAAAAAA 155

Query: 131 AAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQ 190
           AAAA                     AA  GHP               QH A       V 
Sbjct: 156 AAAA---------------------AAALGHP---------------QHHA------PVC 173

Query: 191 GAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTS 250
            A   + ADP +    T            G    ++P+          GK  R RTAFTS
Sbjct: 174 TATTYNVADPRRFHCLTM----------GGSDASQVPN----------GK--RMRTAFTS 211

Query: 251 QQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQ 305
            QLLELE +F  N YLSR +R E+AT L L+E QVKIWFQNRR+K K+  K  ++
Sbjct: 212 TQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGTQR 266


>gi|226437602 NK1 homeobox 2 [Homo sapiens]
          Length = 310

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 13/106 (12%)

Query: 240 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 299
           K RR RTAFT +QL+ LE++F+  +YLS  +R  +A SL LTETQVKIWFQNRR KWK+ 
Sbjct: 162 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 221

Query: 300 KKAKEQAAQ-----EAEKQKGGGGGAGKGGAEEPGAEELLGPPAPG 340
               + AAQ           GGGGG G GG+         GPP  G
Sbjct: 222 NPGADGAAQVGGGAPQPGAAGGGGGGGSGGSP--------GPPGTG 259



 Score = 33.5 bits (75), Expect = 0.35
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%)

Query: 92  PKPGFLGAGGGGGGTGGGHGGP------HHHAHPGAAAAAAAAAAAAA 133
           P+PG   AGGGGGG  GG  GP      H    P  +AA     +AA+
Sbjct: 236 PQPG--AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAAS 281



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%)

Query: 38  ASGTGGGGGGGGASG--GTSG-------SCSPASSEPPAAPADRLRAESPSPP 81
           A+G GGGGG GG+ G  GT         S S A+   P+A +  L A +P  P
Sbjct: 240 AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSP 292



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 118 HPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAG 177
           +PGA  AA     A   G  A G   GG+ G  G P   AL+      YSAA      A 
Sbjct: 222 NPGADGAAQVGGGAPQPGA-AGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 280

Query: 178 QHP 180
             P
Sbjct: 281 SFP 283


>gi|19923391 homeobox D3 [Homo sapiens]
          Length = 432

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 89/288 (30%), Positives = 127/288 (44%), Gaps = 49/288 (17%)

Query: 44  GGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGG 103
           GG G   +  T G  +P    PP A A  L  + P     + +  A L  P   GA   G
Sbjct: 30  GGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSS-APLRAPAHKGAELNG 88

Query: 104 G----GTGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGL--ALGLHPGGAQGGAGLPAQAA 157
                GTG   GG      PG  +             L  +   +PGG     G+PA+  
Sbjct: 89  SCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGG-----GVPAKK- 142

Query: 158 LYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRAS 217
               P  G +A++++A ++ Q       +P ++ +                   Q    +
Sbjct: 143 ----PKGGPNASSSSATISKQ------IFPWMKESRQ--------------NSKQKNSCA 178

Query: 218 TAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATS 277
           TAG         + + +S      +R RTA+TS QL+ELE +F  N+YL RP+R E+A  
Sbjct: 179 TAGE--------SCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANL 230

Query: 278 LMLTETQVKIWFQNRRMKWKRSKKAK----EQAAQEAEKQKGGGGGAG 321
           L LTE Q+KIWFQNRRMK+K+ +KAK      A+Q  E+    GG AG
Sbjct: 231 LNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAG 278



 Score = 31.2 bits (69), Expect = 1.7
 Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 15/99 (15%)

Query: 17  PPRAASAQS-APLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRA 75
           P  A S QS APL       A  +G+    G G + GG  G      S+PP   +++   
Sbjct: 64  PGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGG------SQPPGLNSEQQPP 117

Query: 76  ESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPH 114
           + P PP  L       P        GGG       GGP+
Sbjct: 118 QPPPPPPTLPPSSPTNP--------GGGVPAKKPKGGPN 148


>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 13/106 (12%)

Query: 240 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 299
           K RR RTAFT +QL+ LE++F+  +YLS  +R  +A SL LTETQVKIWFQNRR KWK+ 
Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243

Query: 300 KKAKEQAAQ-----EAEKQKGGGGGAGKGGAEEPGAEELLGPPAPG 340
               + AAQ           GGGGG G GG+         GPP  G
Sbjct: 244 NPGADGAAQVGGGAPQPGAAGGGGGGGSGGSP--------GPPGTG 281



 Score = 33.5 bits (75), Expect = 0.35
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%)

Query: 92  PKPGFLGAGGGGGGTGGGHGGP------HHHAHPGAAAAAAAAAAAAA 133
           P+PG   AGGGGGG  GG  GP      H    P  +AA     +AA+
Sbjct: 258 PQPG--AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAAS 303



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%)

Query: 38  ASGTGGGGGGGGASG--GTSG-------SCSPASSEPPAAPADRLRAESPSPP 81
           A+G GGGGG GG+ G  GT         S S A+   P+A +  L A +P  P
Sbjct: 262 AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSP 314



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 118 HPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAG 177
           +PGA  AA     A   G  A G   GG+ G  G P   AL+      YSAA      A 
Sbjct: 244 NPGADGAAQVGGGAPQPGA-AGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 302

Query: 178 QHP 180
             P
Sbjct: 303 SFP 305


>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 13/106 (12%)

Query: 240 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 299
           K RR RTAFT +QL+ LE++F+  +YLS  +R  +A SL LTETQVKIWFQNRR KWK+ 
Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243

Query: 300 KKAKEQAAQ-----EAEKQKGGGGGAGKGGAEEPGAEELLGPPAPG 340
               + AAQ           GGGGG G GG+         GPP  G
Sbjct: 244 NPGADGAAQVGGGAPQPGAAGGGGGGGSGGSP--------GPPGTG 281



 Score = 33.5 bits (75), Expect = 0.35
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%)

Query: 92  PKPGFLGAGGGGGGTGGGHGGP------HHHAHPGAAAAAAAAAAAAA 133
           P+PG   AGGGGGG  GG  GP      H    P  +AA     +AA+
Sbjct: 258 PQPG--AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAAS 303



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%)

Query: 38  ASGTGGGGGGGGASG--GTSG-------SCSPASSEPPAAPADRLRAESPSPP 81
           A+G GGGGG GG+ G  GT         S S A+   P+A +  L A +P  P
Sbjct: 262 AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSP 314



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 118 HPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAG 177
           +PGA  AA     A   G  A G   GG+ G  G P   AL+      YSAA      A 
Sbjct: 244 NPGADGAAQVGGGAPQPGA-AGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 302

Query: 178 QHP 180
             P
Sbjct: 303 SFP 305


>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 13/106 (12%)

Query: 240 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 299
           K RR RTAFT +QL+ LE++F+  +YLS  +R  +A SL LTETQVKIWFQNRR KWK+ 
Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243

Query: 300 KKAKEQAAQ-----EAEKQKGGGGGAGKGGAEEPGAEELLGPPAPG 340
               + AAQ           GGGGG G GG+         GPP  G
Sbjct: 244 NPGADGAAQVGGGAPQPGAAGGGGGGGSGGSP--------GPPGTG 281



 Score = 33.5 bits (75), Expect = 0.35
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 8/48 (16%)

Query: 92  PKPGFLGAGGGGGGTGGGHGGP------HHHAHPGAAAAAAAAAAAAA 133
           P+PG   AGGGGGG  GG  GP      H    P  +AA     +AA+
Sbjct: 258 PQPG--AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAAS 303



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%)

Query: 38  ASGTGGGGGGGGASG--GTSG-------SCSPASSEPPAAPADRLRAESPSPP 81
           A+G GGGGG GG+ G  GT         S S A+   P+A +  L A +P  P
Sbjct: 262 AAGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAASFPLTAAAPGSP 314



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 118 HPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAG 177
           +PGA  AA     A   G  A G   GG+ G  G P   AL+      YSAA      A 
Sbjct: 244 NPGADGAAQVGGGAPQPGA-AGGGGGGGSGGSPGPPGTGALHFQTFPSYSAANVLFPSAA 302

Query: 178 QHP 180
             P
Sbjct: 303 SFP 305


>gi|24497538 homeobox C4 [Homo sapiens]
          Length = 264

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 20/190 (10%)

Query: 143 PGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIK 202
           PG ++G    PAQA  + HP    S    A  L+G   + S + P      P HP+    
Sbjct: 75  PGNSRGHG--PAQAG-HHHPEKSQSLCEPAP-LSGASASPSPAPPACSQPAPDHPSSAAS 130

Query: 203 LGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKL 262
                +   + +  ST        P++N        G+ +R RTA+T QQ+LELE +F  
Sbjct: 131 KQPIVYPWMKKIHVSTVN------PNYNG-------GEPKRSRTAYTRQQVLELEKEFHY 177

Query: 263 NKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGK 322
           N+YL+R +R E+A SL L+E Q+KIWFQNRRMKWK+  +      + A      G     
Sbjct: 178 NRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPP---AGAAPST 234

Query: 323 GGAEEPGAEE 332
             A  PG  E
Sbjct: 235 LSAATPGTSE 244


>gi|24497540 homeobox C4 [Homo sapiens]
          Length = 264

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 20/190 (10%)

Query: 143 PGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIK 202
           PG ++G    PAQA  + HP    S    A  L+G   + S + P      P HP+    
Sbjct: 75  PGNSRGHG--PAQAG-HHHPEKSQSLCEPAP-LSGASASPSPAPPACSQPAPDHPSSAAS 130

Query: 203 LGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKL 262
                +   + +  ST        P++N        G+ +R RTA+T QQ+LELE +F  
Sbjct: 131 KQPIVYPWMKKIHVSTVN------PNYNG-------GEPKRSRTAYTRQQVLELEKEFHY 177

Query: 263 NKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGK 322
           N+YL+R +R E+A SL L+E Q+KIWFQNRRMKWK+  +      + A      G     
Sbjct: 178 NRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPP---AGAAPST 234

Query: 323 GGAEEPGAEE 332
             A  PG  E
Sbjct: 235 LSAATPGTSE 244


>gi|24497517 homeobox A5 [Homo sapiens]
          Length = 270

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 79/271 (29%), Positives = 114/271 (42%), Gaps = 65/271 (23%)

Query: 42  GGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAAHC-ALLPKPGFLGAG 100
           G  G G   SG  + S + ++S  PA P     A S   P+     C A+ P PG     
Sbjct: 57  GRSGSGHFGSGERARSYAASASAAPAEPRYSQPATSTHSPQPDPLPCSAVAPSPG----- 111

Query: 101 GGGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYG 160
                +   HGG +  ++   A+A A +   ++  G+                       
Sbjct: 112 -----SDSHHGGKNSLSNSSGASADAGSTHISSREGV----------------------- 143

Query: 161 HPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAG 220
               G ++ A   A A    A + S P      PA PA P        Q+  W+R     
Sbjct: 144 ----GTASGAEEDAPASSEQASAQSEPS-----PAPPAQP--------QIYPWMRKLHI- 185

Query: 221 MILPKMPDFNSQAQSNLLG-KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLM 279
                       +  N+ G + +R RTA+T  Q LELE +F  N+YL+R +R E+A +L 
Sbjct: 186 ------------SHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 233

Query: 280 LTETQVKIWFQNRRMKWKRSKKAKEQAAQEA 310
           L+E Q+KIWFQNRRMKWK+  K K  +   A
Sbjct: 234 LSERQIKIWFQNRRMKWKKDNKLKSMSMAAA 264


>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
          Length = 330

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 77/231 (33%), Positives = 103/231 (44%), Gaps = 41/231 (17%)

Query: 98  GAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAA-----AAAGGLALGLHPGGAQGGAGL 152
           GAGG G    GG GGP   A  G A +      +     A AGG   G   GG+ GGAG 
Sbjct: 67  GAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPG-GGGGSSGGAGA 125

Query: 153 PAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQ 212
            + A +   P +   A A A      HP      P   G  P  P+ P   G        
Sbjct: 126 LSAAGVIRVPAHRPLAGAVA------HPQ-----PLATGL-PTVPSVPAMPGVNNL---- 169

Query: 213 WLRASTAGMILPKMPDFNSQAQSNLLG---------KCRRPRTAFTSQQLLELEHQFKLN 263
                  G+  P M       +    G         K ++PRT+FT  Q+ ELE +F   
Sbjct: 170 ------TGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQ 223

Query: 264 KYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQK 314
           KYL+  +R  +A +L +T+ QVK WFQNRR KW+R + A+E   +EAE+Q+
Sbjct: 224 KYLASAERAALAKALKMTDAQVKTWFQNRRTKWRR-QTAEE---REAERQQ 270



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 31/91 (34%), Positives = 34/91 (37%), Gaps = 16/91 (17%)

Query: 36  AAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPG 95
           A A GTGG GG GG +GG  G+CS                 S +    LA      P PG
Sbjct: 71  AGAYGTGGPGGPGGPAGG-GGACSMGPL-----------TGSYNVNMALAGG----PGPG 114

Query: 96  FLGAGGGGGGTGGGHGGPHHHAHPGAAAAAA 126
             G   GG G     G     AH   A A A
Sbjct: 115 GGGGSSGGAGALSAAGVIRVPAHRPLAGAVA 145



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 27  PLALVTSLAAAASGTGGGGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAA 86
           PL    ++  A +G  G GGGGG+SGG +G+ S A       PA R  A + + P+ LA 
Sbjct: 96  PLTGSYNVNMALAGGPGPGGGGGSSGG-AGALSAAG--VIRVPAHRPLAGAVAHPQPLAT 152

Query: 87  HCALLP 92
               +P
Sbjct: 153 GLPTVP 158


>gi|85068580 homeobox B7 [Homo sapiens]
          Length = 217

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 74/216 (34%), Positives = 94/216 (43%), Gaps = 42/216 (19%)

Query: 119 PGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQ 178
           PG  A + A+ AA+  G     L+PGG  GG               G SAA   AA  G 
Sbjct: 41  PGYGAGSGASFAASMQG-----LYPGG--GGMA-------------GQSAAGVYAAGYGL 80

Query: 179 HPAL--SYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSN 236
            P+    +  P  Q      P D  K      Q D  L A +   I P M    +     
Sbjct: 81  EPSSFNMHCAPFEQNLSGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDR--- 137

Query: 237 LLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKW 296
                +R R  +T  Q LELE +F  N+YL+R +R E+A +L LTE Q+KIWFQNRRMKW
Sbjct: 138 -----KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKW 192

Query: 297 KRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEE 332
           K+            E +  G G  G+  AE    EE
Sbjct: 193 KK------------ENKTAGPGTTGQDRAEAEEEEE 216


>gi|7710121 engrailed homeobox 2 [Homo sapiens]
          Length = 333

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 85/305 (27%), Positives = 116/305 (38%), Gaps = 65/305 (21%)

Query: 6   NFRIDALLAVDPPRAASAQSAPLALVTSLAAAASGTGGGGGG-GGASGGTSGSCSPASSE 64
           NF ID +L  +  R   A        T  A A  G GGG GG GGASG   G  +  S +
Sbjct: 68  NFFIDNILRPEFGRRKDAG-------TCCAGAGGGRGGGAGGEGGASGAEGGGGAGGSEQ 120

Query: 65  PPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGG--TGGGHGGPHHHAHPGAA 122
              + +   R   P  P         LP  G    G G GG  T   HGG      PG  
Sbjct: 121 LLGSGSREPRQNPPCAPGAGGP----LPAAGSDSPGDGEGGSKTLSLHGGAKKGGDPGGP 176

Query: 123 AAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPAL 182
              +  A     G L++      +Q GA L AQ  L+  P + Y    +    +G     
Sbjct: 177 LDGSLKARGLGGGDLSVSSDSDSSQAGANLGAQPMLW--PAWVYCTRYSDRPSSG----- 229

Query: 183 SYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCR 242
                                                       P      + N   + +
Sbjct: 230 --------------------------------------------PRSRKPKKKNPNKEDK 245

Query: 243 RPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKA 302
           RPRTAFT++QL  L+ +F+ N+YL+  +R  +A  L L E+Q+KIWFQN+R K K++   
Sbjct: 246 RPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIKKATGN 305

Query: 303 KEQAA 307
           K   A
Sbjct: 306 KNTLA 310


>gi|15029506 homeobox D8 [Homo sapiens]
          Length = 290

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 72/242 (29%), Positives = 95/242 (39%), Gaps = 18/242 (7%)

Query: 102 GGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGH 161
           G    G  H  P  HAHP  +   +        G      HPGG    A   A      H
Sbjct: 55  GNSAAGFPHAPPQAHAHPHPSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPH 114

Query: 162 PVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGM 221
           P                 PA  Y Y  +Q         PI       +L Q+    ++  
Sbjct: 115 PPPPPPPPPCGGIACHGEPAKFYGYDNLQ-------RQPIFTTQQEAELVQYPDCKSSSG 167

Query: 222 ILPKMPDFNSQAQS----------NLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKR 271
            + + PD  +Q+ S                RR R  ++  Q LELE +F  N YL+R +R
Sbjct: 168 NIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRR 227

Query: 272 FEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAE 331
            EV+ +L LTE QVKIWFQNRRMKWK+    K++     ++ K G         EE  AE
Sbjct: 228 IEVSHALALTERQVKIWFQNRRMKWKKENN-KDKFPVSRQEVKDGETKKEAQELEEDRAE 286

Query: 332 EL 333
            L
Sbjct: 287 GL 288


>gi|147901462 brain specific homeobox [Homo sapiens]
          Length = 233

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 67/175 (38%), Positives = 91/175 (52%), Gaps = 18/175 (10%)

Query: 172 AAALAGQHPALSYSYPQVQ-----GAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKM 226
           A++LA + P L Y YP +        H  HP     L  G      +L  +T+GM +P +
Sbjct: 42  ASSLASRVPLLDYGYPLMPTPTLLAPHAHHP-----LHKGDHHHPYFL--TTSGMPVPAL 94

Query: 227 PDFNSQAQSNLLGK-CRR--PRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTET 283
             F     + L GK CRR   RT F+  QL  LE +F++ +YLS P+R E+AT+L L+ET
Sbjct: 95  --FPHPQHAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSET 152

Query: 284 QVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEELLGPPA 338
           QVK WFQNRRMK K+  + K Q   +A        G+ +G      AE  L  PA
Sbjct: 153 QVKTWFQNRRMKHKKQLR-KSQDEPKAPDGPESPEGSPRGSEAATAAEARLSLPA 206


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 89/302 (29%), Positives = 120/302 (39%), Gaps = 46/302 (15%)

Query: 106 TGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYG 165
           + GGH   H  +       +A  +   + G   L   P  A   A  P Q A        
Sbjct: 57  SAGGHPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPA-------- 108

Query: 166 YSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIK---LGAGTF--QLDQWLRASTAG 220
                 A   A   P  S S PQ    +P  PA+  K   L + T   Q+  W++ S   
Sbjct: 109 --PQPPAPTPAAPPPPSSASPPQNASNNPT-PANAAKSPLLNSPTVAKQIFPWMKESRQN 165

Query: 221 MILPKMPDFNSQAQSNLLG--------KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRF 272
               K    +S +  +  G          +R RTA+TS QL+ELE +F  N+YL RP+R 
Sbjct: 166 T---KQKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRV 222

Query: 273 EVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEE 332
           E+A  L LTE Q+KIWFQNRRMK+K+ +K K              G     G + P    
Sbjct: 223 EMANLLNLTERQIKIWFQNRRMKYKKDQKGK--------------GMLTSSGGQSPSR-- 266

Query: 333 LLGPPAPGDKGSGRRLRDLRDSDPEEDEDEDDEDHFPYSNGASVHAASSDCSSEDDSPPP 392
              P  PG  G    +  L +S P E +        P      +  AS   S    +PPP
Sbjct: 267 --SPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSK-PPQGTYGLPPASYPASLPSCAPPP 323

Query: 393 RP 394
            P
Sbjct: 324 PP 325


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 89/302 (29%), Positives = 120/302 (39%), Gaps = 46/302 (15%)

Query: 106 TGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYG 165
           + GGH   H  +       +A  +   + G   L   P  A   A  P Q A        
Sbjct: 57  SAGGHPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQPPQPA-------- 108

Query: 166 YSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIK---LGAGTF--QLDQWLRASTAG 220
                 A   A   P  S S PQ    +P  PA+  K   L + T   Q+  W++ S   
Sbjct: 109 --PQPPAPTPAAPPPPSSASPPQNASNNPT-PANAAKSPLLNSPTVAKQIFPWMKESRQN 165

Query: 221 MILPKMPDFNSQAQSNLLG--------KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRF 272
               K    +S +  +  G          +R RTA+TS QL+ELE +F  N+YL RP+R 
Sbjct: 166 T---KQKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRV 222

Query: 273 EVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGGAEEPGAEE 332
           E+A  L LTE Q+KIWFQNRRMK+K+ +K K              G     G + P    
Sbjct: 223 EMANLLNLTERQIKIWFQNRRMKYKKDQKGK--------------GMLTSSGGQSPSR-- 266

Query: 333 LLGPPAPGDKGSGRRLRDLRDSDPEEDEDEDDEDHFPYSNGASVHAASSDCSSEDDSPPP 392
              P  PG  G    +  L +S P E +        P      +  AS   S    +PPP
Sbjct: 267 --SPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSK-PPQGTYGLPPASYPASLPSCAPPP 323

Query: 393 RP 394
            P
Sbjct: 324 PP 325


>gi|23397672 homeobox D4 [Homo sapiens]
          Length = 255

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 65/178 (36%), Positives = 84/178 (47%), Gaps = 22/178 (12%)

Query: 144 GGAQGGAGLPAQAALYGHPVYGYS---------AAAAAAALAGQHPALSYSYPQVQG--- 191
           GGAQG    P    LY  P +G            +A  A   GQ P     +    G   
Sbjct: 39  GGAQGADFQPP--GLYPRPDFGEQPFGGSGPGPGSALPARGHGQEPGGPGGHYAAPGEPC 96

Query: 192 -AHPAHPADPIKLGAGTFQLDQWLRASTAGMILP-------KMPDFNSQAQSNLLGKCRR 243
            A PA P  P+       Q D     S   +  P       K    NS   +   G+ +R
Sbjct: 97  PAPPAPPPAPLPGARAYSQSDPKQPPSGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKR 156

Query: 244 PRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKK 301
            RTA+T QQ+LELE +F  N+YL+R +R E+A +L L+E Q+KIWFQNRRMKWK+  K
Sbjct: 157 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.130    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,942,812
Number of Sequences: 37866
Number of extensions: 1375974
Number of successful extensions: 37171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 979
Number of HSP's that attempted gapping in prelim test: 14306
Number of HSP's gapped (non-prelim): 12933
length of query: 401
length of database: 18,247,518
effective HSP length: 104
effective length of query: 297
effective length of database: 14,309,454
effective search space: 4249907838
effective search space used: 4249907838
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.