Guide to the Human Genome
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Name: NECAP2 Sequence: fasta or formatted (263aa) NCBI GI: 8922416
Description:

NECAP endocytosis associated 2 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [273aa] NECAP endocytosis associated 2 isoform 2
alt prot [237aa] NECAP endocytosis associated 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         23           2
 C cysteine            0.8          2           1
 D aspartate           5.3         14           1
 E glutamate           4.6         12           2
 F phenylalanine       4.6         12           1
 G glycine            11.4         30           2
 H histidine           0.8          2           1
 I isoleucine          4.2         11           1
 K lysine              5.3         14           3
 L leucine             5.7         15           2
 M methionine          1.1          3           1
 N asparagine          3.0          8           1
 P proline             9.5         25           4
 Q glutamine           6.8         18           2
 R arginine            5.3         14           2
 S serine              6.8         18           2
 T threonine           5.7         15           1
 V valine              6.1         16           1
 W tryptophan          2.3          6           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NECAP endocytosis associated 2 isoform 1 
NECAP2                0.875   NECAP endocytosis associated 2 isoform 3 
NECAP2                0.829   NECAP endocytosis associated 2 isoform 2 
NECAP1                0.608   NECAP endocytosis associated 1 
DIAPH1                0.031   diaphanous 1 isoform 2 
DIAPH1                0.031   diaphanous 1 isoform 1 
WAS                   0.031   Wiskott-Aldrich syndrome protein 
SMARCC2               0.029   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.029   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.029   SWI/SNF-related matrix-associated actin-dependent r...
BSN                   0.025   bassoon protein 
MEX3D                 0.025   ring finger and KH domain containing 1 
MAGEE1                0.023   melanoma antigen family E, 1 
LOC100293702          0.023   PREDICTED: hypothetical protein 
LOC100287504          0.023   PREDICTED: hypothetical protein 
LOC100287504          0.023   PREDICTED: hypothetical protein XP_002343166 
GGT6                  0.023   gamma-glutamyltransferase 6 isoform a 
NACA                  0.023   nascent polypeptide-associated complex alpha subuni...
FMN1                  0.021   formin 1 
DAAM1                 0.021   dishevelled-associated activator of morphogenesis 1 ...
CSF1                  0.019   colony stimulating factor 1 isoform b precursor [Hom...
BRSK1                 0.019   BR serine/threonine kinase 1 
LOC729991-MEF2B       0.019   myocyte enhancer factor 2B isoform b 
GRIN2D                0.019   N-methyl-D-aspartate receptor subunit 2D precursor ...
POU2F2                0.019   POU domain, class 2, transcription factor 2 
MSX1                  0.017   msh homeobox 1 
LOC729580             0.017   PREDICTED: hypothetical protein 
LOC729580             0.017   PREDICTED: hypothetical protein 
LOC729580             0.017   PREDICTED: hypothetical protein 
FIGNL2                0.017   fidgetin-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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