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Search of human proteins with 8922871
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens]
(318 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens] 661 0.0
gi|89257335 oleoyl-ACP hydrolase isoform 2 [Homo sapiens] 526 e-149
gi|62243734 signal transducing adaptor family member 2 isoform 1... 39 0.006
gi|29029530 sulfotransferase family, cytosolic, 1C, member 1 iso... 39 0.008
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 37 0.023
gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo sapi... 37 0.023
gi|224494572 hypothetical protein LOC401082 [Homo sapiens] 37 0.030
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 36 0.040
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 36 0.052
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 36 0.052
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 35 0.067
gi|119964690 glycogenin 2 isoform b [Homo sapiens] 35 0.067
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens] 35 0.088
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 35 0.11
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 35 0.11
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 34 0.15
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi... 34 0.15
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 33 0.26
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 33 0.26
gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens] 33 0.44
gi|226371669 discs large homolog 7 isoform b [Homo sapiens] 33 0.44
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 32 0.57
gi|41872631 fatty acid synthase [Homo sapiens] 32 0.75
gi|61744479 solute carrier family 3, member 2 isoform d [Homo sa... 32 0.97
gi|61744477 solute carrier family 3, member 2 isoform b [Homo sa... 32 0.97
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 31 1.3
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 31 1.3
>gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens]
Length = 318
Score = 661 bits (1706), Expect = 0.0
Identities = 318/318 (100%), Positives = 318/318 (100%)
Query: 1 MERGDQPKRTRNENIFNCLYKNPEATFKLICFPWMGGGSTHFAKWGQDTHDLLEETASHH 60
MERGDQPKRTRNENIFNCLYKNPEATFKLICFPWMGGGSTHFAKWGQDTHDLLEETASHH
Sbjct: 1 MERGDQPKRTRNENIFNCLYKNPEATFKLICFPWMGGGSTHFAKWGQDTHDLLEETASHH 60
Query: 61 VAKAGLKLRRSSDPPASAYPCAGVSHRRREPPCLAKILGLFWILIFFMHSLRLPGRESRV 120
VAKAGLKLRRSSDPPASAYPCAGVSHRRREPPCLAKILGLFWILIFFMHSLRLPGRESRV
Sbjct: 61 VAKAGLKLRRSSDPPASAYPCAGVSHRRREPPCLAKILGLFWILIFFMHSLRLPGRESRV 120
Query: 121 EEPLENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFL 180
EEPLENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFL
Sbjct: 121 EEPLENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFL 180
Query: 181 SSATPVHSKAWHRIPKDDELSEEQISHYLMEFGGTPKHFAEAKEFVKQCSPIIRADLNIV 240
SSATPVHSKAWHRIPKDDELSEEQISHYLMEFGGTPKHFAEAKEFVKQCSPIIRADLNIV
Sbjct: 181 SSATPVHSKAWHRIPKDDELSEEQISHYLMEFGGTPKHFAEAKEFVKQCSPIIRADLNIV 240
Query: 241 RSCTSNVPSKAVLSCDLTCFVGSEDIAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANEK 300
RSCTSNVPSKAVLSCDLTCFVGSEDIAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANEK
Sbjct: 241 RSCTSNVPSKAVLSCDLTCFVGSEDIAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANEK 300
Query: 301 LIKNYIIKCLEVSSISNF 318
LIKNYIIKCLEVSSISNF
Sbjct: 301 LIKNYIIKCLEVSSISNF 318
>gi|89257335 oleoyl-ACP hydrolase isoform 2 [Homo sapiens]
Length = 265
Score = 526 bits (1354), Expect = e-149
Identities = 264/318 (83%), Positives = 265/318 (83%), Gaps = 53/318 (16%)
Query: 1 MERGDQPKRTRNENIFNCLYKNPEATFKLICFPWMGGGSTHFAKWGQDTHDLLEETASHH 60
MERGDQPKRTRNENIFNCLYKNPEATFKLICFPWMGGGSTHFAKWGQDTHDLLE
Sbjct: 1 MERGDQPKRTRNENIFNCLYKNPEATFKLICFPWMGGGSTHFAKWGQDTHDLLE------ 54
Query: 61 VAKAGLKLRRSSDPPASAYPCAGVSHRRREPPCLAKILGLFWILIFFMHSLRLPGRESRV 120
+HSLRLPGRESRV
Sbjct: 55 -----------------------------------------------VHSLRLPGRESRV 67
Query: 121 EEPLENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFL 180
EEPLENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFL
Sbjct: 68 EEPLENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLHLFL 127
Query: 181 SSATPVHSKAWHRIPKDDELSEEQISHYLMEFGGTPKHFAEAKEFVKQCSPIIRADLNIV 240
SSATPVHSKAWHRIPKDDELSEEQISHYLMEFGGTPKHFAEAKEFVKQCSPIIRADLNIV
Sbjct: 128 SSATPVHSKAWHRIPKDDELSEEQISHYLMEFGGTPKHFAEAKEFVKQCSPIIRADLNIV 187
Query: 241 RSCTSNVPSKAVLSCDLTCFVGSEDIAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANEK 300
RSCTSNVPSKAVLSCDLTCFVGSEDIAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANEK
Sbjct: 188 RSCTSNVPSKAVLSCDLTCFVGSEDIAKDMEAWKDVTSGNAKIYQLPGGHFYLLDPANEK 247
Query: 301 LIKNYIIKCLEVSSISNF 318
LIKNYIIKCLEVSSISNF
Sbjct: 248 LIKNYIIKCLEVSSISNF 265
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 38.9 bits (89), Expect = 0.006
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 55 ETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
E HHVA+AGL+L SSDPP SA AG++
Sbjct: 359 EKGFHHVAQAGLELLTSSDPPTSASQSAGIT 389
>gi|29029530 sulfotransferase family, cytosolic, 1C, member 1
isoform b [Homo sapiens]
Length = 307
Score = 38.5 bits (88), Expect = 0.008
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 42 FAKWGQDTHDLLEETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
F +W + ET HHVA+AGLKL SS+PPAS A ++
Sbjct: 82 FIEWARPPQP--SETGFHHVAQAGLKLLSSSNPPASTSQSAKIT 123
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 37.0 bits (84), Expect = 0.023
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 55 ETASHHVAKAGLKLRRSSDPPASAYPCAGVSHRRREP 91
ET S HV ++ L+L SSDPPASA AG+ R P
Sbjct: 107 ETESGHVTQSDLELLLSSDPPASASQSAGIRGVRHHP 143
>gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo
sapiens]
Length = 276
Score = 37.0 bits (84), Expect = 0.023
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 58 SHHVAKAGLKLRRSSDPPASAYPCAGVSHRRREP 91
S H+A+ GLK+ S DPPASA+ AG++ R P
Sbjct: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITGVSRCP 190
>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
Length = 95
Score = 36.6 bits (83), Expect = 0.030
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 12/50 (24%)
Query: 36 GGGSTHFAKWGQDTHDLLEETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
GGG H E SH+VA+AGL+L SS+ P SAY AG +
Sbjct: 7 GGGCEHL------------EDGSHYVAQAGLELLGSSNSPTSAYQAAGTT 44
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 36.2 bits (82), Expect = 0.040
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 55 ETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
E SH+ A+AGL+L SS+PPASA AG++
Sbjct: 30 EMGSHYFAQAGLELLGSSNPPASASQSAGIT 60
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 35.8 bits (81), Expect = 0.052
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 52 LLEETASHHVAKAGLKLRRSSDPPASAYPCA---GVSHRRREPPCLAKI 97
+L ET HV +AGL+L S DPP SA A GVSH R C+ ++
Sbjct: 352 VLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVLCVLRL 400
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 35.8 bits (81), Expect = 0.052
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 52 LLEETASHHVAKAGLKLRRSSDPPASAYPCA---GVSHRRREPPCLAKI 97
+L ET HV +AGL+L S DPP SA A GVSH R C+ ++
Sbjct: 352 VLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVLCVLRL 400
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 35.4 bits (80), Expect = 0.067
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 52 LLEETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
+L++T S ++A+AGL+L SSD PASA AG++
Sbjct: 119 VLDKTGSCYIAQAGLELLASSDLPASASQSAGIT 152
>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
Length = 501
Score = 35.4 bits (80), Expect = 0.067
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 53 LEETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
+ ET HH A+AGL+L RSS+ P SA AG++
Sbjct: 1 MSETEFHHGAQAGLELLRSSNSPTSASQSAGMT 33
>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
Length = 176
Score = 35.0 bits (79), Expect = 0.088
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 59 HHVAKAGLKLRRSSDPPASAYPCAGV---SHRRREPP 92
H+VA+A L+L SS+PPASA G+ SHR R P
Sbjct: 4 HYVAQADLELLTSSNPPASASQSTGITGGSHRARPGP 40
>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 59 HHVAKAGLKLRRSSDPPASAYPCA---GVSHR 87
+HV +AGL+L SSDPP SA A GVSHR
Sbjct: 4 YHVGQAGLELLTSSDPPTSASQNAEITGVSHR 35
>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 59 HHVAKAGLKLRRSSDPPASAYPCA---GVSHR 87
+HV +AGL+L SSDPP SA A GVSHR
Sbjct: 4 YHVGQAGLELLTSSDPPTSASQNAEITGVSHR 35
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 34.7 bits (78), Expect = 0.11
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 52 LLEETASHHVAKAGLKLRRSSDPPASAYPCA---GVSHRRREPPCLAKI 97
+L ET HV +AGL+L S DPP SA A GV+H R C+ ++
Sbjct: 352 VLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVLCVLRL 400
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 34.7 bits (78), Expect = 0.11
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 52 LLEETASHHVAKAGLKLRRSSDPPASAYPCA---GVSHRRREPPCLAKI 97
+L ET HV +AGL+L S DPP SA A GV+H R C+ ++
Sbjct: 352 VLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVLCVLRL 400
>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 59 HHVAKAGLKLRRSSDPPASAYPCA---GVSHR 87
+HV +AGL+L SSDPP SA A GVSHR
Sbjct: 4 YHVGQAGLELLTSSDPPTSASQNAEITGVSHR 35
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 51 DLLEETASHHVAKAGLKLRRSSDPPASAYPCAGVS---HRRR 89
D +ET S +VA+AGL+ S DP ASA AG++ HR R
Sbjct: 38 DPRKETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTR 79
>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
sapiens]
Length = 440
Score = 34.3 bits (77), Expect = 0.15
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 53 LEETASHHVAKAGLKLRRSSDPPASAYPCAGV 84
L ET HHVA AGL+L S DPP S G+
Sbjct: 409 LVETGFHHVAHAGLELLISRDPPTSGSQSVGL 440
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 33.5 bits (75), Expect = 0.26
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 53 LEETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
L E HHV +AGL+L SSD P SA AG++
Sbjct: 36 LVEMGFHHVGQAGLELLISSDLPTSASQSAGIT 68
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 33.5 bits (75), Expect = 0.26
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 55 ETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
ET H V +AGL+L SSDPPA AG++
Sbjct: 111 ETGFHRVGQAGLQLLTSSDPPALDSQSAGIT 141
>gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]
Length = 558
Score = 32.7 bits (73), Expect = 0.44
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 53 LEETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
L ET HHV++AGL+L S D P A AG++
Sbjct: 235 LLETVFHHVSQAGLELLTSGDLPTLASQSAGIT 267
>gi|226371669 discs large homolog 7 isoform b [Homo sapiens]
Length = 842
Score = 32.7 bits (73), Expect = 0.44
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 52 LLEETASHHVAKAGLKLRRSSDPPASAYPCAGVSHRRR 89
LL+ S +VA+AGL++ SSDP SA AG + R +
Sbjct: 803 LLDSVGSCYVARAGLEVLGSSDPTTSASRVAGTTARSK 840
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 32.3 bits (72), Expect = 0.57
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 215 TPKHFAEAKEFVKQCSPIIRADLNIVRSCTSNVPSKAVLSCDLTCFVGSEDIAKDMEA 272
+PK + +AK + K SP + + S +SN+ S TC S D DMEA
Sbjct: 669 SPKGYDDAKRYCKDPSPSSSSTSSYAPSSSSNLSCGGGSSASSTCSKSSFDYTHDMEA 726
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 32.0 bits (71), Expect = 0.75
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 123 PLENDISQLVDEVVCALQPVIQDKPFAFFGHSMGSYIAFRTALGLKENNQPEPLH--LFL 180
PL++ I L + ++ V + P+ G+S G+ +AF L+ P P H LFL
Sbjct: 2278 PLDS-IHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFL 2336
Query: 181 SSATPVHSKAW 191
+P + A+
Sbjct: 2337 FDGSPTYVLAY 2347
>gi|61744479 solute carrier family 3, member 2 isoform d [Homo
sapiens]
Length = 599
Score = 31.6 bits (70), Expect = 0.97
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 23 PEATFKLICFP-WMGGGSTHFAKWGQDTHDLLEETASHHVAKAGLKLRRSSDPPASAYPC 81
PEA+ ++ P + G + G D ET S V +AGL+L SSDPPA A
Sbjct: 6 PEASIAVVSIPRQLPGSHSEAGVQGLSAGDD-SETGSDCVTQAGLQLLASSDPPALASKN 64
Query: 82 AGVS 85
A V+
Sbjct: 65 AEVT 68
>gi|61744477 solute carrier family 3, member 2 isoform b [Homo
sapiens]
Length = 631
Score = 31.6 bits (70), Expect = 0.97
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 23 PEATFKLICFP-WMGGGSTHFAKWGQDTHDLLEETASHHVAKAGLKLRRSSDPPASAYPC 81
PEA+ ++ P + G + G D ET S V +AGL+L SSDPPA A
Sbjct: 6 PEASIAVVSIPRQLPGSHSEAGVQGLSAGDD-SETGSDCVTQAGLQLLASSDPPALASKN 64
Query: 82 AGVS 85
A V+
Sbjct: 65 AEVT 68
Score = 30.8 bits (68), Expect = 1.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 55 ETASHHVAKAGLKLRRSSDPPASAYPCAGVS 85
ET HHV++A ++ S DP ASA AG++
Sbjct: 70 ETGFHHVSQADIEFLTSIDPTASASGSAGIT 100
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 47 QDTHDLLEETASHHVAKAGLKLRRSSDPPASAYPCAGVS--HRRREP 91
Q+ D E HH +A L+L SSD PASA AG++ + R +P
Sbjct: 68 QEAADGHPEMGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQP 114
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 47 QDTHDLLEETASHHVAKAGLKLRRSSDPPASAYPCAGVS--HRRREP 91
Q+ D E HH +A L+L SSD PASA AG++ + R +P
Sbjct: 68 QEAADGHPEMGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQP 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,722,357
Number of Sequences: 37866
Number of extensions: 636226
Number of successful extensions: 1276
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1230
Number of HSP's gapped (non-prelim): 50
length of query: 318
length of database: 18,247,518
effective HSP length: 102
effective length of query: 216
effective length of database: 14,385,186
effective search space: 3107200176
effective search space used: 3107200176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.