Guide to the Human Genome
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Name: CYorf15A Sequence: fasta or formatted (131aa) NCBI GI: 140970633
Description:

hypothetical protein LOC246126

Referenced in:

Gene Families
ER, Golgi, and the Secretory Pathway
Y-linked Genes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9          9           2
 C cysteine            4.6          6           1
 D aspartate           4.6          6           1
 E glutamate          11.5         15           2
 F phenylalanine       0.8          1           1
 G glycine             4.6          6           1
 H histidine           3.1          4           1
 I isoleucine          1.5          2           1
 K lysine              6.9          9           2
 L leucine            14.5         19           3
 M methionine          2.3          3           1
 N asparagine          6.1          8           1
 P proline             4.6          6           2
 Q glutamine           6.1          8           2
 R arginine            4.6          6           2
 S serine              8.4         11           1
 T threonine           3.8          5           1
 V valine              3.8          5           1
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC246126 
CXorf15               0.708   gamma-taxilin 
TXLNA                 0.152   taxilin 
TXLNB                 0.086   taxilin beta 
CTTNBP2               0.025   cortactin binding protein 2 
ARHGEF11              0.021   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.021   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
SCN9A                 0.021   sodium channel, voltage-gated, type IX, alpha 
FILIP1L               0.012   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.012   filamin A interacting protein 1-like isoform 2 [Hom...
FILIP1L               0.012   filamin A interacting protein 1-like isoform 1 [Hom...
TTC23L                0.012   tetratricopeptide repeat domain 23-like 
FILIP1                0.012   filamin A interacting protein 1 
PAK3                  0.008   p21-activated kinase 3 isoform d 
PAK3                  0.008   p21-activated kinase 3 isoform c 
PAK3                  0.008   p21-activated kinase 3 isoform b 
PAK3                  0.008   p21-activated kinase 3 isoform a 
PAK3                  0.008   p21-activated kinase 3 isoform a 
PAK3                  0.008   p21-activated kinase 3 isoform a 
NFATC4                0.008   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.008   nuclear factor of activated T-cells, cytoplasmic, ca...
RRP8                  0.008   ribosomal RNA processing 8, methyltransferase, homol...
DCLRE1A               0.008   DNA cross-link repair 1A 
CAD                   0.008   carbamoylphosphate synthetase 2/aspartate transcarba...
FBXO11                0.008   F-box only protein 11 isoform 1 
FBXO11                0.008   F-box only protein 11 isoform 2 
FBXO11                0.008   F-box only protein 11 isoform 3 
LOC100291039          0.008   PREDICTED: hypothetical protein XP_002346552 
LOC100288588          0.008   PREDICTED: hypothetical protein XP_002342388 
DACT1                 0.008   dapper 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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