Guide to the Human Genome
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Name: NECAP2 Sequence: fasta or formatted (273aa) NCBI GI: 223942032
Description:

NECAP endocytosis associated 2 isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [237aa] NECAP endocytosis associated 2 isoform 3
alt prot [263aa] NECAP endocytosis associated 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         26           2
 C cysteine            0.7          2           1
 D aspartate           5.5         15           1
 E glutamate           5.1         14           2
 F phenylalanine       4.4         12           1
 G glycine            10.3         28           2
 H histidine           1.5          4           1
 I isoleucine          3.7         10           1
 K lysine              5.5         15           3
 L leucine             7.7         21           2
 M methionine          1.1          3           1
 N asparagine          2.6          7           1
 P proline             8.8         24           4
 Q glutamine           6.6         18           2
 R arginine            5.9         16           2
 S serine              7.7         21           3
 T threonine           4.0         11           1
 V valine              6.2         17           1
 W tryptophan          1.5          4           1
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NECAP endocytosis associated 2 isoform 2 
NECAP2                0.814   NECAP endocytosis associated 2 isoform 1 
NECAP2                0.691   NECAP endocytosis associated 2 isoform 3 
NECAP1                0.544   NECAP endocytosis associated 1 
MARCH11               0.024   membrane-associated ring finger (C3HC4) 11 
WASF3                 0.023   WAS protein family, member 3 
NACA                  0.023   nascent polypeptide-associated complex alpha subuni...
FIP1L1                0.021   FIP1 like 1 isoform 2 
SYN1                  0.021   synapsin I isoform Ia 
SYN1                  0.021   synapsin I isoform Ib 
MAGEE1                0.019   melanoma antigen family E, 1 
DAAM1                 0.019   dishevelled-associated activator of morphogenesis 1 ...
DIAPH1                0.017   diaphanous 1 isoform 2 
DIAPH1                0.017   diaphanous 1 isoform 1 
WAS                   0.017   Wiskott-Aldrich syndrome protein 
FIP1L1                0.017   FIP1 like 1 isoform 3 
FIP1L1                0.017   FIP1 like 1 isoform 1 
ERF                   0.017   Ets2 repressor factor 
FMN1                  0.015   formin 1 
LOC100293254          0.015   PREDICTED: hypothetical protein 
LOC100289377          0.015   PREDICTED: hypothetical protein 
LOC100289377          0.015   PREDICTED: hypothetical protein XP_002343119 
PRAM1                 0.015   PML-RARA regulated adaptor molecule 1 
ASAP2                 0.015   ArfGAP with SH3 domain, ankyrin repeat and PH domain ...
C16orf86              0.015   hypothetical protein LOC388284 
HCFC1                 0.013   host cell factor 1 
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
USP43                 0.013   ubiquitin specific protease 43 
CIC                   0.013   capicua homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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