Guide to the Human Genome
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Name: FAM82A2 Sequence: fasta or formatted (470aa) NCBI GI: 8922532
Description:

family with sequence similarity 82, member A2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         43           2
 C cysteine            1.7          8           1
 D aspartate           6.0         28           1
 E glutamate          11.1         52           3
 F phenylalanine       2.8         13           1
 G glycine             8.3         39           2
 H histidine           1.9          9           1
 I isoleucine          1.5          7           1
 K lysine              4.7         22           2
 L leucine            13.4         63           3
 M methionine          1.5          7           1
 N asparagine          1.7          8           2
 P proline             2.6         12           1
 Q glutamine           4.0         19           2
 R arginine            7.7         36           4
 S serine              9.6         45           3
 T threonine           3.6         17           2
 V valine              5.1         24           1
 W tryptophan          1.5          7           2
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 82, member A2 
FAM82A1               0.202   family with sequence similarity 82, member A1 
FAM82B                0.122   regulator of microtubule dynamics 1 
DAXX                  0.019   death-domain associated protein isoform a 
DAXX                  0.019   death-domain associated protein isoform a 
DAXX                  0.019   death-domain associated protein isoform b 
AP3B2                 0.014   adaptor-related protein complex 3, beta 2 subunit [H...
SLC24A3               0.013   solute carrier family 24 (sodium/potassium/calcium e...
CCDC88B               0.013   coiled-coil domain containing 88 
HTATSF1               0.013   HIV-1 Tat specific factor 1 
HTATSF1               0.013   HIV-1 Tat specific factor 1 
ZSCAN18               0.012   zinc finger and SCAN domain containing 18 isoform 2...
ZSCAN18               0.012   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.012   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.012   zinc finger and SCAN domain containing 18 isoform 1...
AP3B1                 0.011   adaptor-related protein complex 3, beta 1 subunit [H...
HNRNPU                0.011   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.011   heterogeneous nuclear ribonucleoprotein U isoform a ...
SSFA2                 0.011   sperm specific antigen 2 isoform 1 
SSFA2                 0.011   sperm specific antigen 2 isoform 2 
ODF2                  0.011   outer dense fiber of sperm tails 2 isoform 2 
ODF2                  0.011   outer dense fiber of sperm tails 2 isoform 1 
ZCCHC10               0.010   zinc finger, CCHC domain containing 10 
PTMA                  0.010   prothymosin, alpha isoform 2 
HRC                   0.010   histidine rich calcium binding protein precursor [Hom...
TRIM44                0.009   DIPB protein 
UBTF                  0.009   upstream binding transcription factor, RNA polymera...
UBTF                  0.009   upstream binding transcription factor, RNA polymera...
UBTF                  0.009   upstream binding transcription factor, RNA polymerase...
MYH15                 0.009   myosin, heavy polypeptide 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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