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Search of human proteins with 14149611
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14149611 empty spiracles homeobox 2 [Homo sapiens]
(252 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14149611 empty spiracles homeobox 2 [Homo sapiens] 521 e-148
gi|94536800 empty spiracles homolog 1 [Homo sapiens] 312 2e-85
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 84 9e-17
gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] 83 2e-16
gi|7110735 ventral anterior homeobox 2 [Homo sapiens] 82 3e-16
gi|23397672 homeobox D4 [Homo sapiens] 82 6e-16
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 82 6e-16
gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 80 1e-15
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 80 2e-15
gi|89257348 homeo box HB9 [Homo sapiens] 79 4e-15
gi|226437602 NK1 homeobox 2 [Homo sapiens] 77 2e-14
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 2e-14
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 2e-14
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 77 2e-14
gi|24497513 homeobox A3 isoform a [Homo sapiens] 76 2e-14
gi|13562112 homeobox A3 isoform a [Homo sapiens] 76 2e-14
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi... 76 2e-14
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 76 3e-14
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 76 3e-14
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 76 3e-14
gi|13273315 homeobox B4 [Homo sapiens] 75 4e-14
gi|14149728 BarH-like homeobox 1 [Homo sapiens] 75 5e-14
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 75 5e-14
gi|149588930 gastrulation brain homeo box 1 [Homo sapiens] 74 2e-13
gi|4504469 homeobox B5 [Homo sapiens] 74 2e-13
gi|15029506 homeobox D8 [Homo sapiens] 73 2e-13
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 73 3e-13
gi|45593144 gastrulation brain homeo box 2 [Homo sapiens] 73 3e-13
gi|82659115 distal-less homeobox 6 [Homo sapiens] 72 5e-13
gi|157743259 H6 family homeobox 3 [Homo sapiens] 72 5e-13
>gi|14149611 empty spiracles homeobox 2 [Homo sapiens]
Length = 252
Score = 521 bits (1341), Expect = e-148
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 1 MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAG 60
MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAG
Sbjct: 1 MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAG 60
Query: 61 RGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFY 120
RGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFY
Sbjct: 61 RGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFY 120
Query: 121 PWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVV 180
PWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVV
Sbjct: 121 PWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVV 180
Query: 181 GAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQ 240
GAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQ
Sbjct: 181 GAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQ 240
Query: 241 ASPEEIDVTSDD 252
ASPEEIDVTSDD
Sbjct: 241 ASPEEIDVTSDD 252
>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
Length = 290
Score = 312 bits (799), Expect = 2e-85
Identities = 168/267 (62%), Positives = 195/267 (73%), Gaps = 25/267 (9%)
Query: 1 MFQPAPKRCFTIESLVAKDSP--------------LPASRSEDPIRPAALSYANSSPINP 46
MFQPA KR FTIESLVAKD L A+ SE+P+RP AL+Y + S
Sbjct: 34 MFQPAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEA 93
Query: 47 -FLNGFHSAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSP 105
F++GF +AAAA AGR +Y P+LVF EA++HP A+ VHP H L A PL P
Sbjct: 94 AFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHP---ALTVHPA---HQLGASPL---QPP 144
Query: 106 HPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQ 165
H F +Q RDP FYPW++ R R+ GHRFQ +D + LLH ARKPKRIRTAFSPSQ
Sbjct: 145 HSFFGAQHRDPLHFYPWVL-RNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAFSPSQ 203
Query: 166 LLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKK 225
LLRLE AFEKNHYVVGAERKQLA SLSL+ETQVKVWFQNRRTK+KRQKLEEEG +S+QKK
Sbjct: 204 LLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKK 263
Query: 226 KGTHHINRWRIATKQASPEEIDVTSDD 252
KG+HHINRWRIATKQA+ E+IDVTS+D
Sbjct: 264 KGSHHINRWRIATKQANGEDIDVTSND 290
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 84.3 bits (207), Expect = 9e-17
Identities = 58/177 (32%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 50 GFHSAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLF 109
G A A + GV P +H P HP P A LP+ S P
Sbjct: 118 GSSGGAGALSAAGVIRVP--------AHRPLAGAVAHPQP-----LATGLPTVPSV-PAM 163
Query: 110 ASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRL 169
+PW+ RY RF G+ N K K+ RT+F+ Q+ L
Sbjct: 164 PGVNNLTGLTFPWMESNRRYTKDRFTGHP-------YQNRTPPKKKKPRTSFTRLQICEL 216
Query: 170 EHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKK 226
E F + Y+ AER LA +L +T+ QVK WFQNRRTK++RQ EE ++ QQ +
Sbjct: 217 EKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANR 273
>gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]
Length = 291
Score = 83.2 bits (204), Expect = 2e-16
Identities = 62/204 (30%), Positives = 86/204 (42%), Gaps = 7/204 (3%)
Query: 30 PIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVP 89
P P SY P + S A+ AG G ++ +S P + V
Sbjct: 35 PRGPDGASYLGGPPGGRPGATYPSLPASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHR 94
Query: 90 PPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQG-------NDTSPE 142
P PLPS+ P + +PW+ R++ RF T
Sbjct: 95 PLPGAVPPPLPSALPAMPSVPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRI 154
Query: 143 SFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWF 202
N K K+ RT+FS Q+ LE F + Y+ AER LA SL +T+ QVK WF
Sbjct: 155 GHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWF 214
Query: 203 QNRRTKFKRQKLEEEGSDSQQKKK 226
QNRRTK++RQ EE ++ QQ +
Sbjct: 215 QNRRTKWRRQTAEEREAERQQASR 238
>gi|7110735 ventral anterior homeobox 2 [Homo sapiens]
Length = 290
Score = 82.4 bits (202), Expect = 3e-16
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
+PKR RT+F+ QL RLE F++ YVVG ER +LA L+L+ETQVKVWFQNRRTK K+
Sbjct: 101 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 160
Query: 213 K---LEEEGSDSQQKKKGTHHINR 233
+ LE+ S S + T +I R
Sbjct: 161 QSRDLEKRASSSASEAFATSNILR 184
>gi|23397672 homeobox D4 [Homo sapiens]
Length = 255
Score = 81.6 bits (200), Expect = 6e-16
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 79 PNPAVPVHPVPPPHAL-AAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGN 137
P P P PPP L A S P + + P+ YPW+ + N
Sbjct: 92 PGEPCPAPPAPPPAPLPGARAYSQSDPKQPPSGTALKQPAVVYPWM--------KKVHVN 143
Query: 138 DTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQ 197
+P N +PKR RTA++ Q+L LE F N Y+ R ++AH+L L+E Q
Sbjct: 144 SVNP------NYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
Query: 198 VKVWFQNRRTKFKR 211
+K+WFQNRR K+K+
Sbjct: 198 IKIWFQNRRMKWKK 211
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 81.6 bits (200), Expect = 6e-16
Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 20/250 (8%)
Query: 12 IESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVYSNPDLVF 71
I ++++ S AS + P + S ++SS + +AAAAAA S+P +
Sbjct: 98 INDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLL 157
Query: 72 AE----AVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRY 127
A + PP P ++ P A+AA P PL R P F+P ++
Sbjct: 158 AGLPRFSSLSPPPPPPGLYFSPSAAAVAA----VGRYPKPLAELPGRTP-IFWPGVMQSP 212
Query: 128 RYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQL 187
+ R L + K K R FS Q+ LE FE+ Y+ G ER +L
Sbjct: 213 PWRDARLACTPHQGSILLDKDG---KRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARL 269
Query: 188 AHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPEE-- 245
A+SL +TE+QVKVWFQNRRTK++++ E + KKK R + A++ ++
Sbjct: 270 AYSLGMTESQVKVWFQNRRTKWRKKHAAEMAT---AKKKQDSETERLKGASENEEEDDDY 326
Query: 246 ---IDVTSDD 252
+D SDD
Sbjct: 327 NKPLDPNSDD 336
>gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]
Length = 334
Score = 80.5 bits (197), Expect = 1e-15
Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
+PKR RT+F+ QL RLE F++ YVVG ER +LA L+L+ETQVKVWFQNRRTK K+
Sbjct: 99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK- 157
Query: 213 KLEEEGSDSQ 222
++G DS+
Sbjct: 158 ---DQGKDSE 164
>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
Length = 284
Score = 79.7 bits (195), Expect = 2e-15
Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 83 VPVH---PVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQG--- 136
VP H PVPPP A P+ P L + TF PW+ R+ R
Sbjct: 83 VPAHRPLPVPPP----AGGAPAVPGPSGLGGAGGLAGLTF-PWMDSGRRFAKDRLTAALS 137
Query: 137 --NDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLT 194
+ T N K K+ RT+FS SQ+L LE F + Y+ AER LA +L +T
Sbjct: 138 PFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMT 197
Query: 195 ETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINR 233
+ QVK WFQNRRTK++RQ EE ++ + + H+ +
Sbjct: 198 DAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQ 236
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 79.0 bits (193), Expect = 4e-15
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 150 LARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKF 209
L K +R RTAF+ QLL LEH F+ N Y+ +R ++A SL LTETQVK+WFQNRR K+
Sbjct: 237 LLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKW 296
Query: 210 KR-QKLEEEGSDSQQKKKG 227
KR +K +E+ + +K+KG
Sbjct: 297 KRSKKAKEQAAQEAEKQKG 315
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 76.6 bits (187), Expect = 2e-14
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
KP+R RTAF+ QL+ LE+ F Y+ ER LA SLSLTETQVK+WFQNRRTK+K+Q
Sbjct: 162 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 221
Query: 213 KLEEEGS 219
+G+
Sbjct: 222 NPGADGA 228
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.6 bits (187), Expect = 2e-14
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
KP+R RTAF+ QL+ LE+ F Y+ ER LA SLSLTETQVK+WFQNRRTK+K+Q
Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243
Query: 213 KLEEEGS 219
+G+
Sbjct: 244 NPGADGA 250
>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.6 bits (187), Expect = 2e-14
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
KP+R RTAF+ QL+ LE+ F Y+ ER LA SLSLTETQVK+WFQNRRTK+K+Q
Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243
Query: 213 KLEEEGS 219
+G+
Sbjct: 244 NPGADGA 250
>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.6 bits (187), Expect = 2e-14
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
KP+R RTAF+ QL+ LE+ F Y+ ER LA SLSLTETQVK+WFQNRRTK+K+Q
Sbjct: 184 KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 243
Query: 213 KLEEEGS 219
+G+
Sbjct: 244 NPGADGA 250
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 76.3 bits (186), Expect = 2e-14
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 79 PNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQ---RDPST---FYPWLIHRYRYLGH 132
P P P PPP + A+ P +S++P P A++ P+ +PW+ R
Sbjct: 109 PQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWM-KESRQNTK 167
Query: 133 RFQGNDTSPESFLLHNALARKP--KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHS 190
+ + +S ES + + KR RTA++ +QL+ LE F N Y+ R ++A+
Sbjct: 168 QKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANL 227
Query: 191 LSLTETQVKVWFQNRRTKFKRQK 213
L+LTE Q+K+WFQNRR K+K+ +
Sbjct: 228 LNLTERQIKIWFQNRRMKYKKDQ 250
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 76.3 bits (186), Expect = 2e-14
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 79 PNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQ---RDPST---FYPWLIHRYRYLGH 132
P P P PPP + A+ P +S++P P A++ P+ +PW+ R
Sbjct: 109 PQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWM-KESRQNTK 167
Query: 133 RFQGNDTSPESFLLHNALARKP--KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHS 190
+ + +S ES + + KR RTA++ +QL+ LE F N Y+ R ++A+
Sbjct: 168 QKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANL 227
Query: 191 LSLTETQVKVWFQNRRTKFKRQK 213
L+LTE Q+K+WFQNRR K+K+ +
Sbjct: 228 LNLTERQIKIWFQNRRMKYKKDQ 250
>gi|28912912 NK6 transcription factor related, locus 2 [Homo
sapiens]
Length = 277
Score = 76.3 bits (186), Expect = 2e-14
Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 105 PHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPS 164
P PL R P F+P ++ + R G +P +L K K R FS
Sbjct: 104 PKPLAELPGRPP-IFWPGVVQGAPWRDPRLAG--PAPAGGVLDKD--GKKKHSRPTFSGQ 158
Query: 165 QLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQK 224
Q+ LE FE+ Y+ G ER +LA+SL +TE+QVKVWFQNRRTK++++ E S K
Sbjct: 159 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMAS---AK 215
Query: 225 KKGTHHINRWRIATKQASPEE-----IDVTSDD 252
KK + ++ A ++ +D SDD
Sbjct: 216 KKQDSDAEKLKVGGSDAEDDDEYNRPLDPNSDD 248
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 75.9 bits (185), Expect = 3e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
KP+R RTAF+ QL+ LE+ F+ Y+ ER LA SLSLTETQVK+WFQNRRTK+K+Q
Sbjct: 661 KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 720
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 75.9 bits (185), Expect = 3e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
KP+R RTAF+ QL+ LE+ F+ Y+ ER LA SLSLTETQVK+WFQNRRTK+K+Q
Sbjct: 96 KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 155
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 75.9 bits (185), Expect = 3e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
KP+R RTAF+ QL+ LE+ F+ Y+ ER LA SLSLTETQVK+WFQNRRTK+K+Q
Sbjct: 258 KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 317
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 75.5 bits (184), Expect = 4e-14
Identities = 51/160 (31%), Positives = 68/160 (42%), Gaps = 40/160 (25%)
Query: 78 PPNPAVPVHPVPPPHALAAHPLP-----------------SSHSPHPLFASQQRDPS--- 117
PP P P P PPP P P SS P P A PS
Sbjct: 74 PPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSPSH 133
Query: 118 ------TFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEH 171
YPW+ + + +P N +PKR RTA++ Q+L LE
Sbjct: 134 SACKEPVVYPWM--------RKVHVSTVNP------NYAGGEPKRSRTAYTRQQVLELEK 179
Query: 172 AFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 211
F N Y+ R ++AH+L L+E Q+K+WFQNRR K+K+
Sbjct: 180 EFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 219
>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
Length = 327
Score = 75.1 bits (183), Expect = 5e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Query: 152 RKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 211
+KP++ RTAF+ QL +LE +FE+ Y+ +R +LA SL+LT+TQVK W+QNRRTK+KR
Sbjct: 176 KKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKR 235
Query: 212 Q 212
Q
Sbjct: 236 Q 236
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 75.1 bits (183), Expect = 5e-14
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 151 ARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFK 210
A+KP++ RTAFS QL +LE +FE+ Y+ +R LA +L+LT+TQVK W+QNRRTK+K
Sbjct: 229 AKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 288
Query: 211 RQ 212
RQ
Sbjct: 289 RQ 290
>gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]
Length = 363
Score = 73.6 bits (179), Expect = 2e-13
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
K +R RTAF+ QLL LE F Y+ ER Q+AH+L L+E QVK+WFQNRR K+KR
Sbjct: 260 KSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRI 319
Query: 213 KLEEEGSDSQQKKKGTH-------HINRWRIATKQASPEE 245
K S S + + H+NR+ + ++ E+
Sbjct: 320 KAGNVSSRSGEPVRNPKIVVPIPVHVNRFAVRSQHQQMEQ 359
>gi|4504469 homeobox B5 [Homo sapiens]
Length = 269
Score = 73.6 bits (179), Expect = 2e-13
Identities = 59/196 (30%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 23 PASRSEDPIRPAALSYANSSPIN-PFLNG-FHSAAAAAAG-----RGVYSNPDLVFAEAV 75
PA E R AA S + SSP + P NG H A +A+ S+ + +
Sbjct: 77 PAPAQEPRFRQAASSCSLSSPESLPCTNGDSHGAKPSASSPSDQATSASSSANFTEIDEA 136
Query: 76 SHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQ 135
S P + P A P P + S A+ + +PW+ R ++ H
Sbjct: 137 SASSEPEEAASQLSSPSLARAQPEPMATST----AAPEGQTPQIFPWM--RKLHISHDMT 190
Query: 136 GNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTE 195
G D KR RTA++ Q L LE F N Y+ R ++AH+L L+E
Sbjct: 191 GPDG---------------KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 235
Query: 196 TQVKVWFQNRRTKFKR 211
Q+K+WFQNRR K+K+
Sbjct: 236 RQIKIWFQNRRMKWKK 251
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 73.2 bits (178), Expect = 2e-13
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 66 NPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPH------PLFASQQRDPSTF 119
+P + A PP+P P P PP +A H P+ + P+F +QQ
Sbjct: 100 SPAAAYQAAPPPPPHPPPPPPP-PPCGGIACHGEPAKFYGYDNLQRQPIFTTQQEAELVQ 158
Query: 120 YPWLIHRYRYLG----HRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEK 175
YP +G H Q + S + A +R R +S Q L LE F
Sbjct: 159 YPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLF 218
Query: 176 NHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKK 226
N Y+ R +++H+L+LTE QVK+WFQNRR K+K++ +++ S+Q+ K
Sbjct: 219 NPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNKDKFPVSRQEVK 269
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 72.8 bits (177), Expect = 3e-13
Identities = 36/64 (56%), Positives = 44/64 (68%)
Query: 153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 212
+ K+ RT FS SQ+ +LE F+ Y+ AER LA SL LTETQVK+WFQNRR K+KRQ
Sbjct: 202 RKKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQ 261
Query: 213 KLEE 216
E
Sbjct: 262 LAAE 265
>gi|45593144 gastrulation brain homeo box 2 [Homo sapiens]
Length = 348
Score = 72.8 bits (177), Expect = 3e-13
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 125 HRYRYLGHRFQGNDTSPESFLLHNALAR-KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAE 183
H+ GH + +T P S + + K +R RTAF+ QLL LE F Y+ E
Sbjct: 219 HKEEDPGHALE--ETPPSSGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTE 276
Query: 184 RKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTH-------HINRWRI 236
R Q+AH+L L+E QVK+WFQNRR K+KR K S + + + H++R+ I
Sbjct: 277 RSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNANSKTGEPSRNPKIVVPIPVHVSRFAI 336
Query: 237 ATKQASPEE 245
++ E+
Sbjct: 337 RSQHQQLEQ 345
>gi|82659115 distal-less homeobox 6 [Homo sapiens]
Length = 265
Score = 72.0 bits (175), Expect = 5e-13
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 28/184 (15%)
Query: 48 LNGFHSAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPH-ALAAHPLPSSHSPH 106
L+ HSAAAAAA + + H +P H +LAA+P SHS H
Sbjct: 43 LHCLHSAAAAAAAGSHHHHH-----HQHHHHGSPYASGGGNSYNHRSLAAYPY-MSHSQH 96
Query: 107 PLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLL-------HNALARKPKRIRT 159
+ + S + +G+DT + + N +K ++ RT
Sbjct: 97 SPYLQSYHNSSA------------AAQTRGDDTDQQKTTVIENGEIRFNGKGKKIRKPRT 144
Query: 160 AFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGS 219
+S QL L H F++ Y+ ER +LA SL LT+TQVK+WFQN+R+KFK KL ++GS
Sbjct: 145 IYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFK--KLLKQGS 202
Query: 220 DSQQ 223
+ +
Sbjct: 203 NPHE 206
Score = 28.1 bits (61), Expect = 7.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 34 AALSYANSSPINPFLNGFHSAAAAAAGRG 62
AA Y + S +P+L +H+++AAA RG
Sbjct: 86 AAYPYMSHSQHSPYLQSYHNSSAAAQTRG 114
>gi|157743259 H6 family homeobox 3 [Homo sapiens]
Length = 357
Score = 72.0 bits (175), Expect = 5e-13
Identities = 36/66 (54%), Positives = 45/66 (68%)
Query: 151 ARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFK 210
A + K+ RT FS SQ+ +LE F+ Y+ +ER LA SL LTETQVK+WFQNRR K+K
Sbjct: 224 ACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK 283
Query: 211 RQKLEE 216
RQ E
Sbjct: 284 RQLAAE 289
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,809,966
Number of Sequences: 37866
Number of extensions: 671282
Number of successful extensions: 5663
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 4342
Number of HSP's gapped (non-prelim): 1403
length of query: 252
length of database: 18,247,518
effective HSP length: 100
effective length of query: 152
effective length of database: 14,460,918
effective search space: 2198059536
effective search space used: 2198059536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.