Guide to the Human Genome
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Name: POLR3G Sequence: fasta or formatted (223aa) NCBI GI: 115529475
Description:

polymerase (RNA) III (DNA directed) polypeptide G (32kD)

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         12           2
 C cysteine            0.4          1           1
 D aspartate          11.2         25           7
 E glutamate          16.6         37           3
 F phenylalanine       2.7          6           1
 G glycine             7.2         16           1
 H histidine           0.0          0           0
 I isoleucine          2.2          5           1
 K lysine             12.1         27           2
 L leucine             4.9         11           1
 M methionine          4.0          9           2
 N asparagine          3.6          8           1
 P proline             6.7         15           3
 Q glutamine           1.8          4           1
 R arginine            5.4         12           2
 S serine              3.1          7           1
 T threonine           4.0          9           1
 V valine              2.7          6           2
 W tryptophan          0.9          2           1
 Y tyrosine            4.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polymerase (RNA) III (DNA directed) polypeptide G (... 
POLR3GL               0.411   polymerase (RNA) III (DNA directed) polypeptide G (3...
LOC647055             0.170   PREDICTED: similar to hCG1790759 
LOC647055             0.170   PREDICTED: similar to hCG1790759 
LOC647055             0.170   PREDICTED: similar to hCG1790759 
UBTF                  0.070   upstream binding transcription factor, RNA polymera...
UBTF                  0.070   upstream binding transcription factor, RNA polymera...
UBTF                  0.070   upstream binding transcription factor, RNA polymerase...
DDX46                 0.064   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
SUPT5H                0.061   suppressor of Ty 5 homolog isoform b 
SUPT5H                0.059   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.059   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.059   suppressor of Ty 5 homolog isoform a 
LOC647020             0.057   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.057   PREDICTED: similar to acidic (leucine-rich) nuclear...
PELP1                 0.057   proline, glutamic acid and leucine rich protein 1 [...
MYT1L                 0.057   myelin transcription factor 1-like 
CENPB                 0.057   centromere protein B 
FAM9A                 0.055   family with sequence similarity 9, member A 
YTHDC1                0.055   splicing factor YT521-B isoform 2 
YTHDC1                0.055   splicing factor YT521-B isoform 1 
CDC2L2                0.052   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.052   cell division cycle 2-like 2 isoform 1 
MYT1                  0.052   myelin transcription factor 1 
ANP32B                0.052   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
MYST4                 0.052   MYST histone acetyltransferase (monocytic leukemia)...
CDC2L1                0.052   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.052   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.052   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.052   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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