Guide to the Human Genome
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Name: NSUN6 Sequence: fasta or formatted (469aa) NCBI GI: 32698918
Description:

NOL1/NOP2/Sun domain family, member 6

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         33           2
 C cysteine            2.3         11           1
 D aspartate           4.5         21           1
 E glutamate           6.6         31           2
 F phenylalanine       4.7         22           2
 G glycine             7.0         33           2
 H histidine           1.9          9           1
 I isoleucine          5.3         25           1
 K lysine              7.9         37           2
 L leucine            11.9         56           3
 M methionine          2.6         12           1
 N asparagine          3.4         16           1
 P proline             6.4         30           2
 Q glutamine           5.5         26           2
 R arginine            3.8         18           2
 S serine              6.2         29           1
 T threonine           4.1         19           2
 V valine              6.8         32           1
 W tryptophan          0.4          2           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NOL1/NOP2/Sun domain family, member 6 
NOP2                  0.086   nucleolar protein 1, 120kDa 
NOP2                  0.086   nucleolar protein 1, 120kDa 
NSUN2                 0.063   NOL1/NOP2/Sun domain family, member 2 
NSUN3                 0.056   NOL1/NOP2/Sun domain family, member 3 
NSUN5                 0.055   NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...
NSUN5                 0.055   NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...
NSUN4                 0.047   NOL1/NOP2/Sun domain family 4 protein 
NSUN5C                0.021   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN5C                0.021   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN5C                0.020   NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...
METT5D1               0.011   methyltransferase 5 domain containing 1 isoform 1 [...
METT5D1               0.011   methyltransferase 5 domain containing 1 isoform 2 [...
TKT                   0.010   transketolase isoform 2 
TKT                   0.010   transketolase isoform 1 
TKT                   0.010   transketolase isoform 1 
LOC728475             0.008   PREDICTED: hypothetical protein 
LOC728475             0.008   PREDICTED: hypothetical protein 
LOC728475             0.008   PREDICTED: hypothetical protein 
ZSCAN20               0.007   zinc finger protein 31 
ATXN1L                0.005   ataxin 1-like 
TLK2                  0.004   tousled-like kinase 2 isoform B 
TLK2                  0.004   tousled-like kinase 2 isoform A 
TEKT5                 0.004   tektin 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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