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Name: KCNC4 Sequence: fasta or formatted (582aa) NCBI GI: 24497464
Description:

Shaw-related voltage-gated potassium channel protein 4 isoform b

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [635aa] Shaw-related voltage-gated potassium channel protein 4 isoform a
alt prot [626aa] Shaw-related voltage-gated potassium channel protein 4 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         37           2
 C cysteine            2.7         16           2
 D aspartate           4.5         26           2
 E glutamate           6.9         40           3
 F phenylalanine       5.8         34           3
 G glycine            10.7         62           4
 H histidine           2.2         13           1
 I isoleucine          5.2         30           3
 K lysine              4.0         23           2
 L leucine             9.1         53           3
 M methionine          2.4         14           1
 N asparagine          2.4         14           2
 P proline             6.2         36           2
 Q glutamine           1.2          7           1
 R arginine            7.0         41           2
 S serine              6.0         35           2
 T threonine           5.8         34           2
 V valine              6.7         39           2
 W tryptophan          2.1         12           2
 Y tyrosine            2.7         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Shaw-related voltage-gated potassium channel protein... 
KCNC4                 0.914   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.914   Shaw-related voltage-gated potassium channel protein...
KCNC1                 0.614   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.612   Shaw-related voltage-gated potassium channel protei...
KCNC2                 0.603   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.603   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.603   Shaw-related voltage-gated potassium channel protein...
KCNC3                 0.582   Shaw-related voltage-gated potassium channel protein...
KCNB1                 0.231   potassium voltage-gated channel, Shab-related subfami...
KCNB2                 0.230   potassium voltage-gated channel, Shab-related subfam...
KCNA1                 0.208   potassium voltage-gated channel subfamily A member ...
KCND1                 0.202   potassium voltage-gated channel, Shal-related subfam...
KCNA7                 0.199   potassium voltage-gated channel, shaker-related subf...
KCNA4                 0.198   potassium voltage-gated channel, shaker-related subfa...
KCNA10                0.198   potassium voltage-gated channel, shaker-related subfa...
KCND2                 0.197   potassium voltage-gated channel, Shal-related subfami...
KCNA2                 0.197   potassium voltage-gated channel, shaker-related subfa...
KCNA3                 0.194   potassium voltage-gated channel, shaker-related subf...
KCNA6                 0.193   potassium voltage-gated channel, shaker-related subfa...
KCND3                 0.190   potassium voltage-gated channel, Shal-related subfam...
KCND3                 0.190   potassium voltage-gated channel, Shal-related subfam...
KCNA5                 0.186   potassium voltage-gated channel, shaker-related subf...
KCNS3                 0.182   potassium voltage-gated channel delayed-rectifier pr...
KCNV1                 0.181   potassium channel, subfamily V, member 1 
KCNF1                 0.178   potassium voltage-gated channel, subfamily F, member...
KCNS1                 0.174   potassium voltage-gated channel delayed-rectifier pr...
KCNG1                 0.161   potassium voltage-gated channel, subfamily G, member...
KCNS2                 0.159   potassium voltage-gated channel, delayed-rectifier, ...
KCNG3                 0.156   potassium voltage-gated channel, subfamily G, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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