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Search of human proteins with 14149631
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14149631 ring finger protein 112 [Homo sapiens]
(632 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14149631 ring finger protein 112 [Homo sapiens] 1286 0.0
gi|189181742 atlastin GTPase 1 isoform b [Homo sapiens] 95 2e-19
gi|74024917 atlastin GTPase 1 isoform b [Homo sapiens] 95 2e-19
gi|19923445 atlastin GTPase 1 isoform a [Homo sapiens] 95 2e-19
gi|45827806 atlastin 3 [Homo sapiens] 87 6e-17
gi|208610002 atlastin GTPase 2 isoform 2 [Homo sapiens] 86 8e-17
gi|208610000 atlastin GTPase 2 isoform 1 [Homo sapiens] 86 8e-17
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 63 9e-10
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 62 1e-09
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 62 1e-09
gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo sap... 59 2e-08
gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo sap... 59 2e-08
gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo ... 59 2e-08
gi|225903455 tripartite motif-containing 77 [Homo sapiens] 59 2e-08
gi|4508005 tripartite motif-containing 26 [Homo sapiens] 57 7e-08
gi|62865604 tripartite motif protein 31 [Homo sapiens] 52 2e-06
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 52 2e-06
gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens] 52 2e-06
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens] 51 3e-06
gi|112421127 tripartite motif-containing 58 [Homo sapiens] 51 3e-06
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 51 4e-06
gi|68160937 tripartite motif-containing 25 [Homo sapiens] 50 5e-06
gi|210147600 tripartite motif-containing 64 [Homo sapiens] 50 6e-06
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi... 50 6e-06
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 50 6e-06
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 50 6e-06
gi|15208660 tripartite motif protein 21 [Homo sapiens] 50 6e-06
gi|22749269 ring finger protein 129 [Homo sapiens] 50 6e-06
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 49 1e-05
gi|5730009 ret finger protein [Homo sapiens] 49 1e-05
>gi|14149631 ring finger protein 112 [Homo sapiens]
Length = 632
Score = 1286 bits (3328), Expect = 0.0
Identities = 632/632 (100%), Positives = 632/632 (100%)
Query: 1 MPRPALSVTSFCHRLGKRERKQSFMGNSGNSWSHTPFPKLELGLGPQPMAPRELPTCSIC 60
MPRPALSVTSFCHRLGKRERKQSFMGNSGNSWSHTPFPKLELGLGPQPMAPRELPTCSIC
Sbjct: 1 MPRPALSVTSFCHRLGKRERKQSFMGNSGNSWSHTPFPKLELGLGPQPMAPRELPTCSIC 60
Query: 61 LERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMKLLPQR 120
LERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMKLLPQR
Sbjct: 61 LERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMKLLPQR 120
Query: 121 PLPPALQETCPVRAEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHS 180
PLPPALQETCPVRAEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHS
Sbjct: 121 PLPPALQETCPVRAEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHS 180
Query: 181 GKSFLLNHLLQGLPGLESGEGGRPRGGEASLQGCRWGANGLARGIWMWSHPFLLGKEGKK 240
GKSFLLNHLLQGLPGLESGEGGRPRGGEASLQGCRWGANGLARGIWMWSHPFLLGKEGKK
Sbjct: 181 GKSFLLNHLLQGLPGLESGEGGRPRGGEASLQGCRWGANGLARGIWMWSHPFLLGKEGKK 240
Query: 241 VAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEV 300
VAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEV
Sbjct: 241 VAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEV 300
Query: 301 MGKHYGMVPIQHLDLLVRDSSHPNKAGQGHVGNIFQRLSGRYPKVQELLQGKRARCCLLP 360
MGKHYGMVPIQHLDLLVRDSSHPNKAGQGHVGNIFQRLSGRYPKVQELLQGKRARCCLLP
Sbjct: 301 MGKHYGMVPIQHLDLLVRDSSHPNKAGQGHVGNIFQRLSGRYPKVQELLQGKRARCCLLP 360
Query: 361 APGRRRMNQGHASPGGDTDDDFRHLLGAYVSDVLSAAPQHAKSRCQGYWNEGRAVARGDR 420
APGRRRMNQGHASPGGDTDDDFRHLLGAYVSDVLSAAPQHAKSRCQGYWNEGRAVARGDR
Sbjct: 361 APGRRRMNQGHASPGGDTDDDFRHLLGAYVSDVLSAAPQHAKSRCQGYWNEGRAVARGDR 420
Query: 421 RLLTGQQLAQEIKNLSGWMGRTGPGFTSPDEMAAQLHDLRKVEAAKREFEEYVRQQDVAT 480
RLLTGQQLAQEIKNLSGWMGRTGPGFTSPDEMAAQLHDLRKVEAAKREFEEYVRQQDVAT
Sbjct: 421 RLLTGQQLAQEIKNLSGWMGRTGPGFTSPDEMAAQLHDLRKVEAAKREFEEYVRQQDVAT 480
Query: 481 KRIFSALRVLPDTMRNLLSTQKDAILARHGVALLCKGRDQTLEALEAELQATAKAFMDSY 540
KRIFSALRVLPDTMRNLLSTQKDAILARHGVALLCKGRDQTLEALEAELQATAKAFMDSY
Sbjct: 481 KRIFSALRVLPDTMRNLLSTQKDAILARHGVALLCKGRDQTLEALEAELQATAKAFMDSY 540
Query: 541 TMRFCGHLAAVGGAVGAGLMGLAGGVVGAGMAAAALAAEAGMVAAGAAVGATGAAVVGGG 600
TMRFCGHLAAVGGAVGAGLMGLAGGVVGAGMAAAALAAEAGMVAAGAAVGATGAAVVGGG
Sbjct: 541 TMRFCGHLAAVGGAVGAGLMGLAGGVVGAGMAAAALAAEAGMVAAGAAVGATGAAVVGGG 600
Query: 601 VGAGLAATVGCMEKEEDERLLEGDREPLLQEE 632
VGAGLAATVGCMEKEEDERLLEGDREPLLQEE
Sbjct: 601 VGAGLAATVGCMEKEEDERLLEGDREPLLQEE 632
>gi|189181742 atlastin GTPase 1 isoform b [Homo sapiens]
Length = 553
Score = 95.1 bits (235), Expect = 2e-19
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 127 QETCPVR-AEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFL 185
+E PV+ A P+ ++ + L A+NR L RD V ++V G GKSFL
Sbjct: 24 EEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFL 83
Query: 186 LNHLLQGLPGLES----GEGGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLLGK-EG 238
++ +L+ + ES G+ P L G W G+ GI +WS FL+ K +G
Sbjct: 84 MDFMLRYMYNQESVDWVGDYNEP------LTGFSWRGGSERETTGIQIWSEIFLINKPDG 137
Query: 239 KKVAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVA 298
KKVAV L+DT + + + AL+TM+SS Q+ + SQ +++ DL +L++F
Sbjct: 138 KKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYG 197
Query: 299 EVMGKHYGMVPIQHLDLLVRDSSHPNKAGQGHVGN---IFQRLSGRYPKVQELLQGKR-- 353
+ + + P Q L LVRD S P + G G + +RL + +EL ++
Sbjct: 198 RLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHI 257
Query: 354 ------ARCCLLPAPGRR-RMNQGHASPGGDTDDDF 382
C LLP PG + N + DD+F
Sbjct: 258 HSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEF 293
>gi|74024917 atlastin GTPase 1 isoform b [Homo sapiens]
Length = 553
Score = 95.1 bits (235), Expect = 2e-19
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 127 QETCPVR-AEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFL 185
+E PV+ A P+ ++ + L A+NR L RD V ++V G GKSFL
Sbjct: 24 EEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFL 83
Query: 186 LNHLLQGLPGLES----GEGGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLLGK-EG 238
++ +L+ + ES G+ P L G W G+ GI +WS FL+ K +G
Sbjct: 84 MDFMLRYMYNQESVDWVGDYNEP------LTGFSWRGGSERETTGIQIWSEIFLINKPDG 137
Query: 239 KKVAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVA 298
KKVAV L+DT + + + AL+TM+SS Q+ + SQ +++ DL +L++F
Sbjct: 138 KKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYG 197
Query: 299 EVMGKHYGMVPIQHLDLLVRDSSHPNKAGQGHVGN---IFQRLSGRYPKVQELLQGKR-- 353
+ + + P Q L LVRD S P + G G + +RL + +EL ++
Sbjct: 198 RLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHI 257
Query: 354 ------ARCCLLPAPGRR-RMNQGHASPGGDTDDDF 382
C LLP PG + N + DD+F
Sbjct: 258 HSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEF 293
>gi|19923445 atlastin GTPase 1 isoform a [Homo sapiens]
Length = 558
Score = 95.1 bits (235), Expect = 2e-19
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 127 QETCPVR-AEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFL 185
+E PV+ A P+ ++ + L A+NR L RD V ++V G GKSFL
Sbjct: 24 EEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFL 83
Query: 186 LNHLLQGLPGLES----GEGGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLLGK-EG 238
++ +L+ + ES G+ P L G W G+ GI +WS FL+ K +G
Sbjct: 84 MDFMLRYMYNQESVDWVGDYNEP------LTGFSWRGGSERETTGIQIWSEIFLINKPDG 137
Query: 239 KKVAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVA 298
KKVAV L+DT + + + AL+TM+SS Q+ + SQ +++ DL +L++F
Sbjct: 138 KKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYG 197
Query: 299 EVMGKHYGMVPIQHLDLLVRDSSHPNKAGQGHVGN---IFQRLSGRYPKVQELLQGKR-- 353
+ + + P Q L LVRD S P + G G + +RL + +EL ++
Sbjct: 198 RLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHI 257
Query: 354 ------ARCCLLPAPGRR-RMNQGHASPGGDTDDDF 382
C LLP PG + N + DD+F
Sbjct: 258 HSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEF 293
>gi|45827806 atlastin 3 [Homo sapiens]
Length = 541
Score = 86.7 bits (213), Expect = 6e-17
Identities = 77/249 (30%), Positives = 115/249 (46%), Gaps = 21/249 (8%)
Query: 165 RDTPVCLLAVLGEQHSGKSFLLNHLLQGLPGL-ESGEGGRPRGGEASLQGCRW--GANGL 221
RD V +++V G GKSF+L+ +L+ L ESG E L G W G++
Sbjct: 56 RDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQKESGHSNWLGDPEEPLTGFSWRGGSDPE 115
Query: 222 ARGIWMWSHPFLLGKEG-KKVAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTS 280
GI +WS F + K G KKVAV L+DT A + + + + AL+TM SS QI + S
Sbjct: 116 TTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKDCATIFALSTMTSSVQIYNLS 175
Query: 281 QELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVRDSSHPNKAG---QGHVGNIFQR 337
Q +++ DL L++F + P Q L LVRD S P + QG + + +R
Sbjct: 176 QNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSFPYEYSYGLQGGMAFLDKR 235
Query: 338 LSGRYPKVQELLQGKR--------ARCCLLPAPGRRRMNQGHASPGGDTDDDFRHLLGAY 389
L + + +E+ + C LLP PG Q SP D D + + G +
Sbjct: 236 LQVKEHQHEEIQNVRNHIHSCFSDVTCFLLPHPGL----QVATSP--DFDGKLKDIAGEF 289
Query: 390 VSDVLSAAP 398
+ + P
Sbjct: 290 KEQLQALIP 298
>gi|208610002 atlastin GTPase 2 isoform 2 [Homo sapiens]
Length = 583
Score = 86.3 bits (212), Expect = 8e-17
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 17/248 (6%)
Query: 154 AINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGLPGLESGEGGRPRGGEASLQG 213
A+ + L RD + +++V G GKSFLL+ +L+ + +S G L G
Sbjct: 79 ALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSW--IGGNNEPLTG 136
Query: 214 CRW--GANGLARGIWMWSHPFLLGK-EGKKVAVFLVDTGDAMSPELSRETRIKLCALTTM 270
W G GI +W+ F++ + G KVAV L+DT A + + + + AL+TM
Sbjct: 137 FTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALSTM 196
Query: 271 LSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVRDSSHPNKAGQGH 330
SS Q+ + SQ +++ DL +L++F + + P Q L L+RD S+P + G
Sbjct: 197 TSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGL 256
Query: 331 VGN---IFQRLSGRYPKVQELLQGKR--------ARCCLLPAPGRR-RMNQGHASPGGDT 378
G + +RL + + +EL ++ C LLP PG + N D
Sbjct: 257 EGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDI 316
Query: 379 DDDFRHLL 386
D+DF+ L
Sbjct: 317 DEDFKREL 324
>gi|208610000 atlastin GTPase 2 isoform 1 [Homo sapiens]
Length = 579
Score = 86.3 bits (212), Expect = 8e-17
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 17/248 (6%)
Query: 154 AINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGLPGLESGEGGRPRGGEASLQG 213
A+ + L RD + +++V G GKSFLL+ +L+ + +S G L G
Sbjct: 79 ALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMYNKDSQSW--IGGNNEPLTG 136
Query: 214 CRW--GANGLARGIWMWSHPFLLGK-EGKKVAVFLVDTGDAMSPELSRETRIKLCALTTM 270
W G GI +W+ F++ + G KVAV L+DT A + + + + AL+TM
Sbjct: 137 FTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQSTIKDCATVFALSTM 196
Query: 271 LSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVRDSSHPNKAGQGH 330
SS Q+ + SQ +++ DL +L++F + + P Q L L+RD S+P + G
Sbjct: 197 TSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGL 256
Query: 331 VGN---IFQRLSGRYPKVQELLQGKR--------ARCCLLPAPGRR-RMNQGHASPGGDT 378
G + +RL + + +EL ++ C LLP PG + N D
Sbjct: 257 EGGKQFLEKRLQVKQNQHEELQNVRKHIHNCFSNLGCFLLPHPGLKVATNPSFDGRLKDI 316
Query: 379 DDDFRHLL 386
D+DF+ L
Sbjct: 317 DEDFKREL 324
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 62.8 bits (151), Expect = 9e-10
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 52 RELPTCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQK-----RG 106
+E TC+ICL+ DP+ DCGH+FC C P CPECR++ Q+ R
Sbjct: 11 QEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQRNLRPNRP 70
Query: 107 LRSLGEKMKLLPQRPLPPALQETCPVRAEPL 137
L + E + L P P Q CP EPL
Sbjct: 71 LAKMAEMARRL--HPPSPVPQGVCPAHREPL 99
>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
sapiens]
Length = 500
Score = 62.4 bits (150), Expect = 1e-09
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECR-----KICKQKRGLRSL 110
TC ICL+ +DP+S++CGH+FC C + PG P CPECR + L L
Sbjct: 11 TCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAALRPNWALARL 70
Query: 111 GEKMKLLPQRPLPPALQETCPVRAEPLLL 139
EK + P+PP L C EPL L
Sbjct: 71 TEKTQRRRLGPVPPGL---CGRHWEPLRL 96
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 62.4 bits (150), Expect = 1e-09
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECR-----KICKQKRGLRSL 110
TC ICL+ +DP+S++CGH+FC C + PG P CPECR + L L
Sbjct: 11 TCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAALRPNWALARL 70
Query: 111 GEKMKLLPQRPLPPALQETCPVRAEPLLL 139
EK + P+PP L C EPL L
Sbjct: 71 TEKTQRRRLGPVPPGL---CGRHWEPLRL 96
>gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMK 115
TCSIC + L DP+++ CGH FC C P CCP CR+I +Q R + + +
Sbjct: 14 TCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREISQQMYFKRIIFAEKQ 73
Query: 116 LLPQRPLPPALQETCPVRAEPLLLVR 141
++P R P C + + +L+ R
Sbjct: 74 VIPTRESVP-----CQLSSSAMLICR 94
>gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMK 115
TCSIC + L DP+++ CGH FC C P CCP CR+I +Q R + + +
Sbjct: 14 TCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREISQQMYFKRIIFAEKQ 73
Query: 116 LLPQRPLPPALQETCPVRAEPLLLVR 141
++P R P C + + +L+ R
Sbjct: 74 VIPTRESVP-----CQLSSSAMLICR 94
>gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo
sapiens]
Length = 450
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMK 115
TCSIC + L DP+++ CGH FC C P CCP CR+I +Q R + + +
Sbjct: 14 TCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREISQQMYFKRIIFAEKQ 73
Query: 116 LLPQRPLPPALQETCPVRAEPLLLVR 141
++P R P C + + +L+ R
Sbjct: 74 VIPTRESVP-----CQLSSSAMLICR 94
>gi|225903455 tripartite motif-containing 77 [Homo sapiens]
Length = 450
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMK 115
TCSIC + L DP+++ CGH FC C P CCP CR+I +Q R + + +
Sbjct: 14 TCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREISQQMYFKRIIFAEKQ 73
Query: 116 LLPQRPLPPALQETCPVRAEPLLLVR 141
++P R P C + + +L+ R
Sbjct: 74 VIPTRESVP-----CQLSSSAMLICR 94
>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
Length = 539
Score = 56.6 bits (135), Expect = 7e-08
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQK 104
TCSICL+ LRDP+++DCGH FC C + R P CP C+K K++
Sbjct: 15 TCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKE 63
>gi|62865604 tripartite motif protein 31 [Homo sapiens]
Length = 425
Score = 51.6 bits (122), Expect = 2e-06
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 57 CSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQ-----KRGLRSLG 111
C ICL+ L+ P+++DCGH+FC++C + C CP C+ ++ LR+L
Sbjct: 16 CPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIRFNSLLRNLV 75
Query: 112 EKMKLLPQRPLPPALQE-TCPVRAE 135
EK++ L + +E TCP E
Sbjct: 76 EKIQALQASEVQSKRKEATCPRHQE 100
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 51.6 bits (122), Expect = 2e-06
Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFS-THRLPGC--------EPPC---CPECRKICK- 102
TCSICLE R+P+S++CGH FC C PG PP CP+CR+ +
Sbjct: 28 TCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLPCPQCREPARP 87
Query: 103 -QKRGLRSLGEKMKLLPQRPLPPA 125
Q R R L LL + LP A
Sbjct: 88 SQLRPNRQLAAVATLLRRFSLPAA 111
>gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens]
Length = 221
Score = 51.6 bits (122), Expect = 2e-06
Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFS-THRLPGC--------EPPC---CPECRKICK- 102
TCSICLE R+P+S++CGH FC C PG PP CP+CR+ +
Sbjct: 28 TCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLPCPQCREPARP 87
Query: 103 -QKRGLRSLGEKMKLLPQRPLPPA 125
Q R R L LL + LP A
Sbjct: 88 SQLRPNRQLAAVATLLRRFSLPAA 111
>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
Length = 500
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 57 CSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKR-----GLRSLG 111
C +C + RDP+ L CGH+FC C + CPEC+ +C+ L L
Sbjct: 41 CPLCNDWFRDPLMLSCGHNFCEACIQDFWRLQAKETFCPECKMLCQYNNCTFNPVLDKLV 100
Query: 112 EKMKLLPQRPLPPALQETCPVRAEPLLL 139
EK+K LP P CP E L L
Sbjct: 101 EKIKKLPLLKGHP----QCPEHGENLKL 124
>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
Length = 486
Score = 51.2 bits (121), Expect = 3e-06
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 12/55 (21%)
Query: 52 RELPTCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPP--------CCPECR 98
RE C +CL+ L++P+S+DCGH FC+RC S CE CP+CR
Sbjct: 11 REDARCPVCLDFLQEPVSVDCGHSFCLRCISEF----CEKSDGAQGGVYACPQCR 61
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 50.8 bits (120), Expect = 4e-06
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 57 CSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQ 103
CSICL+ L DP++++CGH+FC C L E CP CR C++
Sbjct: 16 CSICLDYLSDPVTIECGHNFCRSCIQQSWLDLQELFPCPVCRHQCQE 62
>gi|68160937 tripartite motif-containing 25 [Homo sapiens]
Length = 630
Score = 50.4 bits (119), Expect = 5e-06
Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRS---LGE 112
+CSICLE ++P++ CGH+FC C + P CP+CR + + + L L
Sbjct: 12 SCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQARPQLHKNTVLCN 71
Query: 113 KMKLLPQRPL---PPALQETCPVRAEPLLLVRINASGGLILRMGAINRCLKHPLARDTPV 169
++ Q L PPA T P R AS A + CLK + V
Sbjct: 72 VVEQFLQADLAREPPADVWTPPAR----------ASAPSPNAQVACDHCLKEAAVKTCLV 121
Query: 170 CLLAVLGEQ---HSGKSFLLNHLLQ 191
C+ + E H +H LQ
Sbjct: 122 CMASFCQEHLQPHFDSPAFQDHPLQ 146
>gi|210147600 tripartite motif-containing 64 [Homo sapiens]
Length = 449
Score = 50.1 bits (118), Expect = 6e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 57 CSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQ 103
C IC+ DP+++DCGH FC C G P CP CRKI ++
Sbjct: 15 CCICVNYFIDPVTIDCGHSFCRPCLCLCSEEGRAPMRCPSCRKISEK 61
>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
Length = 343
Score = 50.1 bits (118), Expect = 6e-06
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 52 RELPTCSICLERLRDPISLDCGHDFCIRCF-----------STHRLPGCEPPCCPECRKI 100
+E TCSICL+ DP+ CGH+FC C + G P CPECR++
Sbjct: 11 QEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFP--CPECREM 68
Query: 101 CKQKRGL--RSLGEKMKLLPQRPLPPALQETCPVRAEPLLL 139
Q+ L R L + ++ Q P Q+ C EPL L
Sbjct: 69 SPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKL 108
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 50.1 bits (118), Expect = 6e-06
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 52 RELPTCSICLERLRDPISLDCGHDFCIRCF-----------STHRLPGCEPPCCPECRKI 100
+E TCSICL+ DP+ CGH+FC C + G P CPECR++
Sbjct: 11 QEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFP--CPECREM 68
Query: 101 CKQKRGL--RSLGEKMKLLPQRPLPPALQETCPVRAEPLLL 139
Q+ L R L + ++ Q P Q+ C EPL L
Sbjct: 69 SPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKL 108
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 50.1 bits (118), Expect = 6e-06
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 52 RELPTCSICLERLRDPISLDCGHDFCIRCF-----------STHRLPGCEPPCCPECRKI 100
+E TCSICL+ DP+ CGH+FC C + G P CPECR++
Sbjct: 11 QEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFP--CPECREM 68
Query: 101 CKQKRGL--RSLGEKMKLLPQRPLPPALQETCPVRAEPLLL 139
Q+ L R L + ++ Q P Q+ C EPL L
Sbjct: 69 SPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKL 108
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 50.1 bits (118), Expect = 6e-06
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECR-----KICKQKRGLRSL 110
TC ICL+ +P+S++CGH FC C S G CP CR K + R L ++
Sbjct: 15 TCPICLDPFVEPVSIECGHSFCQECISQVGKGG--GSVCPVCRQRFLLKNLRPNRQLANM 72
Query: 111 GEKMKLLPQRPLPPALQETCPVRAEPLLL 139
+K + Q E C V E L L
Sbjct: 73 VNNLKEISQEAREGTQGERCAVHGERLHL 101
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 50.1 bits (118), Expect = 6e-06
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 52 RELPTCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECR-----KICKQKRG 106
+E +C ICLE L+DP++++CGH+FC C S + CP CR K ++
Sbjct: 11 QEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYKSFRRNPQ 70
Query: 107 LRSLGEKMKLLPQR 120
LR+L E K L R
Sbjct: 71 LRNLTEIAKQLQIR 84
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 49.3 bits (116), Expect = 1e-05
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52 RELPTCSICLERLRDPISLDCGHDFCIRCFSTHRLPGC---EPPCCPECR-----KICKQ 103
+E TC ICLE L P+SLDCGH FC C + + CP CR + +
Sbjct: 10 KEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRP 69
Query: 104 KRGLRSLGEKMKLLPQRPLPPALQETCPVRAEPLLL 139
R + +L EK++ + P + + C E LLL
Sbjct: 70 NRHVANLVEKLREVKLSPEGQKV-DHCARHGEKLLL 104
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 48.9 bits (115), Expect = 1e-05
Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 28/137 (20%)
Query: 56 TCSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMK 115
TC +CL+ +P+ LDCGH+ C C + CP+CR+ Q+
Sbjct: 15 TCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRH---------- 64
Query: 116 LLPQRPLPPALQETCPVRAEPLLLVRINASGGLILRMGAINRCLKH--PL-----ARDTP 168
+ P R L Q +R E R + GG MG C KH PL P
Sbjct: 65 MRPNRHLANVTQLVKQLRTE-----RPSGPGG---EMGV---CEKHREPLKLYCEEDQMP 113
Query: 169 VCLLAVLGEQHSGKSFL 185
+C++ +H G S L
Sbjct: 114 ICVVCDRSREHRGHSVL 130
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,652,051
Number of Sequences: 37866
Number of extensions: 1367157
Number of successful extensions: 7323
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 5994
Number of HSP's gapped (non-prelim): 980
length of query: 632
length of database: 18,247,518
effective HSP length: 108
effective length of query: 524
effective length of database: 14,157,990
effective search space: 7418786760
effective search space used: 7418786760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.