Guide to the Human Genome
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Name: FAM18B2 Sequence: fasta or formatted (276aa) NCBI GI: 205277366
Description:

hypothetical protein LOC201158 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [203aa] hypothetical protein LOC201158 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         21           2
 C cysteine            2.5          7           1
 D aspartate           4.0         11           2
 E glutamate           4.7         13           3
 F phenylalanine       6.5         18           2
 G glycine             6.2         17           3
 H histidine           3.3          9           1
 I isoleucine          5.1         14           2
 K lysine              4.0         11           1
 L leucine             9.8         27           3
 M methionine          1.8          5           1
 N asparagine          2.9          8           1
 P proline             5.4         15           2
 Q glutamine           2.9          8           2
 R arginine            8.0         22           2
 S serine             10.9         30           3
 T threonine           4.7         13           2
 V valine              5.8         16           1
 W tryptophan          3.6         10           2
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC201158 isoform 1 
FAM18B2               0.534   hypothetical protein LOC201158 isoform 2 
FAM18B                0.514   hypothetical protein LOC51030 
FAM18A                0.318   hypothetical protein LOC780776 
C14orf178             0.044   hypothetical protein LOC283579 
STAP2                 0.037   signal transducing adaptor family member 2 isoform 1...
C15orf40              0.031   hypothetical protein LOC123207 isoform d 
FLJ25363              0.031   hypothetical protein LOC401082 
LOC100128260          0.031   PREDICTED: hCG_1742852 
LOC100128260          0.031   PREDICTED: hCG_1742852 
LOC100288773          0.027   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.027   PREDICTED: hCG_1742852 
ZNF195                0.027   zinc finger protein 195 isoform 2 
ZNF195                0.027   zinc finger protein 195 isoform 1 
CHEK2                 0.027   protein kinase CHK2 isoform c 
LOC100132815          0.026   PREDICTED: hypothetical protein 
LOC100132815          0.026   PREDICTED: hypothetical protein 
LOC100132815          0.026   PREDICTED: hypothetical protein 
C9orf37               0.026   chromosome 9 open reading frame 37 
LOC100294407          0.024   PREDICTED: similar to hCG2039376 
USP19                 0.024   ubiquitin thioesterase 19 
SULT1C2               0.022   sulfotransferase family, cytosolic, 1C, member 1 iso...
OLAH                  0.022   oleoyl-ACP hydrolase isoform 1 
REL                   0.020   v-rel reticuloendotheliosis viral oncogene homolog [H...
CHFR                  0.020   checkpoint with forkhead and ring finger domains is...
CNGA1                 0.018   cyclic nucleotide gated channel alpha 1 isoform 1 [...
NEK4                  0.016   NIMA-related kinase 4 
SUGT1                 0.016   suppressor of G2 allele of SKP1 isoform a 
LOC100287499          0.016   PREDICTED: hypothetical protein 
LOC100287499          0.016   PREDICTED: hypothetical protein XP_002343643 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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