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Search of human proteins with 8922416
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922416 NECAP endocytosis associated 2 isoform 1 [Homo
sapiens]
(263 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922416 NECAP endocytosis associated 2 isoform 1 [Homo sapiens] 546 e-156
gi|223942035 NECAP endocytosis associated 2 isoform 3 [Homo sapi... 481 e-136
gi|223942032 NECAP endocytosis associated 2 isoform 2 [Homo sapi... 457 e-129
gi|31542528 NECAP endocytosis associated 1 [Homo sapiens] 342 3e-94
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 41 0.001
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 41 0.001
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 41 0.001
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 40 0.003
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 40 0.003
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 40 0.003
gi|91208420 bassoon protein [Homo sapiens] 38 0.008
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 38 0.008
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 37 0.018
gi|239755652 PREDICTED: hypothetical protein [Homo sapiens] 37 0.023
gi|239750190 PREDICTED: hypothetical protein [Homo sapiens] 37 0.023
gi|239744495 PREDICTED: hypothetical protein XP_002343166 [Homo ... 37 0.023
gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens] 37 0.023
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.023
gi|157168329 formin 1 [Homo sapiens] 36 0.030
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 36 0.039
gi|27262663 colony stimulating factor 1 isoform b precursor [Hom... 35 0.051
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 35 0.051
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 35 0.067
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 35 0.087
gi|4505959 POU domain, class 2, transcription factor 2 [Homo sap... 35 0.087
gi|118582284 msh homeobox 1 [Homo sapiens] 34 0.11
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens] 34 0.11
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens] 34 0.11
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 34 0.11
gi|116292174 fidgetin-like 2 [Homo sapiens] 34 0.11
>gi|8922416 NECAP endocytosis associated 2 isoform 1 [Homo sapiens]
Length = 263
Score = 546 bits (1406), Expect = e-156
Identities = 263/263 (100%), Positives = 263/263 (100%)
Query: 1 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLE 60
MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLE
Sbjct: 1 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLE 60
Query: 61 DRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNV 120
DRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNV
Sbjct: 61 DRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNV 120
Query: 121 ALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPA 180
ALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPA
Sbjct: 121 ALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPA 180
Query: 181 STGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIW 240
STGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIW
Sbjct: 181 STGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIW 240
Query: 241 GDFTKSTGSTSSQTQPGTGWVQF 263
GDFTKSTGSTSSQTQPGTGWVQF
Sbjct: 241 GDFTKSTGSTSSQTQPGTGWVQF 263
>gi|223942035 NECAP endocytosis associated 2 isoform 3 [Homo
sapiens]
Length = 237
Score = 481 bits (1237), Expect = e-136
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 32 AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF 91
AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF
Sbjct: 6 AAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYF 65
Query: 92 VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG 151
VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG
Sbjct: 66 VIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLG 125
Query: 152 FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG 211
FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG
Sbjct: 126 FKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGG 185
Query: 212 SLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF 263
SLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF
Sbjct: 186 SLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF 237
>gi|223942032 NECAP endocytosis associated 2 isoform 2 [Homo
sapiens]
Length = 273
Score = 457 bits (1176), Expect = e-129
Identities = 232/260 (89%), Positives = 235/260 (90%), Gaps = 4/260 (1%)
Query: 1 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLE 60
MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLE
Sbjct: 1 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLE 60
Query: 61 DRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNV 120
DRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNV
Sbjct: 61 DRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNV 120
Query: 121 ALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPA 180
ALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPA
Sbjct: 121 ALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPA 180
Query: 181 STGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIW 240
STGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSS P +P+ A A
Sbjct: 181 STGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSDQLPA---RPSQAQAGSS 237
Query: 241 GDF-TKSTGSTSSQTQPGTG 259
D T TS + P G
Sbjct: 238 SDLSTVFPHVTSGKALPHLG 257
>gi|31542528 NECAP endocytosis associated 1 [Homo sapiens]
Length = 275
Score = 342 bits (876), Expect = 3e-94
Identities = 171/276 (61%), Positives = 203/276 (73%), Gaps = 19/276 (6%)
Query: 3 ESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLEDR 62
E YESVLCVKPDV VYRIPPRA+NRGYRA++W+LDQP W+GRLRIT+KG+ AYIKLED+
Sbjct: 4 ELEYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDK 63
Query: 63 TSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNVAL 122
SGELFAQAPV+Q+PG AVE+VTDSSRYFVIRI+DG GR AFIGIGF DRGDAFDFNV+L
Sbjct: 64 VSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSL 123
Query: 123 QDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPAST 182
QDHFKWVKQ+ E +K++Q D PKLDLGFKEGQTIKL I N+ K+G A PR A
Sbjct: 124 QDHFKWVKQESEISKESQEMDARPKLDLGFKEGQTIKLCIGNITNKKGGASKPRT--ARG 181
Query: 183 GGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGG-------------APVPW 229
GGLSLLPPPPGGK + IPPP +A+ + P + S+ G APV
Sbjct: 182 GGLSLLPPPPGGKVT--IPPPSSSVAISNHVTPPPIPKSNHGGSDADILLDLDSPAPVTT 239
Query: 230 PQPNPATA--DIWGDFTKSTGSTSSQTQPGTGWVQF 263
P P P + D+WGDF+ ++ S +Q + WVQF
Sbjct: 240 PAPTPVSVSNDLWGDFSTASSSVPNQAPQPSNWVQF 275
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 40.8 bits (94), Expect = 0.001
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 179 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATAD 238
P+ GG ++ PPPP +T+ PPP L G + P+ P GG +P P P P +A
Sbjct: 622 PSLPGGTAISPPPPLSGDATIPPPP--PLPEGVGIPSPSSLP--GGTAIPPPPPLPGSAR 677
Query: 239 I 239
I
Sbjct: 678 I 678
Score = 35.8 bits (81), Expect = 0.039
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 179 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQP 232
P+S G + +PPPP S IPPP L G + + P P G A +P P P
Sbjct: 657 PSSLPGGTAIPPPPPLPGSARIPPPPPPLP-GSAGIPPPPPPLPGEAGMPPPPP 709
Score = 34.3 bits (77), Expect = 0.11
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 229
G+A P P G + PPPP +PPP L G + P P G P P
Sbjct: 674 GSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPP 733
Query: 230 P 230
P
Sbjct: 734 P 734
Score = 32.3 bits (72), Expect = 0.43
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 183 GGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 234
GG ++ PPPP ++ + PPP G P P G P P P P P
Sbjct: 662 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP-PPPLP 712
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 20/73 (27%)
Query: 179 PASTGGLSLLPPPPGGKTSTLIPPP-----------------GEQLAVGGSLVQPAVAPS 221
P +G +++PPPP ST PPP GG+ + P P
Sbjct: 580 PGDSG--TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP-PPL 636
Query: 222 SGGAPVPWPQPNP 234
SG A +P P P P
Sbjct: 637 SGDATIPPPPPLP 649
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 179 PASTGGLSLLPPPPGG-KTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 234
P G + +PPPP S IPPP L G + + P P GG +P P P P
Sbjct: 669 PPPLPGSARIPPPPPPLPGSAGIPPPPPPLP-GEAGMPPPPPPLPGGPGIPPPPPFP 724
Score = 28.9 bits (63), Expect = 4.8
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 179 PASTGGLSLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPAT 236
P S + +PP P G + T+IPPP A G S P P P P P P P
Sbjct: 564 PPSVPSRAPVPPAPPLPGDSGTIIPPPP---APGDSTTPPPPPP-----PPPPPPPLPGG 615
Query: 237 ADIWGDFTKSTGSTSSQTQPGTG 259
I + G+ S P +G
Sbjct: 616 VCISSPPSLPGGTAISPPPPLSG 638
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 40.8 bits (94), Expect = 0.001
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 179 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATAD 238
P+ GG ++ PPPP +T+ PPP L G + P+ P GG +P P P P +A
Sbjct: 631 PSLPGGTAISPPPPLSGDATIPPPP--PLPEGVGIPSPSSLP--GGTAIPPPPPLPGSAR 686
Query: 239 I 239
I
Sbjct: 687 I 687
Score = 35.8 bits (81), Expect = 0.039
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 179 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQP 232
P+S G + +PPPP S IPPP L G + + P P G A +P P P
Sbjct: 666 PSSLPGGTAIPPPPPLPGSARIPPPPPPLP-GSAGIPPPPPPLPGEAGMPPPPP 718
Score = 34.3 bits (77), Expect = 0.11
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 229
G+A P P G + PPPP +PPP L G + P P G P P
Sbjct: 683 GSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPP 742
Query: 230 P 230
P
Sbjct: 743 P 743
Score = 32.3 bits (72), Expect = 0.43
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 183 GGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 234
GG ++ PPPP ++ + PPP G P P G P P P P P
Sbjct: 671 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP-PPPLP 721
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 20/73 (27%)
Query: 179 PASTGGLSLLPPPPGGKTSTLIPPP-----------------GEQLAVGGSLVQPAVAPS 221
P +G +++PPPP ST PPP GG+ + P P
Sbjct: 589 PGDSG--TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP-PPL 645
Query: 222 SGGAPVPWPQPNP 234
SG A +P P P P
Sbjct: 646 SGDATIPPPPPLP 658
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 179 PASTGGLSLLPPPPGG-KTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 234
P G + +PPPP S IPPP L G + + P P GG +P P P P
Sbjct: 678 PPPLPGSARIPPPPPPLPGSAGIPPPPPPLP-GEAGMPPPPPPLPGGPGIPPPPPFP 733
Score = 28.9 bits (63), Expect = 4.8
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 179 PASTGGLSLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPAT 236
P S + +PP P G + T+IPPP A G S P P P P P P P
Sbjct: 573 PPSVPSRAPVPPAPPLPGDSGTIIPPPP---APGDSTTPPPPPP-----PPPPPPPLPGG 624
Query: 237 ADIWGDFTKSTGSTSSQTQPGTG 259
I + G+ S P +G
Sbjct: 625 VCISSPPSLPGGTAISPPPPLSG 647
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 40.8 bits (94), Expect = 0.001
Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 229
G G P P +TG LPPPP G +PPP P PSSG P P
Sbjct: 363 GRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPP---------PPPPPPSSGNGPAPP 413
Query: 230 PQP 232
P P
Sbjct: 414 PLP 416
Score = 36.2 bits (82), Expect = 0.030
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 189 PPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 234
PPPPG PPP A G S P P +GG P+P P P P
Sbjct: 359 PPPPGRGG----PPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 39.7 bits (91), Expect = 0.003
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLV-----QPAVAPSSGG 224
GAAG P V + S++P P G P EQ+ GS QPA AP G
Sbjct: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGA 1066
Query: 225 APVPWPQPNP 234
P P P P
Sbjct: 1067 VPPGVPPPGP 1076
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 39.7 bits (91), Expect = 0.003
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLV-----QPAVAPSSGG 224
GAAG P V + S++P P G P EQ+ GS QPA AP G
Sbjct: 976 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGA 1035
Query: 225 APVPWPQPNP 234
P P P P
Sbjct: 1036 VPPGVPPPGP 1045
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 39.7 bits (91), Expect = 0.003
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLV-----QPAVAPSSGG 224
GAAG P V + S++P P G P EQ+ GS QPA AP G
Sbjct: 1007 GAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGA 1066
Query: 225 APVPWPQPNP 234
P P P P
Sbjct: 1067 VPPGVPPPGP 1076
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 38.1 bits (87), Expect = 0.008
Identities = 24/75 (32%), Positives = 29/75 (38%)
Query: 162 IANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPS 221
+ N EG AG+ + P G P PG P G QL G+ AV P
Sbjct: 1 MGNEVSLEGGAGDGPLPPGGAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPV 60
Query: 222 SGGAPVPWPQPNPAT 236
G P P P P P +
Sbjct: 61 PGPGPGPGPGPGPGS 75
Score = 28.9 bits (63), Expect = 4.8
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 14/68 (20%)
Query: 172 AGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQ 231
AG P+ P++ G P P G PP EQ GS A AP G AP P
Sbjct: 3818 AGKPQPGPSTATG-----PQPAG------PPRAEQ--TNGSK-GTAKAPQQGRAPQAQPA 3863
Query: 232 PNPATADI 239
P P A +
Sbjct: 3864 PGPGPAGV 3871
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 38.1 bits (87), Expect = 0.008
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 16/107 (14%)
Query: 143 DQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPP 202
D L L + + L A +EGAAG+ A+ GG GG +PP
Sbjct: 54 DAAAALRLALDQLSALGLGGAGDTDEEGAAGD---GAAAAGGAD------GGAAPEPVPP 104
Query: 203 PGEQLAVGGSLVQPAVAPSS------GGAPVPWPQPNPATADIWGDF 243
G + +L PAVAP S +P P P P P+ D++ F
Sbjct: 105 DGPEAGAPPTLA-PAVAPGSLPLLDPNASPPPPPPPRPSPPDVFAGF 150
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 37.0 bits (84), Expect = 0.018
Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 26/134 (19%)
Query: 142 PDQGPKLDL--GFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGLSL------------ 187
P +GP + +GQ+I L G + V P +T GLS
Sbjct: 264 PGEGPSTSVLPAASDGQSISL-----VPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSST 318
Query: 188 -LPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKS 246
+PP PGG ST +PP + P PS+ P+P + + T S
Sbjct: 319 SVPPTPGGGLSTSVPPTATEELSTSVPPTPGEGPSTSVLPIPGEGLSTSVPP-----TAS 373
Query: 247 TGS-TSSQTQPGTG 259
GS TS PG G
Sbjct: 374 DGSDTSVPPTPGEG 387
Score = 32.0 bits (71), Expect = 0.57
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPV 227
G + V P GLS PP G +++ P PGE + +LVQP G + +
Sbjct: 349 GEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGAS---TLVQPTAPDGPGSSVL 405
Query: 228 PWPQPNPAT 236
P P P+T
Sbjct: 406 PNPGEGPST 414
Score = 31.6 bits (70), Expect = 0.74
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 188 LPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKST 247
LPP PG TST +PP + + P PS+ P P P + +
Sbjct: 164 LPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSV-----PLAATE 218
Query: 248 G-STSSQTQPGTG 259
G STS Q P G
Sbjct: 219 GLSTSVQATPDEG 231
>gi|239755652 PREDICTED: hypothetical protein [Homo sapiens]
Length = 158
Score = 36.6 bits (83), Expect = 0.023
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 169 EGAAGNPRVRPASTGGL--SLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGG 224
EG + R P GG S L PG ++ L PPPG +A G+L P P GG
Sbjct: 51 EGGSRRHRALPGRPGGPRGSRLSSRPGVPSRSRQLTPPPGSPMASFGALATP--DPPVGG 108
Query: 225 APVPWPQPNPA 235
AP P P A
Sbjct: 109 APAPALLPGQA 119
>gi|239750190 PREDICTED: hypothetical protein [Homo sapiens]
Length = 158
Score = 36.6 bits (83), Expect = 0.023
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 169 EGAAGNPRVRPASTGGL--SLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGG 224
EG + R P GG S L PG ++ L PPPG +A G+L P P GG
Sbjct: 51 EGGSRRHRALPGRPGGPRGSRLSSRPGVPSRSRQLTPPPGSPMASFGALATP--DPPVGG 108
Query: 225 APVPWPQPNPA 235
AP P P A
Sbjct: 109 APAPALLPGQA 119
>gi|239744495 PREDICTED: hypothetical protein XP_002343166 [Homo
sapiens]
Length = 158
Score = 36.6 bits (83), Expect = 0.023
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 169 EGAAGNPRVRPASTGGL--SLLPPPPG--GKTSTLIPPPGEQLAVGGSLVQPAVAPSSGG 224
EG + R P GG S L PG ++ L PPPG +A G+L P P GG
Sbjct: 51 EGGSRRHRALPGRPGGPRGSRLSSRPGVPSRSRQLTPPPGSPMASFGALATP--DPPVGG 108
Query: 225 APVPWPQPNPA 235
AP P P A
Sbjct: 109 APAPALLPGQA 119
>gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens]
Length = 493
Score = 36.6 bits (83), Expect = 0.023
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 181 STGGLSLLPPPPGGKT--------STLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQP 232
STG L + PPPGG + +I P G +L V G V A ++ V P
Sbjct: 84 STGSLGSVAPPPGGHSHGPGVYHHGAIISPAGRELLVAGGNVVDAGVGAALCLAVVHPHA 143
Query: 233 NPATADIWGDFTKSTGSTSSQTQPG 257
A WG F S+ S+ G
Sbjct: 144 TGLGAMFWGLFHDSSSGNSTALTSG 168
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.6 bits (83), Expect = 0.023
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAP 226
+GA P P S G PPP G T + PP + G+ PA PSS G P
Sbjct: 1307 KGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK----GTPTLPATTPSSKGGP 1360
Score = 35.8 bits (81), Expect = 0.039
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 222
+GA P P S G PPP G T+ PP + + G+ PA P S
Sbjct: 1123 KGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1182
Query: 223 -GGAPVPWPQPNPAT 236
GG P P+ P T
Sbjct: 1183 KGGLATPSPKGAPTT 1197
Score = 34.7 bits (78), Expect = 0.087
Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQP--AVAPSSGGAP 226
+GA P P S G PPP G T PP ++ G L P AP+
Sbjct: 1238 KGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP----SLKGGLATPPHKGAPNPAVVT 1293
Query: 227 VPWPQPNPATADIWGDFTKSTGS-TSSQTQPGT 258
P P+ PAT+ G T + S + PGT
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPKGSPGT 1326
Score = 32.7 bits (73), Expect = 0.33
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 169 EGAAGNPRVRPASTGGLSLLPP-PPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPV 227
+GA P V P S G P P G T PP + + + + P AP++ A +
Sbjct: 1006 KGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPL-PKGAPTTPAATL 1064
Query: 228 PWPQPNPATADIWG 241
P P+ PAT + G
Sbjct: 1065 PSPKGGPATPSLKG 1078
Score = 32.7 bits (73), Expect = 0.33
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 222
+GA P P S G P P G T+ PP + + G+ PA P S
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP 1228
Query: 223 -GGAPVPWPQPNPAT 236
GG P P+ P T
Sbjct: 1229 KGGLATPSPKGAPTT 1243
Score = 32.3 bits (72), Expect = 0.43
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQ-------LAVGGSLVQPAVAPS 221
+GA P P S G P P G T + PP + G S A PS
Sbjct: 983 KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS 1042
Query: 222 SGGAPVPWPQPNPA 235
G+P P P A
Sbjct: 1043 PKGSPAATPLPKGA 1056
Score = 30.8 bits (68), Expect = 1.3
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 222
+GA P P S G PP G T+ PP + + G+ PA P S
Sbjct: 1100 KGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1159
Query: 223 -GGAPVPWPQPNPAT 236
GG P P+ P T
Sbjct: 1160 KGGLATPPPKGAPTT 1174
Score = 29.6 bits (65), Expect = 2.8
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVP 228
+GA P P S G P P T PP + G + P AP+ A P
Sbjct: 937 KGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPK--GGPATPSPKGAPTPPAATPP 994
Query: 229 WPQPNPAT 236
P+ PAT
Sbjct: 995 SPKGGPAT 1002
Score = 28.9 bits (63), Expect = 4.8
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 175 PRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVP--WPQP 232
P P S G P P G T PP + GG PA PS GAP P P
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATPPSPK---GG----PA-TPSPKGAPTPPAVTPP 1017
Query: 233 NPATADIWGDFTKSTGSTSSQTQP 256
+P + F K + + T P
Sbjct: 1018 SPKGSPAATPFPKGASTPPAATPP 1041
Score = 28.9 bits (63), Expect = 4.8
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 222
+GA P P S G P P G PP + + G+ PA P S
Sbjct: 1077 KGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP 1136
Query: 223 -GGAPVPWPQPNPAT 236
GG P P+ P T
Sbjct: 1137 KGGLATPPPKGAPTT 1151
Score = 28.9 bits (63), Expect = 4.8
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSS- 222
+GA P P S G P P G T+ PP + G+ PA P S
Sbjct: 1215 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSL 1274
Query: 223 -GGAPVPWPQ--PNPA 235
GG P + PNPA
Sbjct: 1275 KGGLATPPHKGAPNPA 1290
Score = 28.1 bits (61), Expect = 8.2
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 169 EGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVG-----GSLVQPAVAPSSG 223
+GA V P S G PP G T PP + + G G+ PAV P S
Sbjct: 1284 KGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSP 1343
Query: 224 GAPVPWPQPNPAT 236
P P++
Sbjct: 1344 KGTPTLPATTPSS 1356
Score = 28.1 bits (61), Expect = 8.2
Identities = 27/99 (27%), Positives = 33/99 (33%), Gaps = 15/99 (15%)
Query: 173 GNPRVRPASTGGLSLLPPPPGGKTSTLIPP-------------PGEQLAVGGSLVQPAVA 219
G P + P S +P P G TS + P G G L PAV
Sbjct: 1380 GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVT 1439
Query: 220 PSS--GGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQP 256
P S P+ PAT GD T + S +P
Sbjct: 1440 PVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP 1478
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 36.2 bits (82), Expect = 0.030
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 13/72 (18%)
Query: 163 ANMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSS 222
A ++ EG A N + LPPPP +++ PPP +G P + P S
Sbjct: 629 AALQPMEGMASNQQ---------KALPPPP----ASIPPPPPLPSGLGSLSPAPPMPPVS 675
Query: 223 GGAPVPWPQPNP 234
G P+P P P P
Sbjct: 676 AGPPLPPPPPPP 687
Score = 33.1 bits (74), Expect = 0.25
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 179 PASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQ----PAVAPSSGGAPVPW 229
P + GG PPPPG PPPG +G S Q PA+ PS P+ W
Sbjct: 713 PPNPGGPPPAPPPPGLAPP---PPPGLFFGLGSSSSQCPRKPAIEPSCPMKPLYW 764
Score = 31.2 bits (69), Expect = 0.96
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 8/60 (13%)
Query: 175 PRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNP 234
P P+ G LS PP P +PPP P + P S P P P P P
Sbjct: 655 PPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPP--------PPPLPPPSSAGPPPPPPPPP 706
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 35.8 bits (81), Expect = 0.039
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVP 228
GA G P P+S G L PPPP ++PPP L GG P P P P
Sbjct: 534 GAPGGPF--PSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPP 590
>gi|27262663 colony stimulating factor 1 isoform b precursor [Homo
sapiens]
Length = 438
Score = 35.4 bits (80), Expect = 0.051
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 167 KKEGAAGNPRVRPA-------------STGGLSLLPPPPGGKTSTLIPPPGEQLAV---- 209
K G+P+ RP+ S G + +P G+ S + P G +L+
Sbjct: 270 KDSTIGGSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIPVPQGTELSPSRPG 329
Query: 210 GGSLVQPAVAPS---SGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQ 255
GGS+ PS S +P+P AD+ G +S GS+S Q Q
Sbjct: 330 GGSMQTEPARPSNFLSASSPLPASAKGQQPADVTGHERQSEGSSSPQLQ 378
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 35.4 bits (80), Expect = 0.051
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 183 GGLSLLPPPPGGKTSTLIPPPGEQLAVGGS-LVQPAVAP--SSGGAPVPWPQPNP 234
GG PPPP +++ L PPG + GG+ L P P S G P P P+P
Sbjct: 486 GGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSP 540
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 35.0 bits (79), Expect = 0.067
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 172 AGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQ 231
A PR P S LS PPG + L P P + G + P G PWP
Sbjct: 270 AAPPRRPPQSASSLSASLRPPGAPATFLRPSPIPCSSPGPWQSLCGLGPPCAGC--PWPT 327
Query: 232 PNPATADIWGDFTKSTGSTSSQTQPGT 258
P +S G TS + PGT
Sbjct: 328 AGPG--------RRSPGGTSPERSPGT 346
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 34.7 bits (78), Expect = 0.087
Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Query: 142 PDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRPASTGGL----SLLPPPPG---G 194
P + L LG E + A AA P+ P S + PP G G
Sbjct: 967 PIEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPG 1026
Query: 195 KTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADIWGDFTKSTGST 250
S PP AVG L + A S AP WP+ +P + + G G T
Sbjct: 1027 FPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPGAGGAGGT 1082
>gi|4505959 POU domain, class 2, transcription factor 2 [Homo
sapiens]
Length = 463
Score = 34.7 bits (78), Expect = 0.087
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 170 GAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPW 229
G G P S+ PPPP ST P G A+G S + P+ P P P+
Sbjct: 402 GGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPY 461
>gi|118582284 msh homeobox 1 [Homo sapiens]
Length = 303
Score = 34.3 bits (77), Expect = 0.11
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 174 NPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPN 233
+P + P S L PG K S L P G Q A GGS V P S GAP P
Sbjct: 55 SPSLLPFSVEALMADHRKPGAKESALAPSEGVQ-AAGGSAQPLGVPPGSLGAPDAPSSPR 113
Query: 234 P 234
P
Sbjct: 114 P 114
>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 34.3 bits (77), Expect = 0.11
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 176 RVRPASTGGLSLLPPP--------PGGKTSTLI-----------PPPGEQLAVGGSLVQP 216
RVR GG++ PP P G + P P L + P
Sbjct: 73 RVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSP 132
Query: 217 AVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWV 261
+ PS +P P P P+PA W +T ++SS PGT V
Sbjct: 133 GIRPSPSPSPSPSPSPSPARGGRW-----TTCASSSPALPGTDGV 172
>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 34.3 bits (77), Expect = 0.11
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 176 RVRPASTGGLSLLPPP--------PGGKTSTLI-----------PPPGEQLAVGGSLVQP 216
RVR GG++ PP P G + P P L + P
Sbjct: 73 RVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSP 132
Query: 217 AVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWV 261
+ PS +P P P P+PA W +T ++SS PGT V
Sbjct: 133 GIRPSPSPSPSPSPSPSPARGGRW-----TTCASSSPALPGTDGV 172
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 34.3 bits (77), Expect = 0.11
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 176 RVRPASTGGLSLLPPP--------PGGKTSTLI-----------PPPGEQLAVGGSLVQP 216
RVR GG++ PP P G + P P L + P
Sbjct: 73 RVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSP 132
Query: 217 AVAPSSGGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWV 261
+ PS +P P P P+PA W +T ++SS PGT V
Sbjct: 133 GIRPSPSPSPSPSPSPSPARGGRW-----TTCASSSPALPGTDGV 172
>gi|116292174 fidgetin-like 2 [Homo sapiens]
Length = 653
Score = 34.3 bits (77), Expect = 0.11
Identities = 30/91 (32%), Positives = 35/91 (38%), Gaps = 21/91 (23%)
Query: 180 ASTGGLSLLPPPPGGKTSTLIPPPGE-------QLAVGGSLVQP---AVAPSSG------ 223
A TG + LPPPP PPPG GG QP A+ P G
Sbjct: 173 AQTG--AALPPPPPAALLQPPPPPGYGPSAPLYNYPAGGYAAQPGYGALPPPPGPPPAPY 230
Query: 224 ---GAPVPWPQPNPATADIWGDFTKSTGSTS 251
G P P P P PA +G T + G+ S
Sbjct: 231 LTPGLPAPTPLPAPAPPTAYGFPTAAPGAES 261
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,055,736
Number of Sequences: 37866
Number of extensions: 788432
Number of successful extensions: 4100
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 3243
Number of HSP's gapped (non-prelim): 953
length of query: 263
length of database: 18,247,518
effective HSP length: 100
effective length of query: 163
effective length of database: 14,460,918
effective search space: 2357129634
effective search space used: 2357129634
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.