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Name: KCNA3 Sequence: fasta or formatted (575aa) NCBI GI: 88758565
Description:

potassium voltage-gated channel, shaker-related subfamily, member 3

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         39           2
 C cysteine            2.1         12           2
 D aspartate           4.0         23           2
 E glutamate           7.3         42           3
 F phenylalanine       6.6         38           2
 G glycine             8.0         46           4
 H histidine           1.9         11           1
 I isoleucine          6.4         37           2
 K lysine              2.4         14           2
 L leucine             8.5         49           2
 M methionine          2.1         12           1
 N asparagine          3.3         19           3
 P proline             7.1         41           4
 Q glutamine           3.3         19           2
 R arginine            7.0         40           2
 S serine              8.5         49           3
 T threonine           4.9         28           2
 V valine              6.1         35           2
 W tryptophan          0.7          4           2
 Y tyrosine            3.0         17           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, shaker-related subf... 
KCNA2                 0.603   potassium voltage-gated channel, shaker-related subfa...
KCNA1                 0.597   potassium voltage-gated channel subfamily A member ...
KCNA4                 0.563   potassium voltage-gated channel, shaker-related subfa...
KCNA5                 0.536   potassium voltage-gated channel, shaker-related subf...
KCNA6                 0.534   potassium voltage-gated channel, shaker-related subfa...
KCNA7                 0.489   potassium voltage-gated channel, shaker-related subf...
KCNA10                0.484   potassium voltage-gated channel, shaker-related subfa...
KCND1                 0.222   potassium voltage-gated channel, Shal-related subfam...
KCNB2                 0.214   potassium voltage-gated channel, Shab-related subfam...
KCNB1                 0.213   potassium voltage-gated channel, Shab-related subfami...
KCNC1                 0.211   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.211   Shaw-related voltage-gated potassium channel protei...
KCND3                 0.209   potassium voltage-gated channel, Shal-related subfam...
KCND3                 0.209   potassium voltage-gated channel, Shal-related subfam...
KCND2                 0.208   potassium voltage-gated channel, Shal-related subfami...
KCNC4                 0.202   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.202   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.202   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.193   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.193   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.193   Shaw-related voltage-gated potassium channel protein...
KCNS1                 0.185   potassium voltage-gated channel delayed-rectifier pr...
KCNF1                 0.183   potassium voltage-gated channel, subfamily F, member...
KCNS3                 0.181   potassium voltage-gated channel delayed-rectifier pr...
KCNC3                 0.180   Shaw-related voltage-gated potassium channel protein...
KCNS2                 0.177   potassium voltage-gated channel, delayed-rectifier, ...
KCNG3                 0.166   potassium voltage-gated channel, subfamily G, member...
KCNG3                 0.161   potassium voltage-gated channel, subfamily G, member...
KCNG1                 0.161   potassium voltage-gated channel, subfamily G, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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