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Search of human proteins with 8922532
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922532 family with sequence similarity 82, member A2 [Homo
sapiens]
(470 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922532 family with sequence similarity 82, member A2 [Homo s... 930 0.0
gi|21389491 family with sequence similarity 82, member A1 [Homo ... 208 1e-53
gi|116875831 regulator of microtubule dynamics 1 [Homo sapiens] 135 6e-32
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 42 0.001
gi|215422388 death-domain associated protein isoform a [Homo sap... 42 0.001
gi|215422366 death-domain associated protein isoform b [Homo sap... 42 0.001
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 38 0.023
gi|31563526 solute carrier family 24 (sodium/potassium/calcium e... 37 0.039
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 37 0.039
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 37 0.050
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 37 0.050
gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 36 0.066
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 36 0.066
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 36 0.066
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 36 0.066
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 35 0.11
gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b ... 35 0.11
gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a ... 35 0.11
gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens] 35 0.19
gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens] 35 0.19
gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo s... 35 0.19
gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo s... 35 0.19
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 34 0.25
gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens] 34 0.33
gi|4504487 histidine rich calcium binding protein precursor [Hom... 34 0.33
gi|21361639 DIPB protein [Homo sapiens] 33 0.56
gi|115529449 upstream binding transcription factor, RNA polymera... 33 0.56
gi|115529451 upstream binding transcription factor, RNA polymera... 33 0.56
gi|7657671 upstream binding transcription factor, RNA polymerase... 33 0.56
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 33 0.56
>gi|8922532 family with sequence similarity 82, member A2 [Homo
sapiens]
Length = 470
Score = 930 bits (2403), Expect = 0.0
Identities = 470/470 (100%), Positives = 470/470 (100%)
Query: 1 MSRLGALGGARAGLGLLLGTAAGLGFLCLLYSQRWKRTQRHGRSQSLPNSLDYTQTSDPG 60
MSRLGALGGARAGLGLLLGTAAGLGFLCLLYSQRWKRTQRHGRSQSLPNSLDYTQTSDPG
Sbjct: 1 MSRLGALGGARAGLGLLLGTAAGLGFLCLLYSQRWKRTQRHGRSQSLPNSLDYTQTSDPG 60
Query: 61 RHVMLLRAVPGGAGDASVLPSLPREGQEKVLDRLDFVLTSLVALRREVEELRSSLRGLAG 120
RHVMLLRAVPGGAGDASVLPSLPREGQEKVLDRLDFVLTSLVALRREVEELRSSLRGLAG
Sbjct: 61 RHVMLLRAVPGGAGDASVLPSLPREGQEKVLDRLDFVLTSLVALRREVEELRSSLRGLAG 120
Query: 121 EIVGEVRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTAN 180
EIVGEVRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTAN
Sbjct: 121 EIVGEVRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTAN 180
Query: 181 AESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLEDVLP 240
AESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLEDVLP
Sbjct: 181 AESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLEDVLP 240
Query: 241 LLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKKSY 300
LLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKKSY
Sbjct: 241 LLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKKSY 300
Query: 301 ALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQP 360
ALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQP
Sbjct: 301 ALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQP 360
Query: 361 ENPMAHFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAG 420
ENPMAHFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAG
Sbjct: 361 ENPMAHFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAG 420
Query: 421 RVYISKCYRELGKNSEARWWMKLALELPDVTKEDLAIQKDLEELEVILRD 470
RVYISKCYRELGKNSEARWWMKLALELPDVTKEDLAIQKDLEELEVILRD
Sbjct: 421 RVYISKCYRELGKNSEARWWMKLALELPDVTKEDLAIQKDLEELEVILRD 470
>gi|21389491 family with sequence similarity 82, member A1 [Homo
sapiens]
Length = 573
Score = 208 bits (529), Expect = 1e-53
Identities = 107/215 (49%), Positives = 140/215 (65%), Gaps = 1/215 (0%)
Query: 241 LLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKKSY 300
LLQ+ D L R E GK E F+LL ++K + +F+WR ARAY DM EL+ EKK Y
Sbjct: 360 LLQKVDHL-RMSESGKSESFELLRDHKEKFRDEIEFMWRFARAYGDMYELSTNTQEKKHY 418
Query: 301 ALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQP 360
A GK +E A+ + + CHLWYAVLCG ++E E +Q +I G FKEH+D AI L P
Sbjct: 419 ANIGKTLSERAINRAPMNGHCHLWYAVLCGYVSEFEGLQNKINYGHLFKEHLDIAIKLLP 478
Query: 361 ENPMAHFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAG 420
E P ++L GR+CY VS LSW+EKK A L S+TV++AL +FLKAEEL PG+S
Sbjct: 479 EEPFLYYLKGRYCYTVSKLSWIEKKMAATLFGKIPSSTVQEALHNFLKAEELCPGYSNPN 538
Query: 421 RVYISKCYRELGKNSEARWWMKLALELPDVTKEDL 455
+Y++KCY +L +N A + LAL LP VTKE+L
Sbjct: 539 YMYLAKCYTDLEENQNALKFCNLALLLPTVTKEEL 573
>gi|116875831 regulator of microtubule dynamics 1 [Homo sapiens]
Length = 314
Score = 135 bits (341), Expect = 6e-32
Identities = 77/225 (34%), Positives = 120/225 (53%), Gaps = 5/225 (2%)
Query: 241 LLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTE-EVSEKKS 299
+L+QAD L+ E K +QLL K + LWRLARA D+ +L+ EKK
Sbjct: 86 ILEQADYLYESGETEKL--YQLLTQYK--ESEDAELLWRLARASRDVAQLSRTSEEEKKL 141
Query: 300 YALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQ 359
+ E A+ ALEK + S H WYA+ + ++E I+ +I + + KEH +KAI L
Sbjct: 142 LVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKAIELN 201
Query: 360 PENPMAHFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKA 419
P++ + L+G WCY + + W +++ A L +P S+T E AL F +AE++ P F
Sbjct: 202 PKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQVDPNFYSK 261
Query: 420 GRVYISKCYRELGKNSEARWWMKLALELPDVTKEDLAIQKDLEEL 464
+ + K Y +L A +W+ A + P T+ED IQ + +L
Sbjct: 262 NLLLLGKTYLKLHNKKLAAFWLMKAKDYPAHTEEDKQIQTEAAQL 306
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 42.4 bits (98), Expect = 0.001
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 28/157 (17%)
Query: 104 LRREVEELRSSLRGLAGEIVGE---VRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFT 160
L R + E RS E++ + ++ EE +R RR R S T +S+
Sbjct: 357 LARRLRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASL--- 413
Query: 161 ASSGATFTDAESEGGYTTANAESDNERD--SDKESE-----------DGEDEVSCETVKM 207
SG + S+G + + AE+D+E D SD+E E D E+E E ++
Sbjct: 414 -DSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQE 472
Query: 208 GRKD--SLDLEEEAASGAS------SALEAGGSSGLE 236
G++D D EEEAA+G S+L+ LE
Sbjct: 473 GQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLE 509
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 42.4 bits (98), Expect = 0.001
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 28/157 (17%)
Query: 104 LRREVEELRSSLRGLAGEIVGE---VRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFT 160
L R + E RS E++ + ++ EE +R RR R S T +S+
Sbjct: 357 LARRLRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASL--- 413
Query: 161 ASSGATFTDAESEGGYTTANAESDNERD--SDKESE-----------DGEDEVSCETVKM 207
SG + S+G + + AE+D+E D SD+E E D E+E E ++
Sbjct: 414 -DSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQE 472
Query: 208 GRKD--SLDLEEEAASGAS------SALEAGGSSGLE 236
G++D D EEEAA+G S+L+ LE
Sbjct: 473 GQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLE 509
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 42.4 bits (98), Expect = 0.001
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 28/157 (17%)
Query: 104 LRREVEELRSSLRGLAGEIVGE---VRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFT 160
L R + E RS E++ + ++ EE +R RR R S T +S+
Sbjct: 369 LARRLRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASL--- 425
Query: 161 ASSGATFTDAESEGGYTTANAESDNERD--SDKESE-----------DGEDEVSCETVKM 207
SG + S+G + + AE+D+E D SD+E E D E+E E ++
Sbjct: 426 -DSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQE 484
Query: 208 GRKD--SLDLEEEAASGAS------SALEAGGSSGLE 236
G++D D EEEAA+G S+L+ LE
Sbjct: 485 GQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLE 521
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 37.7 bits (86), Expect = 0.023
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 133 NQRVARRRRFPFVRERSDSTGSSSVYFTASS-----GATFTDAESEGGYTTANAESDNER 187
N+ + + PF SDS G S +A S + + + SE G +++ESDNE
Sbjct: 666 NREKRKEKEKPFY---SDSEGESGPTESADSDPESESESDSKSSSESGSGESSSESDNE- 721
Query: 188 DSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADE 247
D D++ E G S ++ + G++ + E ASS+ E SS + +++E
Sbjct: 722 DQDEDEEKGRGSESEQSEEDGKRKTKKKVPERKGEASSSDEGSDSSSSSSESEMTSESEE 781
>gi|31563526 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 3 [Homo sapiens]
Length = 644
Score = 37.0 bits (84), Expect = 0.039
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 141 RFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDKESEDGEDE 199
+ P + TG SS +G D +E G T N DNE D ++E ++ +DE
Sbjct: 374 KIPIKHTVENGTGPSSAPDRGVNGTRRDDVVAEAGNETENENEDNENDEEEEEDEDDDE 432
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 37.0 bits (84), Expect = 0.039
Identities = 50/215 (23%), Positives = 76/215 (35%), Gaps = 15/215 (6%)
Query: 103 ALRREVEELRSSLRGLAGEIVGEVRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFTAS 162
ALR EV +LR L E+ + R +N AR + R+++ A
Sbjct: 729 ALREEVAQLRRKAEALGDELEAQARKLEAQNTEAARLSKELAQARRAEAEAHREAEAQAW 788
Query: 163 SGATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASG 222
A +A G +A + E + + G + E L + EAA
Sbjct: 789 EQARLREAVEAAGQELESASQEREALVEALAAAGRERRQWER----EGSRLRAQSEAAEE 844
Query: 223 ASSALEAGGSSGLEDVLPLLQQADELH--------RGDEQGKR-EGFQLLLNNKLVYGSR 273
LE+ G LE+ ++ + L RG E G R E Q L + R
Sbjct: 845 RMQVLESEGRQHLEEAERERREKEALQAELEKAVVRGKELGARLEHLQRELEQAAL--ER 902
Query: 274 QDFLWRLARAYSDMCELTEEVSEKKSYALDGKEEA 308
Q+FL + L + + + A KEEA
Sbjct: 903 QEFLREKESQHQRYQGLEQRLEAELQAAATSKEEA 937
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 36.6 bits (83), Expect = 0.050
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 31/158 (19%)
Query: 169 DAESEGGYTTANAESDNERDSD-----KESEDGEDEVSCETVKMGRKDSLDLEEEAASGA 223
++E E G T + E D+E++SD K+SEDG + E + G + LD E G+
Sbjct: 528 ESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSER---EFEENGLEKDLDEE-----GS 579
Query: 224 SSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARA 283
L E+VL ++ +E + + + +G + +L+ + GS ++F
Sbjct: 580 EKELH-------ENVLD--KELEENDSENSEFEDDGSEKVLDEE---GSEREF-----DE 622
Query: 284 YSDMCELTEEVSEKK-SYALDGKEEAEAALEKGDESAD 320
SD E E+ EK D KE+ E A EKG E+AD
Sbjct: 623 DSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAAD 660
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 36.6 bits (83), Expect = 0.050
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 31/158 (19%)
Query: 169 DAESEGGYTTANAESDNERDSD-----KESEDGEDEVSCETVKMGRKDSLDLEEEAASGA 223
++E E G T + E D+E++SD K+SEDG + E + G + LD E G+
Sbjct: 528 ESEEEVGPTKESEEDDSEKESDEDCSEKQSEDGSER---EFEENGLEKDLDEE-----GS 579
Query: 224 SSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARA 283
L E+VL ++ +E + + + +G + +L+ + GS ++F
Sbjct: 580 EKELH-------ENVLD--KELEENDSENSEFEDDGSEKVLDEE---GSEREF-----DE 622
Query: 284 YSDMCELTEEVSEKK-SYALDGKEEAEAALEKGDESAD 320
SD E E+ EK D KE+ E A EKG E+AD
Sbjct: 623 DSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAAD 660
>gi|224493919 zinc finger and SCAN domain containing 18 isoform 2
[Homo sapiens]
Length = 374
Score = 36.2 bits (82), Expect = 0.066
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)
Query: 163 SGATFTDAESEGG----YTTANAESDNERDSDKESEDGEDEVSCETVKMGRK-------D 211
SG T + E G +AESD+ S ++S + T K+G K D
Sbjct: 183 SGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 242
Query: 212 SLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLLLNNKLVYG 271
LE ++SG S+ LEAG G ++ P L + G+ L+ + +G
Sbjct: 243 GQSLEGVSSSGDSAGLEAGQGPGADE--PGLSRGKPYACGECGEAFAWLSHLMEHHSSHG 300
Query: 272 SRQDF----LWRLARAYSDMCELTEEVSEKKSYALDGKEEAEAALEKGDESA 319
R+ + W+ + E + ++KSYAL G + + + A
Sbjct: 301 GRKRYACQGCWKTFHFSLALAEHQKTHEKEKSYALGGARGPQPSTREAQAGA 352
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 36.2 bits (82), Expect = 0.066
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)
Query: 163 SGATFTDAESEGG----YTTANAESDNERDSDKESEDGEDEVSCETVKMGRK-------D 211
SG T + E G +AESD+ S ++S + T K+G K D
Sbjct: 319 SGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 378
Query: 212 SLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLLLNNKLVYG 271
LE ++SG S+ LEAG G ++ P L + G+ L+ + +G
Sbjct: 379 GQSLEGVSSSGDSAGLEAGQGPGADE--PGLSRGKPYACGECGEAFAWLSHLMEHHSSHG 436
Query: 272 SRQDF----LWRLARAYSDMCELTEEVSEKKSYALDGKEEAEAALEKGDESA 319
R+ + W+ + E + ++KSYAL G + + + A
Sbjct: 437 GRKRYACQGCWKTFHFSLALAEHQKTHEKEKSYALGGARGPQPSTREAQAGA 488
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 36.2 bits (82), Expect = 0.066
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)
Query: 163 SGATFTDAESEGG----YTTANAESDNERDSDKESEDGEDEVSCETVKMGRK-------D 211
SG T + E G +AESD+ S ++S + T K+G K D
Sbjct: 319 SGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 378
Query: 212 SLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLLLNNKLVYG 271
LE ++SG S+ LEAG G ++ P L + G+ L+ + +G
Sbjct: 379 GQSLEGVSSSGDSAGLEAGQGPGADE--PGLSRGKPYACGECGEAFAWLSHLMEHHSSHG 436
Query: 272 SRQDF----LWRLARAYSDMCELTEEVSEKKSYALDGKEEAEAALEKGDESA 319
R+ + W+ + E + ++KSYAL G + + + A
Sbjct: 437 GRKRYACQGCWKTFHFSLALAEHQKTHEKEKSYALGGARGPQPSTREAQAGA 488
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 36.2 bits (82), Expect = 0.066
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)
Query: 163 SGATFTDAESEGG----YTTANAESDNERDSDKESEDGEDEVSCETVKMGRK-------D 211
SG T + E G +AESD+ S ++S + T K+G K D
Sbjct: 375 SGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGD 434
Query: 212 SLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLLLNNKLVYG 271
LE ++SG S+ LEAG G ++ P L + G+ L+ + +G
Sbjct: 435 GQSLEGVSSSGDSAGLEAGQGPGADE--PGLSRGKPYACGECGEAFAWLSHLMEHHSSHG 492
Query: 272 SRQDF----LWRLARAYSDMCELTEEVSEKKSYALDGKEEAEAALEKGDESA 319
R+ + W+ + E + ++KSYAL G + + + A
Sbjct: 493 GRKRYACQGCWKTFHFSLALAEHQKTHEKEKSYALGGARGPQPSTREAQAGA 544
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 35.4 bits (80), Expect = 0.11
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Query: 170 AESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRK-DSLDLEEEAASGASSA-- 226
A+ E +ES+ E DS S D E E E+ + G + D E+++ +SS
Sbjct: 666 AKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQD 725
Query: 227 LEAGGSSGLEDVLPLLQQADELHRGD-EQGKREGFQLLLNNKLVYGSRQDFLWRLARAYS 285
E+G SGLE+ + + + D E G++E S D + + S
Sbjct: 726 SESGRESGLENKRTAKRNSKAKGKSDSEDGEKEN-----EKSKTSDSSNDESSSIEDSSS 780
Query: 286 DMCELTEEVSEKKSYALDGKEEAEAALEKGDESADCHL 323
D +E SE +S + ++E + ++ + D L
Sbjct: 781 DSESESEPESESESRRVTKEKEKKTKQDRTPLTKDVSL 818
Score = 32.0 bits (71), Expect = 1.2
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Query: 147 ERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDKESEDGEDE------- 199
E DS+ SSS + S + ES G +N +S + S+++SE G +
Sbjct: 681 EEEDSSDSSSDSESESGSESGEQGES-GEEGDSNEDSSEDSSSEQDSESGRESGLENKRT 739
Query: 200 VSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLED 237
+ G+ DS D E+E +S SS +ED
Sbjct: 740 AKRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIED 777
Score = 29.6 bits (65), Expect = 6.2
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 132 ENQRVARRRRFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDK 191
EN+R A+R + +SDS + + +D+ ++ + ++ SD+E +S+
Sbjct: 735 ENKRTAKRNSK--AKGKSDSEDGEK----ENEKSKTSDSSNDESSSIEDSSSDSESESEP 788
Query: 192 ESEDGEDEVSCETVKMGRKDSLDLEEEAA 220
ESE V+ E K ++D L ++ +
Sbjct: 789 ESESESRRVTKEKEKKTKQDRTPLTKDVS 817
>gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b
[Homo sapiens]
Length = 806
Score = 35.4 bits (80), Expect = 0.11
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 104 LRREVEELRSSLRGLAGEIVGEVRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFTASS 163
L+ E+++ R S +GL E++ ++ +++ + R P G+ S+ S
Sbjct: 16 LKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEP---------GNGSLDLGGDS 66
Query: 164 GATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGA 223
G + A E + D+E E+ E+E E + D ++L EE +GA
Sbjct: 67 A----------GRSGAGLEQEAAAGGDEEEEEEEEEE--EGISALDGDQMELGEE--NGA 112
Query: 224 SSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREG 259
+ A ++G E A E GD+QG +EG
Sbjct: 113 AGAADSGPMEEEE-------AASEDENGDDQGFQEG 141
>gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a
[Homo sapiens]
Length = 825
Score = 35.4 bits (80), Expect = 0.11
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 104 LRREVEELRSSLRGLAGEIVGEVRCHMEENQRVARRRRFPFVRERSDSTGSSSVYFTASS 163
L+ E+++ R S +GL E++ ++ +++ + R P G+ S+ S
Sbjct: 16 LKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEP---------GNGSLDLGGDS 66
Query: 164 GATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGA 223
G + A E + D+E E+ E+E E + D ++L EE +GA
Sbjct: 67 A----------GRSGAGLEQEAAAGGDEEEEEEEEEE--EGISALDGDQMELGEE--NGA 112
Query: 224 SSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREG 259
+ A ++G E A E GD+QG +EG
Sbjct: 113 AGAADSGPMEEEE-------AASEDENGDDQGFQEG 141
>gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]
Length = 1259
Score = 34.7 bits (78), Expect = 0.19
Identities = 49/194 (25%), Positives = 75/194 (38%), Gaps = 31/194 (15%)
Query: 135 RVARRRRFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERD---SDK 191
+VA RRR + + RS S + D +E TT + E D E D +
Sbjct: 18 QVASRRRKAWAKCRSSWQASET-----------EDLSTEA--TTQDEEEDEEEDLPGAQL 64
Query: 192 ESEDGEDEVSCETVKMGRKD-----SLDLEEEAASGASSALEAGGSSGLEDVLPLLQQAD 246
+ G V E + + KD L+E+++S L G S ED L L +A+
Sbjct: 65 PAAGGRGNVPNEKIAIWLKDCRTPLGASLDEQSSSTLKGVLVRNGGS-FEDDLSLGAEAN 123
Query: 247 ELHRGDEQ--------GKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKK 298
LH D Q K Q + + + + S++ EL EE E+
Sbjct: 124 HLHESDAQIENCNNILAKERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEI 183
Query: 299 SYALD-GKEEAEAA 311
Y L G++E + A
Sbjct: 184 LYNLGFGRDEPDIA 197
>gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]
Length = 1256
Score = 34.7 bits (78), Expect = 0.19
Identities = 49/194 (25%), Positives = 75/194 (38%), Gaps = 31/194 (15%)
Query: 135 RVARRRRFPFVRERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERD---SDK 191
+VA RRR + + RS S + D +E TT + E D E D +
Sbjct: 18 QVASRRRKAWAKCRSSWQASET-----------EDLSTEA--TTQDEEEDEEEDLPGAQL 64
Query: 192 ESEDGEDEVSCETVKMGRKD-----SLDLEEEAASGASSALEAGGSSGLEDVLPLLQQAD 246
+ G V E + + KD L+E+++S L G S ED L L +A+
Sbjct: 65 PAAGGRGNVPNEKIAIWLKDCRTPLGASLDEQSSSTLKGVLVRNGGS-FEDDLSLGAEAN 123
Query: 247 ELHRGDEQ--------GKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSEKK 298
LH D Q K Q + + + + S++ EL EE E+
Sbjct: 124 HLHESDAQIENCNNILAKERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEI 183
Query: 299 SYALD-GKEEAEAA 311
Y L G++E + A
Sbjct: 184 LYNLGFGRDEPDIA 197
>gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo
sapiens]
Length = 638
Score = 34.7 bits (78), Expect = 0.19
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 18/158 (11%)
Query: 171 ESEGGYTTANAESDNER--------DSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASG 222
E +G AE+D+E+ D DKE E+ E+ CE + L E+ G
Sbjct: 269 EQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRG 328
Query: 223 ASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLL--LNNKLVYGSR-QDFLWR 279
L+A S + L Q L R Q K E ++ L G R ++ L +
Sbjct: 329 ---HLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKK 385
Query: 280 LARAYSDMCELTEEVSEKKSYALDGKE----EAEAALE 313
RA + E +EE +E+ L K+ EA + LE
Sbjct: 386 AIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLE 423
>gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo
sapiens]
Length = 805
Score = 34.7 bits (78), Expect = 0.19
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 18/158 (11%)
Query: 171 ESEGGYTTANAESDNER--------DSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASG 222
E +G AE+D+E+ D DKE E+ E+ CE + L E+ G
Sbjct: 264 EQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRG 323
Query: 223 ASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKREGFQLL--LNNKLVYGSR-QDFLWR 279
L+A S + L Q L R Q K E ++ L G R ++ L +
Sbjct: 324 ---HLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKK 380
Query: 280 LARAYSDMCELTEEVSEKKSYALDGKE----EAEAALE 313
RA + E +EE +E+ L K+ EA + LE
Sbjct: 381 AIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLE 418
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 34.3 bits (77), Expect = 0.25
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 146 RERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVSCETV 205
++RS S SSS ++SS ++ +D+ SE T+ ++ S+ + D+D+ S S T
Sbjct: 80 KKRSKSVTSSS---SSSSDSSASDSSSESEETSTSSSSE-DSDTDESSSSSSSSASSTT- 134
Query: 206 KMGRKDSLDLEEEAASGASSALEAGGSS 233
S D + +++S +SS+ SS
Sbjct: 135 ---SSSSSDSDSDSSSSSSSSTSTDSSS 159
>gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
Length = 110
Score = 33.9 bits (76), Expect = 0.33
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 169 DAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALE 228
DA + G N E + + + D+E E+G +E E G ++ D +EEA S ++
Sbjct: 32 DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAES--ATGKR 89
Query: 229 AGGSSGLEDVLPLLQQADE 247
A +DV Q+ DE
Sbjct: 90 AAEDDEDDDVDTKKQKTDE 108
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 33.9 bits (76), Expect = 0.33
Identities = 46/193 (23%), Positives = 74/193 (38%), Gaps = 37/193 (19%)
Query: 82 LPREGQEKVLDRLDFVLTSLVALRREVEE---LRSSLRGLA----GEIVGEVRCHM--EE 132
+PRE E+V L S ++ E R S++ ++ G V + R H+ ++
Sbjct: 422 VPREEDEEVSAELGHQAPSHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDD 481
Query: 133 NQRVARRRRFPFVRERSDSTGSSSVYFTASSGATFTDAESE--GGYTTANAESDNERDSD 190
++ + P E D + T D E E G + N E + E D +
Sbjct: 482 SEEEKEKEEDPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKE 541
Query: 191 KESEDGEDEVSCETVKMGRKDSLD-----------LEE---------------EAASGAS 224
+E E+ ++E E ++G S D LEE E A GAS
Sbjct: 542 EEEEEEDEERREERAEVGAPLSPDHSEEEEEEEEGLEEDEPRFTIIPNPLDRREEAGGAS 601
Query: 225 SALEAGGSSGLED 237
S E+G +G +D
Sbjct: 602 SEEESGEDTGPQD 614
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 33.1 bits (74), Expect = 0.56
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 169 DAESEGGYTTAN---AESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASS 225
+ ESE G + + +ES+ E ++++ESED DE S E + +D + E E +
Sbjct: 90 EIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEG 149
Query: 226 ALEAGGSSGLE 236
EA G + E
Sbjct: 150 ESEAEGETEAE 160
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 33.1 bits (74), Expect = 0.56
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 169 DAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALE 228
+ + E G ++ + +E S+ ESEDG++ + + +D + E+ + G+SS+
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 229 AGGSSGLED 237
+ G S D
Sbjct: 717 SSGDSSDSD 725
Score = 29.6 bits (65), Expect = 6.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 147 ERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVS 201
E D G SS SS ++ D ESE G N E D + D D++ ++ ED S
Sbjct: 657 EEDDENGDSSEDGGDSSESSSED-ESEDG--DENEEDDEDEDDDEDDDEDEDNES 708
Score = 29.3 bits (64), Expect = 8.1
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 177 TTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLE 236
TT ++S++E D D+E ED EDE E S D + + S + E G + +
Sbjct: 632 TTLQSKSESEED-DEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED 690
Query: 237 DVLPLLQQADELHRGDEQGKREG 259
D + DE DE + EG
Sbjct: 691 DE---DEDDDEDDDEDEDNESEG 710
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 33.1 bits (74), Expect = 0.56
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 169 DAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALE 228
+ + E G ++ + +E S+ ESEDG++ + + +D + E+ + G+SS+
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 229 AGGSSGLED 237
+ G S D
Sbjct: 717 SSGDSSDSD 725
Score = 29.6 bits (65), Expect = 6.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 147 ERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVS 201
E D G SS SS ++ D ESE G N E D + D D++ ++ ED S
Sbjct: 657 EEDDENGDSSEDGGDSSESSSED-ESEDG--DENEEDDEDEDDDEDDDEDEDNES 708
Score = 29.3 bits (64), Expect = 8.1
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 177 TTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLE 236
TT ++S++E D D+E ED EDE E S D + + S + E G + +
Sbjct: 632 TTLQSKSESEED-DEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED 690
Query: 237 DVLPLLQQADELHRGDEQGKREG 259
D + DE DE + EG
Sbjct: 691 DE---DEDDDEDDDEDEDNESEG 710
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 33.1 bits (74), Expect = 0.56
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 169 DAESEGGYTTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALE 228
+ + E G ++ + +E S+ ESEDG++ + + +D + E+ + G+SS+
Sbjct: 694 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 753
Query: 229 AGGSSGLED 237
+ G S D
Sbjct: 754 SSGDSSDSD 762
Score = 29.6 bits (65), Expect = 6.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 147 ERSDSTGSSSVYFTASSGATFTDAESEGGYTTANAESDNERDSDKESEDGEDEVS 201
E D G SS SS ++ D ESE G N E D + D D++ ++ ED S
Sbjct: 694 EEDDENGDSSEDGGDSSESSSED-ESEDG--DENEEDDEDEDDDEDDDEDEDNES 745
Score = 29.3 bits (64), Expect = 8.1
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 177 TTANAESDNERDSDKESEDGEDEVSCETVKMGRKDSLDLEEEAASGASSALEAGGSSGLE 236
TT ++S++E D D+E ED EDE E S D + + S + E G + +
Sbjct: 669 TTLQSKSESEED-DEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED 727
Query: 237 DVLPLLQQADELHRGDEQGKREG 259
D + DE DE + EG
Sbjct: 728 DE---DEDDDEDDDEDEDNESEG 747
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 33.1 bits (74), Expect = 0.56
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 84 REGQEKVLDRLDFVLT-----SLVALRREVEELRSSLRGLAGEIVGEVRCHMEENQRVAR 138
RE E+ + L L +L+ R+++++L S +R L GE+ GE+R E QR AR
Sbjct: 1795 RENMEQTITDLQKRLAEAEQMALMGSRKQIQKLESRVRELEGELEGEIR-RSAEAQRGAR 1853
Query: 139 R 139
R
Sbjct: 1854 R 1854
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,697,179
Number of Sequences: 37866
Number of extensions: 809578
Number of successful extensions: 4064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 3664
Number of HSP's gapped (non-prelim): 417
length of query: 470
length of database: 18,247,518
effective HSP length: 106
effective length of query: 364
effective length of database: 14,233,722
effective search space: 5181074808
effective search space used: 5181074808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.