Guide to the Human Genome
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Name: C9orf37 Sequence: fasta or formatted (176aa) NCBI GI: 63999355
Description:

chromosome 9 open reading frame 37

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         19           2
 C cysteine            2.8          5           2
 D aspartate           2.8          5           1
 E glutamate           5.1          9           1
 F phenylalanine       3.4          6           1
 G glycine            12.5         22           2
 H histidine           5.1          9           2
 I isoleucine          1.1          2           1
 K lysine              2.8          5           1
 L leucine             8.0         14           2
 M methionine          0.6          1           1
 N asparagine          2.8          5           1
 P proline            11.4         20           2
 Q glutamine           2.8          5           1
 R arginine            5.7         10           2
 S serine             13.1         23           2
 T threonine           4.5          8           2
 V valine              3.4          6           1
 W tryptophan          0.6          1           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 9 open reading frame 37 
C14orf178             0.104   hypothetical protein LOC283579 
ZNF195                0.101   zinc finger protein 195 isoform 2 
ZNF195                0.093   zinc finger protein 195 isoform 1 
STAP2                 0.087   signal transducing adaptor family member 2 isoform 1...
C15orf40              0.070   hypothetical protein LOC123207 isoform d 
LOC100128260          0.070   PREDICTED: hCG_1742852 
LOC100132815          0.070   PREDICTED: hypothetical protein 
LOC100128260          0.070   PREDICTED: hCG_1742852 
LOC100132815          0.070   PREDICTED: hypothetical protein 
LOC100132815          0.070   PREDICTED: hypothetical protein 
CHEK2                 0.067   protein kinase CHK2 isoform c 
LOC100288773          0.064   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.064   PREDICTED: hCG_1742852 
UTY                   0.064   tetratricopeptide repeat protein isoform 1 
FLJ25363              0.058   hypothetical protein LOC401082 
SULT1C2               0.055   sulfotransferase family, cytosolic, 1C, member 1 iso...
GPR107                0.055   G protein-coupled receptor 107 isoform 1 
SLC3A2                0.052   solute carrier family 3, member 2 isoform b 
SLC3A2                0.052   solute carrier family 3, member 2 isoform a 
SUGT1                 0.052   suppressor of G2 allele of SKP1 isoform a 
USP19                 0.052   ubiquitin thioesterase 19 
GYG2                  0.052   glycogenin 2 isoform b 
LOC100294407          0.049   PREDICTED: similar to hCG2039376 
CNGA1                 0.049   cyclic nucleotide gated channel alpha 1 isoform 1 [...
LOC100128682          0.046   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.046   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.046   PREDICTED: hypothetical protein LOC100128682 
PODXL                 0.046   podocalyxin-like isoform 1 precursor 
REL                   0.041   v-rel reticuloendotheliosis viral oncogene homolog [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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