Guide to the Human Genome
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Name: NSUN5 Sequence: fasta or formatted (429aa) NCBI GI: 8922322
Description:

NOL1/NOP2/Sun domain family, member 5 isoform 2

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [466aa] NOL1/NOP2/Sun domain family, member 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         49           4
 C cysteine            2.6         11           2
 D aspartate           4.4         19           2
 E glutamate           5.1         22           2
 F phenylalanine       3.7         16           2
 G glycine             7.7         33           4
 H histidine           3.5         15           1
 I isoleucine          1.6          7           1
 K lysine              4.0         17           2
 L leucine            14.7         63           3
 M methionine          1.2          5           1
 N asparagine          1.9          8           1
 P proline             6.5         28           3
 Q glutamine           4.2         18           2
 R arginine            7.5         32           1
 S serine              7.5         32           2
 T threonine           2.8         12           2
 V valine              6.8         29           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo... 
NSUN5                 0.998   NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...
NSUN5C                0.490   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN5C                0.490   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN5C                0.416   NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...
NSUN5B                0.237   NOL1/NOP2/Sun domain family, member 5B 
NSUN5B                0.237   NOL1/NOP2/Sun domain family, member 5B 
NSUN5B                0.237   NOL1/NOP2/Sun domain family, member 5B 
NOP2                  0.098   nucleolar protein 1, 120kDa 
NOP2                  0.098   nucleolar protein 1, 120kDa 
NSUN7                 0.095   NOL1/NOP2/Sun domain family, member 7 
NSUN6                 0.060   NOL1/NOP2/Sun domain family, member 6 
NSUN2                 0.059   NOL1/NOP2/Sun domain family, member 2 
NSUN3                 0.032   NOL1/NOP2/Sun domain family, member 3 
NSUN4                 0.029   NOL1/NOP2/Sun domain family 4 protein 
LTBP2                 0.010   latent transforming growth factor beta binding protei...
TPRKB                 0.007   TP53RK binding protein 
NXPH4                 0.006   neurexophilin 4 
MESP2                 0.006   mesoderm posterior 2 homolog 
C10orf92              0.005   hypothetical protein LOC54777 
WEE1                  0.005   WEE1 tyrosine kinase isoform 1 
ZNF407                0.005   zinc finger protein 407 isoform 1 
CCDC88C               0.005   DVL-binding protein DAPLE 
ZCCHC14               0.005   zinc finger, CCHC domain containing 14 
NCDN                  0.005   neurochondrin isoform 2 
NCDN                  0.005   neurochondrin isoform 1 
NCDN                  0.005   neurochondrin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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