Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NSUN3 Sequence: fasta or formatted (340aa) NCBI GI: 11545785
Description:

NOL1/NOP2/Sun domain family, member 3

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         21           2
 C cysteine            3.5         12           1
 D aspartate           4.7         16           1
 E glutamate           5.0         17           1
 F phenylalanine       2.4          8           1
 G glycine             6.2         21           2
 H histidine           2.1          7           1
 I isoleucine          5.3         18           1
 K lysine              8.2         28           2
 L leucine            13.8         47           2
 M methionine          1.8          6           1
 N asparagine          3.8         13           1
 P proline             5.6         19           1
 Q glutamine           4.4         15           1
 R arginine            5.0         17           2
 S serine              8.5         29           2
 T threonine           3.5         12           1
 V valine              4.4         15           2
 W tryptophan          2.1          7           1
 Y tyrosine            3.5         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NOL1/NOP2/Sun domain family, member 3 
NSUN4                 0.220   NOL1/NOP2/Sun domain family 4 protein 
NSUN6                 0.076   NOL1/NOP2/Sun domain family, member 6 
NOP2                  0.076   nucleolar protein 1, 120kDa 
NOP2                  0.076   nucleolar protein 1, 120kDa 
NSUN2                 0.074   NOL1/NOP2/Sun domain family, member 2 
NSUN5                 0.040   NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...
NSUN5                 0.040   NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...
PAX8                  0.010   paired box 8 isoform PAX8D 
PAX8                  0.010   paired box 8 isoform PAX8E 
PAX8                  0.010   paired box 8 isoform PAX8C 
PAX8                  0.010   paired box 8 isoform PAX8B 
PAX8                  0.010   paired box 8 isoform PAX8A 
PAPOLB                0.010   poly(A) polymerase beta (testis specific) 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
RNH1                  0.007   ribonuclease/angiogenin inhibitor 
PRKCG                 0.004   protein kinase C, gamma 
NSUN5C                0.004   NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press