Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 88702793
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88702793 slit-like 2 [Homo sapiens]
(673 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|88702793 slit-like 2 [Homo sapiens] 1360 0.0
gi|15029530 leucine rich repeat containing 4 [Homo sapiens] 140 3e-33
gi|122937309 leucine rich repeat containing 4B [Homo sapiens] 136 7e-32
gi|76880480 hypothetical protein LOC9865 [Homo sapiens] 133 5e-31
gi|51317373 netrin-G1 ligand [Homo sapiens] 132 1e-30
gi|194440719 chondroadherin-like [Homo sapiens] 130 5e-30
gi|27363458 leucine rich repeat and fibronectin type III domain ... 129 1e-29
gi|205277468 leucine rich repeat containing 15 isoform a [Homo s... 127 3e-29
gi|18677767 leucine rich repeat containing 15 isoform b [Homo sa... 127 3e-29
gi|30425563 reticulon 4 receptor-like 2 [Homo sapiens] 127 4e-29
gi|4758460 glycoprotein V (platelet) [Homo sapiens] 125 1e-28
gi|157426829 leucine rich repeat and Ig domain containing 3 [Hom... 124 4e-28
gi|7019381 fibronectin leucine rich transmembrane protein 2 [Hom... 120 4e-27
gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens] 120 4e-27
gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens] 120 4e-27
gi|198041768 synleurin [Homo sapiens] 119 9e-27
gi|52138725 leucine rich repeat and Ig domain containing 4 [Homo... 117 3e-26
gi|153251229 chondroadherin precursor [Homo sapiens] 115 1e-25
gi|122937470 carboxypeptidase N, polypeptide 2, 83kD [Homo sapiens] 112 1e-24
gi|229089140 leucine rich repeat containing 24 [Homo sapiens] 111 2e-24
gi|109809759 leucine rich repeat transmembrane neuronal 3 [Homo ... 108 1e-23
gi|38202222 fibronectin leucine rich transmembrane protein 3 pre... 108 1e-23
gi|7019383 fibronectin leucine rich transmembrane protein 3 prec... 108 1e-23
gi|13375646 leucine rich repeat and fibronectin type III domain ... 108 2e-23
gi|7662320 leucine-rich repeats and immunoglobulin-like domains ... 108 2e-23
gi|7662102 leucine rich repeat transmembrane neuronal 2 [Homo sa... 107 3e-23
gi|225579152 insulin-like growth factor binding protein, acid la... 107 5e-23
gi|4826772 insulin-like growth factor binding protein, acid labi... 107 5e-23
gi|153791507 leucine rich repeat neuronal 3 [Homo sapiens] 106 6e-23
gi|153792651 leucine rich repeat neuronal 3 [Homo sapiens] 106 6e-23
>gi|88702793 slit-like 2 [Homo sapiens]
Length = 673
Score = 1360 bits (3521), Expect = 0.0
Identities = 673/673 (100%), Positives = 673/673 (100%)
Query: 1 MCSRVPLLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVF 60
MCSRVPLLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVF
Sbjct: 1 MCSRVPLLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVF 60
Query: 61 ENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETF 120
ENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETF
Sbjct: 61 ENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETF 120
Query: 121 RGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLLDLSHNS 180
RGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLLDLSHNS
Sbjct: 121 RGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLLDLSHNS 180
Query: 181 LLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRG 240
LLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRG
Sbjct: 181 LLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRG 240
Query: 241 LTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPF 300
LTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPF
Sbjct: 241 LTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPF 300
Query: 301 NCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPT 360
NCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPT
Sbjct: 301 NCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPT 360
Query: 361 TRPVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDCPPSTCLNGGTC 420
TRPVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDCPPSTCLNGGTC
Sbjct: 361 TRPVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDCPPSTCLNGGTC 420
Query: 421 HLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLTLGIEPVSPTSLRVGL 480
HLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLTLGIEPVSPTSLRVGL
Sbjct: 421 HLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLTLGIEPVSPTSLRVGL 480
Query: 481 QRYLQGSSVQLRSLRLTYRNLSGPDKRLVTLRLPASLAEYTVTQLRPNATYSVCVMPLGP 540
QRYLQGSSVQLRSLRLTYRNLSGPDKRLVTLRLPASLAEYTVTQLRPNATYSVCVMPLGP
Sbjct: 481 QRYLQGSSVQLRSLRLTYRNLSGPDKRLVTLRLPASLAEYTVTQLRPNATYSVCVMPLGP 540
Query: 541 GRVPEGEEACGEAHTPPAVHSNHAPVTQAREGNLPLLIAPALAAVLLAALAAVGAAYCVR 600
GRVPEGEEACGEAHTPPAVHSNHAPVTQAREGNLPLLIAPALAAVLLAALAAVGAAYCVR
Sbjct: 541 GRVPEGEEACGEAHTPPAVHSNHAPVTQAREGNLPLLIAPALAAVLLAALAAVGAAYCVR 600
Query: 601 RGRAMAAAAQDKGQVGPGAGPLELEGVKVPLEPGPKATEGGGEALPSGSECEVPLMGFPG 660
RGRAMAAAAQDKGQVGPGAGPLELEGVKVPLEPGPKATEGGGEALPSGSECEVPLMGFPG
Sbjct: 601 RGRAMAAAAQDKGQVGPGAGPLELEGVKVPLEPGPKATEGGGEALPSGSECEVPLMGFPG 660
Query: 661 PGLQSPLHAKPYI 673
PGLQSPLHAKPYI
Sbjct: 661 PGLQSPLHAKPYI 673
>gi|15029530 leucine rich repeat containing 4 [Homo sapiens]
Length = 653
Score = 140 bits (354), Expect = 3e-33
Identities = 110/348 (31%), Positives = 163/348 (46%), Gaps = 29/348 (8%)
Query: 8 LLPLLLLLALGPGVQGCPSGCQCS-QPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITM 66
+L + A G Q CPS C CS Q V CT R + VP+ +P +T L + EN I M
Sbjct: 30 ILCAAIAAAASAGPQNCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQM 89
Query: 67 LDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRL 126
+ A +F L L++L L +N I + G F LA+L+ L+L N L I + F L +L
Sbjct: 90 IQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKL 149
Query: 127 ERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLLDLSHNSLLAL-- 184
L+L N I I AF+ R+P L+ LDL L
Sbjct: 150 RELWLRNNPIESIPSYAFN---------------------RVPSLMRLDLGELKKLEYIS 188
Query: 185 EPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERV-PPVIRGLRGLTR 243
E N++ L L ++ + + L L +L++S N + P GL L +
Sbjct: 189 EGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKK 246
Query: 244 LRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCV 303
L + N++++ + GLA+L EL++++ +L +LP DL L L NP+NC
Sbjct: 247 LWVM-NSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305
Query: 304 CPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPA 351
C + W W+RE ++ S RCH P GR L+E+D A F C A
Sbjct: 306 CDILWLAWWLRE-YIPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCSA 352
>gi|122937309 leucine rich repeat containing 4B [Homo sapiens]
Length = 713
Score = 136 bits (342), Expect = 7e-32
Identities = 116/372 (31%), Positives = 174/372 (46%), Gaps = 52/372 (13%)
Query: 19 PGVQGCPSGCQCS-QPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAGSFAGLPG 77
P CP C CS Q V CT R VP +P +T L + ENGI ++ +F L
Sbjct: 52 PPATSCPVACSCSNQASRVICTRRDLAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRH 111
Query: 78 LQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIR 137
L++L LS+N + + G F L +L+ L+L NRL + + F L +L L+L N I
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 138 HIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLLDLSHNSLLALEPGILDTANVEAL 197
I AF+ + L L L + L L + S A E G+++ L
Sbjct: 172 SIPSYAFNRVPSLRRLDLGE---------------LKRLEYISEAAFE-GLVN------L 209
Query: 198 RLAGLGLQQL-DEGLFSRLRNLHDLDVSDNQLERVPP-VIRGLRGLTRLRLAGNTRIAQL 255
R LG+ L D + L L +L++S N+L+ + P +GL L +L L + ++A +
Sbjct: 210 RYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM-HAQVATI 268
Query: 256 RPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPLSWFGPWVRE 315
L +L+EL++S+ +L +LP DL RL + NP++C C + W W++E
Sbjct: 269 ERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKE 328
Query: 316 ---SHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPTTRPVVREPTALS 372
S+ T + RCH P GR + ELD + F C A PV+ EP
Sbjct: 329 TVPSNTTCCA----RCHAPAGLKGRYIGELDQSHFTCYA-----------PVIVEP---- 369
Query: 373 SSLAPTWLSPTE 384
PT L+ TE
Sbjct: 370 ----PTDLNVTE 377
>gi|76880480 hypothetical protein LOC9865 [Homo sapiens]
Length = 811
Score = 133 bits (335), Expect = 5e-31
Identities = 135/456 (29%), Positives = 180/456 (39%), Gaps = 79/456 (17%)
Query: 7 LLLPLLLLLALGPGVQG-CPSGCQCSQPQTVFCTARQGTTVPRDV----PPDTVGLYVFE 61
LLL + LAL P + CP C C PQ + CT R VP+ P D + +
Sbjct: 9 LLLVVCGCLALPPLAEPVCPERCDCQHPQHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGG 68
Query: 62 NGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFR 121
N IT + A F L L+ LDL NQI SL F+ L+ L L L N L + T
Sbjct: 69 NFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLA 128
Query: 122 GLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALP-----PL---------- 166
LR+L LY N I + G+F+ L+ L++L+L N L ALP PL
Sbjct: 129 PLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLES 188
Query: 167 ------------RLPRLLLLDLSHNSLLALEPGILDTANVEALR------LAGLGLQQLD 208
+L +L L+LS N L+P + A LR L+ LQ L
Sbjct: 189 NRIRFLGKNAFAQLGKLRFLNLSANE---LQPSLRHAATFAPLRSLSSLILSANNLQHLG 245
Query: 209 EGLFSRLRNLHDLDVSDNQLERV-PPVIRGLRGLTRLRLAGN------------------ 249
+F L L L + NQL + P GL L LRL GN
Sbjct: 246 PRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEA 305
Query: 250 -----TRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVC 304
++ L P L L+EL + N +L AL GD+ P L L N + C C
Sbjct: 306 LDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASPALYRLDLDGNGWTCDC 365
Query: 305 PL----SWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELD---YADFGCPATTTTAT 357
L W G W + + +C PP G+ L LD + C + +A+
Sbjct: 366 RLRGLKRWMGDWHSQGRLLTVF---VQCRHPPALRGKYLDYLDDQQLQNGSCADPSPSAS 422
Query: 358 VPTTRPVVREPTALSSSLAPTWLSPTEPATEAPSPP 393
+ R PTA + P P A E P P
Sbjct: 423 LTADRRRQPLPTAAGEEMTP----PAGLAEELPPQP 454
>gi|51317373 netrin-G1 ligand [Homo sapiens]
Length = 640
Score = 132 bits (332), Expect = 1e-30
Identities = 116/373 (31%), Positives = 169/373 (45%), Gaps = 49/373 (13%)
Query: 7 LLLPLLLLLALG-PGVQGCPSGCQCS-QPQTVFCTARQGTTVPRDVPPDTVGLYVFENGI 64
+LL L LL+ G Q CPS C CS Q V C + VP + +T L + EN I
Sbjct: 29 VLLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQI 88
Query: 65 TMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLR 124
++ SF L L++L LS+N I ++ G F LANL+ L+L NRL I N F L
Sbjct: 89 QIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLS 148
Query: 125 RLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLLDLSHNSLLAL 184
+L+ L+L N I I AF+ R+P L LDL L+
Sbjct: 149 KLKELWLRNNPIESIPSYAFN---------------------RIPSLRRLDLGELKRLSY 187
Query: 185 --EPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP-VIRGLRGL 241
E +N+ L LA L+++ + L L +LD+S N L + P +GL L
Sbjct: 188 ISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHL 245
Query: 242 TRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFN 301
+L + ++I + L +L E+++++ +L LP DL L + NP+N
Sbjct: 246 QKLWMI-QSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 304
Query: 302 CVCPLSWFGPWVRESHVTLASPEET----RCHFPPKNAGRLLLELDYADFGCPATTTTAT 357
C C + W W+++ +P T RC+ PP GR + ELD F C A
Sbjct: 305 CNCDILWLSWWIKD-----MAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYA------ 353
Query: 358 VPTTRPVVREPTA 370
PV+ EP A
Sbjct: 354 -----PVIVEPPA 361
>gi|194440719 chondroadherin-like [Homo sapiens]
Length = 762
Score = 130 bits (326), Expect = 5e-30
Identities = 132/423 (31%), Positives = 173/423 (40%), Gaps = 36/423 (8%)
Query: 3 SRVPLLLPLLLLLALGPG----VQGCPSGCQCSQPQT-VFCTARQGTTVPRDVPPDTVGL 57
+ VPL+LPLL+LL L P Q CP C C + V C + T VP +P T L
Sbjct: 8 THVPLVLPLLVLLLLAPARQAAAQRCPQACICDNSRRHVACRYQNLTEVPDAIPELTQRL 67
Query: 58 YVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITN 117
+ N + ++ A +F G+P L LDL ++ + G F+ L L L+L +N L E+
Sbjct: 68 DLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQ 127
Query: 118 ETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLR---LPRLLLL 174
E GL L RL L N + ++PG F L L L L N L LP + L R+ L
Sbjct: 128 EALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWL 187
Query: 175 DLSHNSLLALEPGILDTANVEALRLAGL---GLQQLDEGLFSRLRNLHDLDVSDNQLERV 231
LSHN+L L P L A + ALR L LQ L + S+ R L L++ N L
Sbjct: 188 RLSHNALSVLAPEAL--AGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYA 245
Query: 232 PPVI-RGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRL 290
L GL L L G + L P A L LD+ L LP L G +L
Sbjct: 246 GEEDGLALPGLRELLLDGGA-LQALGPRAFAHCPRLHTLDLRGNQLDTLP-PLQGP-GQL 302
Query: 291 RLLAAARNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCP 350
R L NP C C W+ + V + C P + G L L D CP
Sbjct: 303 RRLRLQGNPLWCGCQARPLLEWLARARVR----SDGACQGPRRLRGEALDALRPWDLRCP 358
Query: 351 ATTTTATVPTTRPVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDCP 410
E A++ AP P P E V P P+ C
Sbjct: 359 GDAAQEEEEL------EERAVAGPRAPPRGPPRGPGEER---------AVAPCPRACVCV 403
Query: 411 PST 413
P +
Sbjct: 404 PES 406
Score = 101 bits (252), Expect = 2e-21
Identities = 108/366 (29%), Positives = 151/366 (41%), Gaps = 27/366 (7%)
Query: 18 GPG----VQGCPSGCQC-SQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAGSF 72
GPG V CP C C + + C VPR P DT L + N + +F
Sbjct: 386 GPGEERAVAPCPRACVCVPESRHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAF 445
Query: 73 AGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLG 132
GL L L L IA L +G L L L L+ N+L ++ G RL LYL
Sbjct: 446 PGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLE 505
Query: 133 KNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPR---LLLLDLSHNSLLALEPGIL 189
+NR + A L L L LQDN + L P L R L + LS N + + G L
Sbjct: 506 RNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGAL 565
Query: 190 DTA-NVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERV-----PPVIRGLRGLTR 243
A +E L L L+++ G L L +L +S N L + PV R L+ L
Sbjct: 566 GPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHL-- 623
Query: 244 LRLAGNTRIAQLRPEDLAGLA-ALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNC 302
++ + Q+ P +GL LQ L + L+ALP S +L L+ + NPF+C
Sbjct: 624 --FLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPALPS--LSQLELIDLSSNPFHC 679
Query: 303 VCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCP--ATTTTATVPT 360
C L W+ ++ + + C PP G+ + CP A P
Sbjct: 680 DCQLLPLHRWLTGLNLRVGA----TCATPPNARGQRVKAAAAVFEDCPGWAARKAKRTPA 735
Query: 361 TRPVVR 366
+RP R
Sbjct: 736 SRPSAR 741
>gi|27363458 leucine rich repeat and fibronectin type III domain
containing 4 [Homo sapiens]
Length = 635
Score = 129 bits (323), Expect = 1e-29
Identities = 176/673 (26%), Positives = 246/673 (36%), Gaps = 148/673 (21%)
Query: 8 LLPLLLLLALGPGVQGCPSGCQC---SQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGI 64
+ P LLLL L G CP C C S+ + C R VP +V TV L + +N I
Sbjct: 1 MAPPLLLLLLASGAAACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFI 60
Query: 65 TMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLR 124
L F + GL L LS+N I + + F L +L +L L NRL E+ + RG
Sbjct: 61 QALGPPDFRNMTGLVDLTLSRNAITRIGARAFGDLESLRSLHLDGNRLVELGTGSLRGPV 120
Query: 125 RLERLYLGKNRIRHIQPGAFDT-LDRLLELKLQDNELRALPPL---RLPRLLLLDLSHNS 180
L+ L L N++ I PGAFD L+ L +L L N LR +P +P L L+L HN
Sbjct: 121 NLQHLILSGNQLGRIAPGAFDDFLESLEDLDLSYNNLRQVPWAGIGAMPALHTLNLDHNL 180
Query: 181 LLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRG 240
+ AL P G F++L L LD++ N+L + P RG
Sbjct: 181 IDALPP-----------------------GAFAQLGQLSRLDLTSNRLATLAPDPLFSRG 217
Query: 241 LTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPF 300
R A+ P L +L+ + NP
Sbjct: 218 ----------RDAEASPAPL-------------------------------VLSFSGNPL 236
Query: 301 NCVCPLSWFGPWVRESHVTLASPEETR-CHFPPKNAGRLLLELDYADFGCPATTTTATVP 359
+C C L W LA P++ C PP AGR + +F C
Sbjct: 237 HCNCELLWLR--------RLARPDDLETCASPPGLAGRYFWAVPEGEFSC---------- 278
Query: 360 TTRPVVREPTALSSSLAPTWLSPTEPAT---EAPSPPSTAPPTVGPVPQ------PQDCP 410
EP ++ W+ + AT A P+ VGP +
Sbjct: 279 -------EPPLIARHTQRLWVLEGQRATLRCRALGDPAPTMHWVGPDDRLVGNSSRARAF 331
Query: 411 PSTCLNGGTCHLGTRHHLACLC--PEGFTGLYCE----------SQMGQGTRPSPTPVTP 458
P+ L G G C+ P G E + +G RP P+ +
Sbjct: 332 PNGTLEIGVTGAGDAGGYTCIATNPAGEATARVELRVLALPHGGNSSAEGGRPGPSDIAA 391
Query: 459 RPPRSL----TLGIEP---VSPTSLRVGLQRYLQGSSVQ-LRSLRLTYRNLSGPDKRLVT 510
+ TL EP V+ + GL + G + ++ Y S D+ L+
Sbjct: 392 SARTAAEGEGTLESEPAVQVTEVTATSGLVSWGPGRPADPVWMFQIQYN--SSEDETLIY 449
Query: 511 LRLPASLAEYTVTQLRPNATYSVCVMPLGPGRVPEGEEA-----CGEAHTPPAVHSNHAP 565
+PAS + + L P A Y +C++ L P P A C T PA HA
Sbjct: 450 RIVPASSHHFLLKHLVPGADYDLCLLALSPAAGPSDLTATRLLGCAHFSTLPASPLCHAL 509
Query: 566 VTQAREGNLPLLIAPALAAVLLAALAAVGAAYCVRRGRAMAAAAQDKGQVGPGAGPLELE 625
G L + A+ VL+AAL A V RGR G G PL+L
Sbjct: 510 QAHVLGGTLTV----AVGGVLVAALLVFTVALLV-RGRG----------AGNGRLPLKLS 554
Query: 626 GVKVPLEPGPKAT 638
V+ GP T
Sbjct: 555 HVQSQTNGGPSPT 567
>gi|205277468 leucine rich repeat containing 15 isoform a [Homo
sapiens]
Length = 587
Score = 127 bits (320), Expect = 3e-29
Identities = 99/299 (33%), Positives = 141/299 (47%), Gaps = 11/299 (3%)
Query: 5 VPLLLPLLLLL---ALGPGV--QGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYV 59
+PL LLLL+ A G G+ GCPS C CS+ V CT + VP +P + + L +
Sbjct: 7 MPLKHYLLLLVGCQAWGAGLAYHGCPSECTCSRASQVECTGARIVAVPTPLPWNAMSLQI 66
Query: 60 FENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNET 119
IT L+ F + L L + +N+++ + G F+ L +L L L N+L +
Sbjct: 67 LNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGL 126
Query: 120 FRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDL 176
F+GL LE L L N++ IQP F L EL+L N L +P L L L+L
Sbjct: 127 FQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNL 186
Query: 177 SHNSLLALEPGILD-TANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP-V 234
NSL + P + N++ LRL L + G F L NL +L + NQ+ + P +
Sbjct: 187 GKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGL 246
Query: 235 IRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLL 293
L RL L+ N I+QL P L L L + SL+ L + G P LR L
Sbjct: 247 FHNNHNLQRLYLS-NNHISQLPPSIFMQLPQLNRLTLFGNSLKELSLGIFGPMPNLREL 304
Score = 100 bits (248), Expect = 6e-21
Identities = 101/365 (27%), Positives = 155/365 (42%), Gaps = 44/365 (12%)
Query: 57 LYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEIT 116
L ++EN +T + G+F GL LQ L L QNQI L G+F NL L L+ N + ++
Sbjct: 208 LRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLP 267
Query: 117 NETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLL 173
F L +L RL L N ++ + G F + L EL L DN + +LP L +L +
Sbjct: 268 PSIFMQLPQLNRLTLFGNSLKELSLGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV 327
Query: 174 LDLSHNSLLALEPGILD-TANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVP 232
L LS N + + PG + + L L LQ LD +F L NL ++ + +N+L ++P
Sbjct: 328 LILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLP 387
Query: 233 PVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRL 292
GN A + L + + N L+ LP G+F L
Sbjct: 388 ---------------GNI---------FANVNGLMAIQLQNNQLENLP---LGIFDHLGK 420
Query: 293 LAAAR---NPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADF-- 347
L R NP+ C + W+ + L + C P G+ L+ ++
Sbjct: 421 LCELRLYDNPWRCDSDILPLRNWLLLNQPRLGTDTVPVCFSPANVRGQSLIIINVNVAVP 480
Query: 348 -----GCPATTTTATVPTTRPVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGP 402
P+ T P T P + T++SS+ T SP E T+ + T +V
Sbjct: 481 SVHVPEVPSYPETPWYPDT-PSYPDTTSVSSTTELT--SPVEDYTDLTTIQVTDDRSVWG 537
Query: 403 VPQPQ 407
+ Q Q
Sbjct: 538 MTQAQ 542
Score = 72.0 bits (175), Expect = 2e-12
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 52 PDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANR 111
P+ L++++N I+ L F+ L LQ+L LS+NQI+ + G F L L L L N
Sbjct: 299 PNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNA 358
Query: 112 LHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALP 164
L ++ FR L L+ + L NR+R + F ++ L+ ++LQ+N+L LP
Sbjct: 359 LQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLP 411
Score = 70.9 bits (172), Expect = 4e-12
Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 52 PDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANR 111
P L +F N + L G F +P L+ L L N I+SLP VF L L L L+ N+
Sbjct: 275 PQLNRLTLFGNSLKELSLGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQ 334
Query: 112 LHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRL 168
+ I+ F GL L L L N ++ + F L L + LQ+N LR LP +
Sbjct: 335 ISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANV 394
Query: 169 PRLLLLDLSHNSLLALEPGILD 190
L+ + L +N L L GI D
Sbjct: 395 NGLMAIQLQNNQLENLPLGIFD 416
>gi|18677767 leucine rich repeat containing 15 isoform b [Homo
sapiens]
Length = 581
Score = 127 bits (320), Expect = 3e-29
Identities = 99/299 (33%), Positives = 141/299 (47%), Gaps = 11/299 (3%)
Query: 5 VPLLLPLLLLL---ALGPGV--QGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYV 59
+PL LLLL+ A G G+ GCPS C CS+ V CT + VP +P + + L +
Sbjct: 1 MPLKHYLLLLVGCQAWGAGLAYHGCPSECTCSRASQVECTGARIVAVPTPLPWNAMSLQI 60
Query: 60 FENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNET 119
IT L+ F + L L + +N+++ + G F+ L +L L L N+L +
Sbjct: 61 LNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGL 120
Query: 120 FRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDL 176
F+GL LE L L N++ IQP F L EL+L N L +P L L L+L
Sbjct: 121 FQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNL 180
Query: 177 SHNSLLALEPGILD-TANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP-V 234
NSL + P + N++ LRL L + G F L NL +L + NQ+ + P +
Sbjct: 181 GKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGL 240
Query: 235 IRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLL 293
L RL L+ N I+QL P L L L + SL+ L + G P LR L
Sbjct: 241 FHNNHNLQRLYLS-NNHISQLPPSIFMQLPQLNRLTLFGNSLKELSLGIFGPMPNLREL 298
Score = 100 bits (248), Expect = 6e-21
Identities = 101/365 (27%), Positives = 155/365 (42%), Gaps = 44/365 (12%)
Query: 57 LYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEIT 116
L ++EN +T + G+F GL LQ L L QNQI L G+F NL L L+ N + ++
Sbjct: 202 LRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLP 261
Query: 117 NETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLL 173
F L +L RL L N ++ + G F + L EL L DN + +LP L +L +
Sbjct: 262 PSIFMQLPQLNRLTLFGNSLKELSLGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV 321
Query: 174 LDLSHNSLLALEPGILD-TANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVP 232
L LS N + + PG + + L L LQ LD +F L NL ++ + +N+L ++P
Sbjct: 322 LILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLP 381
Query: 233 PVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRL 292
GN A + L + + N L+ LP G+F L
Sbjct: 382 ---------------GNI---------FANVNGLMAIQLQNNQLENLP---LGIFDHLGK 414
Query: 293 LAAAR---NPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADF-- 347
L R NP+ C + W+ + L + C P G+ L+ ++
Sbjct: 415 LCELRLYDNPWRCDSDILPLRNWLLLNQPRLGTDTVPVCFSPANVRGQSLIIINVNVAVP 474
Query: 348 -----GCPATTTTATVPTTRPVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGP 402
P+ T P T P + T++SS+ T SP E T+ + T +V
Sbjct: 475 SVHVPEVPSYPETPWYPDT-PSYPDTTSVSSTTELT--SPVEDYTDLTTIQVTDDRSVWG 531
Query: 403 VPQPQ 407
+ Q Q
Sbjct: 532 MTQAQ 536
Score = 72.0 bits (175), Expect = 2e-12
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 52 PDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANR 111
P+ L++++N I+ L F+ L LQ+L LS+NQI+ + G F L L L L N
Sbjct: 293 PNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNA 352
Query: 112 LHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALP 164
L ++ FR L L+ + L NR+R + F ++ L+ ++LQ+N+L LP
Sbjct: 353 LQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLP 405
Score = 70.9 bits (172), Expect = 4e-12
Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 52 PDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANR 111
P L +F N + L G F +P L+ L L N I+SLP VF L L L L+ N+
Sbjct: 269 PQLNRLTLFGNSLKELSLGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQ 328
Query: 112 LHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRL 168
+ I+ F GL L L L N ++ + F L L + LQ+N LR LP +
Sbjct: 329 ISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANV 388
Query: 169 PRLLLLDLSHNSLLALEPGILD 190
L+ + L +N L L GI D
Sbjct: 389 NGLMAIQLQNNQLENLPLGIFD 410
>gi|30425563 reticulon 4 receptor-like 2 [Homo sapiens]
Length = 420
Score = 127 bits (318), Expect = 4e-29
Identities = 124/384 (32%), Positives = 161/384 (41%), Gaps = 62/384 (16%)
Query: 11 LLLLLALGPGVQGCPSGCQC-SQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDA 69
LL+LLAL CP C C S P TV C A ++VP +PP T L++ N I L
Sbjct: 18 LLMLLALPLAAPSCPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRTLRP 77
Query: 70 GSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERL 129
G+F +NL L L +N L I TFR L+ LE L
Sbjct: 78 GTFG--------------------------SNLLTLWLFSNNLSTIYPGTFRHLQALEEL 111
Query: 130 YLGKNR-IRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSHNSLLALE 185
LG NR +R ++P F L+RL L L +L +LP L L L L NSLL L+
Sbjct: 112 DLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQ 171
Query: 186 PGIL-DTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRGLTRL 244
+ D AN+ L L G L+ L E +F RGL L RL
Sbjct: 172 DDLFADLANLSHLFLHGNRLRLLTEHVF-----------------------RGLGSLDRL 208
Query: 245 RLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVC 304
L GN R+ + GL+ L L + N SL +LPG+ P L L NP+ C C
Sbjct: 209 LLHGN-RLQGVHRAAFRGLSRLTILYLFNNSLASLPGEALADLPSLEFLRLNANPWACDC 267
Query: 305 PLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADF-GCPATTTTATVPTTRP 363
W + + V S + C PP+ GR L L ADF CP T P +R
Sbjct: 268 RARPLWAWFQRARV---SSSDVTCATPPERQGRDLRALREADFQACPPAAPTR--PGSRA 322
Query: 364 VVREPTALSSSLAPTWLSPTEPAT 387
+ +A P +P+T
Sbjct: 323 RGNSSSNHLYGVAEAGAPPADPST 346
>gi|4758460 glycoprotein V (platelet) [Homo sapiens]
Length = 560
Score = 125 bits (314), Expect = 1e-28
Identities = 114/373 (30%), Positives = 153/373 (41%), Gaps = 55/373 (14%)
Query: 61 ENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETF 120
+N + L A F L L+LLDLS N + LP G+ A L L L +NRL + +
Sbjct: 155 QNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLL 214
Query: 121 RGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLS 177
L L L +N IR I PGAFD L L L L N L LP L L LL L
Sbjct: 215 NSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLF 274
Query: 178 HNSLLALEPGIL-----------------------DTANVEALRLAGL----GLQQLDEG 210
N L L PG+L N+ LR G+ L L +G
Sbjct: 275 ENPLAEL-PGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQG 333
Query: 211 LFSRLRNLHDLDVSDNQLERVPP-VIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQEL 269
F L L L + N L +P ++RGL L ++ L N R+ L L++L+ +
Sbjct: 334 AFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRN-RLRALPRALFRNLSSLESV 392
Query: 270 DVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPLSWFGPWVRESHVTLASPEETRCH 329
+ + L+ LPGD+ G PRL + N + C C L F W+R+ + E RC
Sbjct: 393 QLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCDCGLGPFLGWLRQHLGLVGGEEPPRCA 452
Query: 330 FPPKNAGRLLLELDYADFGCPATTTTATVPTTRPVVREPTALSSSLAPTWLSPTEPATEA 389
P +AG L L D CP P RP + ++EA
Sbjct: 453 GPGAHAGLPLWALPGGDAECPGPRG----PPPRPA------------------ADSSSEA 490
Query: 390 PSPPSTAPPTVGP 402
P P+ AP + P
Sbjct: 491 PVHPALAPNSSEP 503
Score = 99.4 bits (246), Expect = 1e-20
Identities = 98/326 (30%), Positives = 137/326 (42%), Gaps = 33/326 (10%)
Query: 4 RVPLLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPR-DVPPDTVGLYVFEN 62
R LL +L LL P CP C+C C+ + +P + + +F
Sbjct: 3 RGTLLCAVLGLLRAQPFP--CPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFGM 60
Query: 63 GITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRG 122
G +L + SF+G+ LQ L +S + I+++ G F L L L L+ N++ +
Sbjct: 61 GRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDK 120
Query: 123 LRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSHN 179
+ LE+L+L N +R I F L L EL L N+L LP L L LLDLS N
Sbjct: 121 MVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGN 180
Query: 180 SLLALEPGILDT-ANVEALRLAGLGLQQLDEGL------------------------FSR 214
+L L G+L A +E L L L LD GL F R
Sbjct: 181 NLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDR 240
Query: 215 LRNLHDLDVSDNQLERVPPVI-RGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSN 273
L NL L +S N L +P + LT L L N +A+L + LQEL ++
Sbjct: 241 LPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENP-LAELPGVLFGEMGGLQELWLNR 299
Query: 274 LSLQALPGDLSGLFPRLRLLAAARNP 299
L+ LP RLR L +P
Sbjct: 300 TQLRTLPAAAFRNLSRLRYLGVTLSP 325
Score = 50.4 bits (119), Expect = 5e-06
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 57 LYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEIT 116
L + NG+T L G GL L+ + L +N++ +LP +F+ L++L ++ L N+L +
Sbjct: 344 LALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLP 403
Query: 117 NETFRGLRRLERLYLGKNRIR 137
+ F L RL + LG N R
Sbjct: 404 GDVFGALPRLTEVLLGHNSWR 424
>gi|157426829 leucine rich repeat and Ig domain containing 3 [Homo
sapiens]
Length = 592
Score = 124 bits (310), Expect = 4e-28
Identities = 117/362 (32%), Positives = 154/362 (42%), Gaps = 57/362 (15%)
Query: 2 CSRVPLLLPLLLLLALGPGVQGCPSGCQCS-QPQTVFCTARQGTTVPRDVPPDTVGLYVF 60
C L LPLLLL A P GCP+ C+C+ Q + V CT R+ T VP +P +T L +
Sbjct: 3 CWLCVLSLPLLLLPAAPPPAGGCPARCECTVQTRAVACTRRRLTAVPDGIPAETRLLELS 62
Query: 61 ENGITMLDAGSFAGLPGLQLLDLSQNQIAS------------------------LPSGVF 96
N I L+ G A LP L+ LDLS+N IA +P GVF
Sbjct: 63 RNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVF 122
Query: 97 QPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQ 156
L NL+ LDL+ N+L + + TF+ L L RL +G N + + AF L L EL L+
Sbjct: 123 TRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLE 182
Query: 157 D-----------NELRALPPLRLPRLLLLDLSHNSLLALEPGILD--------TANVEAL 197
LR+L LRL L + L + L PG+L V A
Sbjct: 183 RCNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRL-PGLLHLEIDNWPLLEEVAAG 241
Query: 198 RLAGLGLQQLD----------EGLFSRLRNLHDLDVSDNQLERVP-PVIRGLRGLTRLRL 246
L GL L L +L L++S N + VP R L L L L
Sbjct: 242 SLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHL 301
Query: 247 AGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPL 306
AG +A + P+ GL ++ L++SN L L L L NP C C L
Sbjct: 302 AG-ALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRL 360
Query: 307 SW 308
W
Sbjct: 361 LW 362
>gi|7019381 fibronectin leucine rich transmembrane protein 2 [Homo
sapiens]
Length = 660
Score = 120 bits (301), Expect = 4e-27
Identities = 155/601 (25%), Positives = 245/601 (40%), Gaps = 99/601 (16%)
Query: 24 CPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLLD- 82
CPS C+C + V+C R T+VP +P LY+ N I +AG A L +Q +
Sbjct: 36 CPSVCRCDR-NFVYCNERSLTSVPLGIPEGVTVLYLHNNQIN--NAGFPAELHNVQSVHT 92
Query: 83 --LSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIRHI- 139
L NQ+ P + + N+ L L N + I+ L +LE L+L N I +
Sbjct: 93 VYLYGNQLDEFPMNLPK---NVRVLHLQENNIQTISRAALAQLLKLEELHLDDNSISTVG 149
Query: 140 -QPGAFDTLDRLLELKLQDNELRALP---PLRLPRL--------LLLDLSHNSLLALEPG 187
+ GAF L L L N L ++P P+ L L ++ D++ +L +LE
Sbjct: 150 VEDGAFREAISLKLLFLSKNHLSSVPVGLPVDLQELRVDENRIAVISDMAFQNLTSLERL 209
Query: 188 ILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRGLTRLRLA 247
I+D N+ L + + EG FS L L + + N L PP + G L RL L
Sbjct: 210 IVD-GNL-------LTNKGIAEGTFSHLTKLKEFSIVRNSLSHPPPDLPGTH-LIRLYLQ 260
Query: 248 GNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPLS 307
N +I + + L L+ LD+SN L+ L + L+ L A NP+ C C +
Sbjct: 261 DN-QINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLSNLKQLTARNNPWFCDCSIK 319
Query: 308 WFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPTTRPVVRE 367
W W++ +L + C P + G + EL+ CP TTT +P P
Sbjct: 320 WVTEWLKYIPSSL-NVRGFMCQGPEQVRGMAVRELNMNLLSCP--TTTPGLPLFTP---- 372
Query: 368 PTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVG-PVPQPQDCPPSTCLNGGTCHLGTRH 426
AP+ SPT T PPT+ P P PP+ T L T
Sbjct: 373 --------APSTASPT-----------TQPPTLSIPNPSRSYTPPTPT----TSKLPT-- 407
Query: 427 HLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLTLGIEPVSPTSLRVGLQRYLQG 486
P+ VTP + L I V+ TS++V
Sbjct: 408 -----IPDW---------------DGRERVTPPISERIQLSIHFVNDTSIQVSWLSLFTV 447
Query: 487 SSVQLRSLRLTYRNLSGPDKRLVTLRLPASLAEY-TVTQLRPNATYSVCVMPLGPGRVPE 545
+ +L +++ + + G +V R+ + ++ ++ L P +TY +C++PL
Sbjct: 448 MAYKLTWVKMGHSLVGG----IVQERIVSGEKQHLSLVNLEPRSTYRICLVPLDAFNYRA 503
Query: 546 GEEA-CGEAHTPPA-------VHSNHAPVTQAREGNLPLLIAPALAAVLLAALAAVGAAY 597
E+ C EA T + S+H T G+ P L+A + ++ L + + +
Sbjct: 504 VEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGS-PFLLAGLIGGAVIFVLVVLLSVF 562
Query: 598 C 598
C
Sbjct: 563 C 563
>gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens]
Length = 713
Score = 120 bits (301), Expect = 4e-27
Identities = 111/400 (27%), Positives = 155/400 (38%), Gaps = 76/400 (19%)
Query: 7 LLLPLLLLLALG--------PGVQGCPSGCQCS------------QPQTVFCTARQGTTV 46
L+ PLLL G P CP C C + TV C T V
Sbjct: 4 LVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAV 63
Query: 47 PRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLD 106
P +P T L + N I +D L L LDLSQN + F L L +L
Sbjct: 64 PPALPAGTQTLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLH 123
Query: 107 LTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPL 166
L N+L + + +F GL L+ LYL N++ I P AF L LL L L N LRA+
Sbjct: 124 LEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSR 183
Query: 167 ---RLPRLLLLDLSHNSLLA-LEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLD 222
LP L +L + N + A L+ AN+ +L LAG+ L+++ + L++L L
Sbjct: 184 WFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLS 243
Query: 223 VSDNQLERVP------------------PVIR---------------------------- 236
DNQL RVP P+ R
Sbjct: 244 FYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDK 303
Query: 237 ----GLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRL 292
L LT+L + N R++ + P L ++ L ++N +L AL P L+
Sbjct: 304 FALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQE 363
Query: 293 LAAARNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPP 332
+ NP C C + W + V P+ T C PP
Sbjct: 364 VGLHGNPIRCDCVIRWAN--ATGTRVRFIEPQSTLCAEPP 401
>gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens]
Length = 713
Score = 120 bits (301), Expect = 4e-27
Identities = 111/400 (27%), Positives = 155/400 (38%), Gaps = 76/400 (19%)
Query: 7 LLLPLLLLLALG--------PGVQGCPSGCQCS------------QPQTVFCTARQGTTV 46
L+ PLLL G P CP C C + TV C T V
Sbjct: 4 LVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAV 63
Query: 47 PRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLD 106
P +P T L + N I +D L L LDLSQN + F L L +L
Sbjct: 64 PPALPAGTQTLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLH 123
Query: 107 LTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPL 166
L N+L + + +F GL L+ LYL N++ I P AF L LL L L N LRA+
Sbjct: 124 LEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSR 183
Query: 167 ---RLPRLLLLDLSHNSLLA-LEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLD 222
LP L +L + N + A L+ AN+ +L LAG+ L+++ + L++L L
Sbjct: 184 WFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLS 243
Query: 223 VSDNQLERVP------------------PVIR---------------------------- 236
DNQL RVP P+ R
Sbjct: 244 FYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDK 303
Query: 237 ----GLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRL 292
L LT+L + N R++ + P L ++ L ++N +L AL P L+
Sbjct: 304 FALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQE 363
Query: 293 LAAARNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPP 332
+ NP C C + W + V P+ T C PP
Sbjct: 364 VGLHGNPIRCDCVIRWAN--ATGTRVRFIEPQSTLCAEPP 401
>gi|198041768 synleurin [Homo sapiens]
Length = 622
Score = 119 bits (298), Expect = 9e-27
Identities = 113/421 (26%), Positives = 174/421 (41%), Gaps = 63/421 (14%)
Query: 2 CSRVPLLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVFE 61
C R+ L++ LLL L + GC S CQ + + C +++P++ P TV LY+
Sbjct: 10 CLRLFLVVTCYLLLLLHKEILGCSSVCQLCTGRQINCRNLGLSSIPKNFPESTVFLYLTG 69
Query: 62 NGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFR 121
N I+ ++ GL L L L + I + F L +L L L N + + F+
Sbjct: 70 NNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFK 129
Query: 122 GLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSH 178
GL L LYL N++ + G F+ L + L LQ N L L + + L +LDLS+
Sbjct: 130 GLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSN 189
Query: 179 NSLLAL-EPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP-VIR 236
N++L + E G N+ L L L ++ F L++L L +S N +E + P +
Sbjct: 190 NNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFK 249
Query: 237 GLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGD-------------- 282
GL L L L N+RI + + +G+ L+ L +S+ L+ L D
Sbjct: 250 GLANLEYL-LLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLD 308
Query: 283 ----------------------------LSGLFPR-------LRLLAAARNPFNCVCPLS 307
L+ L PR L L A NP+ C C L
Sbjct: 309 RNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSNPWECNCKLL 368
Query: 308 WFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPTTRPVVRE 367
W+ S +TL C PP GR L ++ + T++ V VV+
Sbjct: 369 GLRDWLASSAITL----NIYCQNPPSMRGRALRYINITN----CVTSSINVSRAWAVVKS 420
Query: 368 P 368
P
Sbjct: 421 P 421
>gi|52138725 leucine rich repeat and Ig domain containing 4 [Homo
sapiens]
Length = 593
Score = 117 bits (294), Expect = 3e-26
Identities = 113/358 (31%), Positives = 150/358 (41%), Gaps = 64/358 (17%)
Query: 10 PLLLLLALGPGVQG-CPSGCQC-SQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITML 67
PLL LL L G G CP+ C C SQPQ V C RQ VP +P DT L + N + L
Sbjct: 16 PLLFLLLLPGGSGGSCPAVCDCTSQPQAVLCGHRQLEAVPGGLPLDTELLDLSGNRLWGL 75
Query: 68 DAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRL- 126
G + L LQ LDLS NQ+++L G F L +L L L NRL + F GL L
Sbjct: 76 QQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALT 135
Query: 127 -----------------------ERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRAL 163
++L +G N + + PGAF L +L L L+ L +
Sbjct: 136 LLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTV 195
Query: 164 PPL---RLPRLLLLDLSH-------------------------NSLLALEPGILDTANVE 195
P L RLP L+ L L SL AL+PG L N+
Sbjct: 196 PGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLNLS 255
Query: 196 ALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVP-----PVIRGLRGLTRLRLAGNT 250
+L + L + L L LD+S N + +P P++R L LRL+G
Sbjct: 256 SLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVR----LQELRLSGAC 311
Query: 251 RIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPLSW 308
+ + GL A LDV++ +LQ L +L L + NP C C L W
Sbjct: 312 -LTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLW 368
Score = 54.7 bits (130), Expect = 3e-07
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 51 PPDTVGLYVFENGITMLDAGSFA-----GLPGLQLLDLSQNQIASLPSGVFQPLANLSNL 105
P VGL + IT + S L L++LDLSQN I+++P+ PL L L
Sbjct: 246 PGSLVGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQEL 305
Query: 106 DLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNEL----R 161
L+ L I F GL L + N ++ ++ AF + D+L+ L+L N L R
Sbjct: 306 RLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCR 365
Query: 162 ALPPLRLPRLLLLDLS 177
L LRL R L +S
Sbjct: 366 LLWLLRLRRHLDFGMS 381
>gi|153251229 chondroadherin precursor [Homo sapiens]
Length = 359
Score = 115 bits (289), Expect = 1e-25
Identities = 102/346 (29%), Positives = 144/346 (41%), Gaps = 13/346 (3%)
Query: 4 RVPLLLPLLLLLALGPGVQGCPSGCQC-SQPQTVFCTARQGTTVPRDVPPDTVGLYVFEN 62
R LLL L LL L P + CP C C S Q V C +P+ V T L + N
Sbjct: 3 RPMLLLSLGLLAGLLPALAACPQNCHCHSDLQHVICDKVGLQKIPK-VSEKTKLLNLQRN 61
Query: 63 GITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRG 122
+L A SF +P L L L QI + +G F+ L L L L+ N + + F
Sbjct: 62 NFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDD 121
Query: 123 LRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDN---ELRALPPLRLPRLLLLDLSHN 179
L L LYL N++ + G L L L+L +N ELRA L L LS N
Sbjct: 122 LTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSEN 181
Query: 180 SLLALEPGIL-DTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP-VIRG 237
+L +L+PG L D N+ + L S+LR + +L +S N L+ +P +
Sbjct: 182 ALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQS 241
Query: 238 LRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAAR 297
NT + + G+ L+ + + N L LP + F L LA
Sbjct: 242 FGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPSNFP--FDSLETLALTN 299
Query: 298 NPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELD 343
NP+ C C L W+ AS + C P K G+ + + D
Sbjct: 300 NPWKCTCQLRGLRRWLEAK----ASRPDATCASPAKFKGQHIRDTD 341
>gi|122937470 carboxypeptidase N, polypeptide 2, 83kD [Homo sapiens]
Length = 545
Score = 112 bits (280), Expect = 1e-24
Identities = 93/300 (31%), Positives = 135/300 (45%), Gaps = 29/300 (9%)
Query: 57 LYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEIT 116
L + +N + L F L LQ L LS N ++ LP GVF L +L L L +N + E+
Sbjct: 174 LNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELP 233
Query: 117 NETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLL 173
+ F L LERL+L +N I H+ F +L L L LQ N LR LP P L+
Sbjct: 234 PQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVG 293
Query: 174 LDLSHNSLLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP 233
L L+HN L + + EG F+ L NL L +S N + +P
Sbjct: 294 LSLTHNQL-----------------------ETVAEGTFAHLSNLRSLMLSYNAITHLPA 330
Query: 234 -VIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRL 292
+ R L L +L L G+ + L P L+ L+ L +S L LP + L
Sbjct: 331 GIFRDLEELVKLYL-GSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFN 389
Query: 293 LAAARNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPAT 352
LA NP+ C C L++ W+++ L + +T C P G+++ L+ CP T
Sbjct: 390 LALHGNPWQCDCHLAYLFNWLQQYTDRLLN-IQTYCAGPAYLKGQVVPALNEKQLVCPVT 448
Score = 111 bits (278), Expect = 2e-24
Identities = 91/295 (30%), Positives = 129/295 (43%), Gaps = 7/295 (2%)
Query: 14 LLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAGSFA 73
LL L Q CP GC C Q VFC+ + TVP D+PP T + E T L+ +F
Sbjct: 12 LLLLARPAQPCPMGCDCFV-QEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFG 70
Query: 74 GLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGK 133
P L + Q+ F L L +L++T + ++ F L L +L L
Sbjct: 71 SNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNF 130
Query: 134 NRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSHNSLLALEPGIL- 189
N + + G F L L L LQ N+L+ALP L L L+L+ N L L +
Sbjct: 131 NMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFH 190
Query: 190 DTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP-VIRGLRGLTRLRLAG 248
+++ L+L+ L L +G+F +L +L +L + N + +PP V L L RL L
Sbjct: 191 PLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQR 250
Query: 249 NTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCV 303
N I L A L L L + L+ LP L P L L+ N V
Sbjct: 251 NA-ITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETV 304
Score = 66.2 bits (160), Expect = 9e-11
Identities = 41/107 (38%), Positives = 56/107 (52%)
Query: 52 PDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANR 111
P VGL + N + + G+FA L L+ L LS N I LP+G+F+ L L L L +N
Sbjct: 289 PCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNN 348
Query: 112 LHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDN 158
L + F+ L +LE L L KN++ + G FDT L L L N
Sbjct: 349 LTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGN 395
>gi|229089140 leucine rich repeat containing 24 [Homo sapiens]
Length = 513
Score = 111 bits (278), Expect = 2e-24
Identities = 79/203 (38%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 1 MCSRVPLLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVF 60
M R P LLPLLLLL L GCP+ C+C TV C A + VP +PP T L++
Sbjct: 1 MALRAPALLPLLLLL-LPLRAAGCPAACRCYSA-TVECGALRLRVVPLGIPPGTQTLFLQ 58
Query: 61 ENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETF 120
+N I L+ G+ A L L+ L L N + +L +G F+ L L LT+NRL + + F
Sbjct: 59 DNNIARLEPGALAPLAALRRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAF 118
Query: 121 RGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLS 177
GL +L LYL N++ + F L RL EL LQ+N + L L L LLDLS
Sbjct: 119 VGLAQLRVLYLAGNQLARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLS 178
Query: 178 HNSLLALEPGILD-TANVEALRL 199
N L + L A+++ LRL
Sbjct: 179 RNQLGTISREALQPLASLQVLRL 201
Score = 33.5 bits (75), Expect = 0.66
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 230 RVPPVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPR 289
RV P+ G+ T+ + IA+L P LA LAAL+ L + N SL+AL PR
Sbjct: 42 RVVPL--GIPPGTQTLFLQDNNIARLEPGALAPLAALRRLYLHNNSLRALEAGAFRAQPR 99
Query: 290 LRLLAAARN 298
L LA N
Sbjct: 100 LLELALTSN 108
>gi|109809759 leucine rich repeat transmembrane neuronal 3 [Homo
sapiens]
Length = 581
Score = 108 bits (271), Expect = 1e-23
Identities = 110/423 (26%), Positives = 181/423 (42%), Gaps = 73/423 (17%)
Query: 7 LLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGL--------- 57
++ P +LL L +GCP GC+C + + V+C +++ +P + +GL
Sbjct: 17 VIAPTVLLTMLSSAERGCPKGCRC-EGKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQK 75
Query: 58 ---------------YVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANL 102
Y+ N I+ +D +F G+ L+ L LS N+I+ + F+P+ NL
Sbjct: 76 LKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNL 135
Query: 103 SNLDLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRA 162
NLDL+ N+LH + +E FRGLR+L L+L N +R I F L L L N +R+
Sbjct: 136 RNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRS 195
Query: 163 LPP---LRLPRLLLLDLSHNSLLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLH 219
L + RL L L HN +L+ LF RL +L
Sbjct: 196 LARNVFAGMIRLKELHLEHNQ-----------------------FSKLNLALFPRLVSLQ 232
Query: 220 DLDVSDNQLERVPPVIRGL-RGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQA 278
+L + N++ + + L RL L+GN A P + LQ L++ + L
Sbjct: 233 NLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 279 LPGDLSGLFPRLRLLAAARNPFNC---VCPL-SWFGPW--VRESHVTLASPEETRCHFPP 332
+ ++ + L ++ A N + C +C L +W + +RE+ + ASP+E +
Sbjct: 293 IGQEILDSWISLNDISLAGNIWECSRNICSLVNWLKSFKGLRENTIICASPKELQ----- 347
Query: 333 KNAGRLLLELDYADFGCPATTT-------TATVPTTRPVVREPTALSSSLAPTWLSPTEP 385
G +++ C +TT PT +P + P S P + TEP
Sbjct: 348 ---GVNVIDAVKNYSICGKSTTERFDLARALPKPTFKPKLPRPKHESKPPLPPTVGATEP 404
Query: 386 ATE 388
E
Sbjct: 405 GPE 407
>gi|38202222 fibronectin leucine rich transmembrane protein 3
precursor [Homo sapiens]
Length = 649
Score = 108 bits (271), Expect = 1e-23
Identities = 145/594 (24%), Positives = 241/594 (40%), Gaps = 96/594 (16%)
Query: 22 QGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLL 81
+ CPS C+C ++C R T++P +P D LY+ N I +AG + L L +
Sbjct: 29 KSCPSVCRCDAG-FIYCNDRFLTSIPTGIPEDATTLYLQNNQIN--NAGIPSDLKNLLKV 85
Query: 82 D---LSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIR- 137
+ L N + P+ + + + L L N + IT ++ + LE L+L N +
Sbjct: 86 ERIYLYHNSLDEFPTNLPK---YVKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSA 142
Query: 138 -HIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLL-LDLSHNSLLALE-PGILDTANV 194
I+ GAF + L L L N L +P LPR + L L N + + P + ++
Sbjct: 143 VSIEEGAFRDSNYLRLLFLSRNHLSTIP-WGLPRTIEELRLDDNRISTISSPSLQGLTSL 201
Query: 195 EALRLAG--LGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRGLTRLRLAGNTRI 252
+ L L G L L + +F L NL +L + N L P + G L +L L N I
Sbjct: 202 KRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVNLPGTN-LRKLYLQDN-HI 259
Query: 253 AQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPLSWFGPW 312
++ P + L L LD+SN +L LP + + L NP+ C C + W W
Sbjct: 260 NRVPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDLDNITQLILRNNPWYCGCKMKWVRDW 319
Query: 313 VRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPTTRPVVREPTALS 372
++ V + + C P K G + +L+ F C + +T+ T TA+
Sbjct: 320 LQSLPVKV-NVRGLMCQAPEKVRGMAIKDLNAELFDCKDSGIVSTIQIT-------TAIP 371
Query: 373 SSLAPTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDCPPSTCLNGGTCHLGTRHHLACLC 432
+++ P P T+ P + P+ T+ H
Sbjct: 372 NTVYPAQGQWPAPVTKQPD-----------IKNPK---------------LTKDH----- 400
Query: 433 PEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLTLGIEPVSPTSLRVGLQRYLQGSSVQLR 492
T SP+ T +T+ ++ V+ ++ + + L ++++L
Sbjct: 401 ---------------QTTGSPSRKT------ITITVKSVTSDTIHISWKLALPMTALRLS 439
Query: 493 SLRLTYRNLSGPDKRLVTLRLPASLAEYTVTQLRPNATYSVCVMPLGPGRVPEGEE--AC 550
L+L + G + + +EY VT L P++ Y VC++P+ + +E C
Sbjct: 440 WLKLGHSPAFGSITETI---VTGERSEYLVTALEPDSPYKVCMVPMETSNLYLFDETPVC 496
Query: 551 GEAHTPPAVHSNHAPVTQA---------REGNLPL--LIAPALAAVLLAALAAV 593
E T P N P T + NLPL +I A+A V +A LA V
Sbjct: 497 IETETAPLRMYN--PTTTLNREQEKEPYKNPNLPLAAIIGGAVALVTIALLALV 548
>gi|7019383 fibronectin leucine rich transmembrane protein 3
precursor [Homo sapiens]
Length = 649
Score = 108 bits (271), Expect = 1e-23
Identities = 145/594 (24%), Positives = 241/594 (40%), Gaps = 96/594 (16%)
Query: 22 QGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLL 81
+ CPS C+C ++C R T++P +P D LY+ N I +AG + L L +
Sbjct: 29 KSCPSVCRCDAG-FIYCNDRFLTSIPTGIPEDATTLYLQNNQIN--NAGIPSDLKNLLKV 85
Query: 82 D---LSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIR- 137
+ L N + P+ + + + L L N + IT ++ + LE L+L N +
Sbjct: 86 ERIYLYHNSLDEFPTNLPK---YVKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSA 142
Query: 138 -HIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLL-LDLSHNSLLALE-PGILDTANV 194
I+ GAF + L L L N L +P LPR + L L N + + P + ++
Sbjct: 143 VSIEEGAFRDSNYLRLLFLSRNHLSTIP-WGLPRTIEELRLDDNRISTISSPSLQGLTSL 201
Query: 195 EALRLAG--LGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRGLTRLRLAGNTRI 252
+ L L G L L + +F L NL +L + N L P + G L +L L N I
Sbjct: 202 KRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVNLPGTN-LRKLYLQDN-HI 259
Query: 253 AQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPLSWFGPW 312
++ P + L L LD+SN +L LP + + L NP+ C C + W W
Sbjct: 260 NRVPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDLDNITQLILRNNPWYCGCKMKWVRDW 319
Query: 313 VRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPTTRPVVREPTALS 372
++ V + + C P K G + +L+ F C + +T+ T TA+
Sbjct: 320 LQSLPVKV-NVRGLMCQAPEKVRGMAIKDLNAELFDCKDSGIVSTIQIT-------TAIP 371
Query: 373 SSLAPTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDCPPSTCLNGGTCHLGTRHHLACLC 432
+++ P P T+ P + P+ T+ H
Sbjct: 372 NTVYPAQGQWPAPVTKQPD-----------IKNPK---------------LTKDH----- 400
Query: 433 PEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLTLGIEPVSPTSLRVGLQRYLQGSSVQLR 492
T SP+ T +T+ ++ V+ ++ + + L ++++L
Sbjct: 401 ---------------QTTGSPSRKT------ITITVKSVTSDTIHISWKLALPMTALRLS 439
Query: 493 SLRLTYRNLSGPDKRLVTLRLPASLAEYTVTQLRPNATYSVCVMPLGPGRVPEGEE--AC 550
L+L + G + + +EY VT L P++ Y VC++P+ + +E C
Sbjct: 440 WLKLGHSPAFGSITETI---VTGERSEYLVTALEPDSPYKVCMVPMETSNLYLFDETPVC 496
Query: 551 GEAHTPPAVHSNHAPVTQA---------REGNLPL--LIAPALAAVLLAALAAV 593
E T P N P T + NLPL +I A+A V +A LA V
Sbjct: 497 IETETAPLRMYN--PTTTLNREQEKEPYKNPNLPLAAIIGGAVALVTIALLALV 548
>gi|13375646 leucine rich repeat and fibronectin type III domain
containing 3 [Homo sapiens]
Length = 628
Score = 108 bits (270), Expect = 2e-23
Identities = 161/661 (24%), Positives = 220/661 (33%), Gaps = 114/661 (17%)
Query: 8 LLPLLL-LLALGPGVQG--------CPSGCQC---SQPQTVFCTARQGTTVPRDVPPDTV 55
+LPLLL LL L P CP C+C S P +V C VP +
Sbjct: 3 ILPLLLCLLPLAPASSPPQSATPSPCPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAA 62
Query: 56 GLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEI 115
L + +N I + A + GL L LS+N I + +G F L L L L NRL +
Sbjct: 63 ELRLADNFIASVRRRDLANMTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSL 122
Query: 116 TNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLE-LKLQDNELRALPPLRLPRLLLL 174
RGL L L L N++ + GA D LE L L N L LP L RL
Sbjct: 123 GEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRL--- 179
Query: 175 DLSHNSLLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPV 234
NV L L L + G FSRL L LD++ N+L +PP
Sbjct: 180 -----------------GNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPP- 221
Query: 235 IRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLA 294
+ S L L A P G +LA
Sbjct: 222 ---------------------------------DPLFSRLPLLARP---RGSPASALVLA 245
Query: 295 AARNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTT 354
NP +C C L W RE + C PP GR + +F C
Sbjct: 246 FGGNPLHCNCELVWLRRLAREDDL-------EACASPPALGGRYFWAVGEEEFVCEPPVV 298
Query: 355 T-----ATVPTTRPVVREPTALSS-SLAPTWLSPTEPATEAPSPPSTAPPTVGP--VPQP 406
T VP RP A+ W+SP S P V +P
Sbjct: 299 THRSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARAFPNGTLELLVTEP 358
Query: 407 QDCPPSTCLNGGTCHLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLTL 466
D TC+ T + P L + P +TP S +
Sbjct: 359 GDGGIFTCIAANAAGEATAAVELTVGPPPPPQLANSTSCDPPRDGDPDALTPPSAASASA 418
Query: 467 GIEPVSPTSLRVGLQRYLQGSSVQL------------RSLRLTYRNLSGPDKRLVTLRLP 514
+ P + R G+Q G++ L R ++ Y S D LV +P
Sbjct: 419 KVADTGPPTDR-GVQVTEHGATAALVQWPDQRPIPGIRMYQIQYN--SSADDILVYRMIP 475
Query: 515 ASLAEYTVTQLRPNATYSVCVMPL----GPGRVPEGEEACGEAHTPPAVHSNHAPVTQAR 570
A + +T L TY +CV+ + G C T PA+ AP
Sbjct: 476 AESRSFLLTDLASGRTYDLCVLAVYEDSATGLTATRPVGCARFSTEPALRPCGAPHAPFL 535
Query: 571 EGNLPLLIAPALAAVLLAALAAVGAAYCVRRGR----------AMAAAAQDKGQVGPGAG 620
G + + + + A +L + + Y V G+ + +Q G +GP
Sbjct: 536 GGTMIIALGGVIVASVLVFIFVLLMRYKVHGGQPPGKAKIPAPVSSVCSQTNGALGPTPT 595
Query: 621 P 621
P
Sbjct: 596 P 596
>gi|7662320 leucine-rich repeats and immunoglobulin-like domains 2
[Homo sapiens]
Length = 1065
Score = 108 bits (269), Expect = 2e-23
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 30/293 (10%)
Query: 62 NGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFR 121
N I +++ +F GL L+ L + +N I+ L G F L N+ L+L N L +
Sbjct: 225 NRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLY 284
Query: 122 GLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLLDLSHNSL 181
GLR L++LY+ +N I I P A++ RL E LDLS+N L
Sbjct: 285 GLRMLQQLYVSQNAIERISPDAWEFCQRLSE---------------------LDLSYNQL 323
Query: 182 LAL-EPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQ----LERVPPVIR 236
L E + + +E L L + + +G+F L NL LD+ +N+ +E
Sbjct: 324 TRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFA 383
Query: 237 GLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAA 296
GL LT+L L GN +I + + GL +L+ LD++N ++ ++ + L+ L
Sbjct: 384 GLTSLTKLILQGN-QIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQ-THLKELILN 441
Query: 297 RNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGC 349
+ C C L W W+ +++ C P AG+ +L +D DF C
Sbjct: 442 TSSLLCDCHLKWLLQWLVDNN--FQHSVNVSCAHPEWLAGQSILNVDLKDFVC 492
Score = 86.3 bits (212), Expect = 9e-17
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 36/300 (12%)
Query: 11 LLLLLALGPGVQGCPSGCQCSQPQTVFCTARQ-----GTTVPRDVPPDTVGLYVFENGIT 65
LLLL A G G+ CP+ C C P + C+ R+ + +PPDT L N ++
Sbjct: 32 LLLLPAAGAGL--CPAPCSCRIP-LLDCSRRKLPAPSWRALSGLLPPDTAILDFSHNRLS 88
Query: 66 --------------MLDAGSFAGLP-------GLQLLDLSQNQIASLPSGVFQPLANLSN 104
++ +P + LL L N I + + Q L +
Sbjct: 89 NWNISLESQTLQEVKMNYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQALQFYPALES 148
Query: 105 LDLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTL-DRLLELKLQDNELRAL 163
LDL++N + EI +F + +L+ L L NRI ++ G FD L LL +KL N + +
Sbjct: 149 LDLSSNIISEIKTSSFPRM-QLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMI 207
Query: 164 PP--LRLPRLLLLDLSHNSLLALEP-GILDTANVEALRLAGLGLQQLDEGLFSRLRNLHD 220
PP +LP L L+L N + +E ++ +L++ G+ +L +G F L N+ +
Sbjct: 208 PPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEE 267
Query: 221 LDVSDNQLERV-PPVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQAL 279
L++ N L RV + GLR L +L ++ N I ++ P+ L ELD+S L L
Sbjct: 268 LELEHNNLTRVNKGWLYGLRMLQQLYVSQNA-IERISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 58.2 bits (139), Expect = 2e-08
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 57 LYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEIT 116
LYV +N I + ++ L LDLS NQ+ L F L+ L L+L NR+ I
Sbjct: 292 LYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIA 351
Query: 117 NETFRGLRRLERLYLGKNRIR---HIQPGAFDTLDRLLELKLQDNELRALPP---LRLPR 170
+ FR L L+ L L N I AF L L +L LQ N+++++ + L
Sbjct: 352 DGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLES 411
Query: 171 LLLLDLSHNSLLALEPGILDTANVEALRL 199
L LDL++N++++++ +++ L L
Sbjct: 412 LEHLDLNNNAIMSIQENAFSQTHLKELIL 440
>gi|7662102 leucine rich repeat transmembrane neuronal 2 [Homo
sapiens]
Length = 516
Score = 107 bits (268), Expect = 3e-23
Identities = 109/373 (29%), Positives = 165/373 (44%), Gaps = 32/373 (8%)
Query: 11 LLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAG 70
L +L ALG CP C+C + +C ++ +VP ++GL + N IT L+
Sbjct: 24 LKMLPALG---MACPPKCRCEK-LLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERD 79
Query: 71 SFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLY 130
FA L L L NQI+++ FQ L L L L++N++ + N TF L L+ L
Sbjct: 80 QFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLD 139
Query: 131 LGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRL----PRLLLLDLSHNSLLAL-E 185
L N++ + P F L +L L L+ N LR + P+RL L LDLS N L +L
Sbjct: 140 LSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTI-PVRLFWDCRSLEFLDLSTNRLRSLAR 198
Query: 186 PGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRG-LTRL 244
G + L L L +++ F RL +LH L + N++ + + G L +L
Sbjct: 199 NGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKL 258
Query: 245 RLAGNTRIAQLRPEDLAGLAALQELDV---SNLSLQALPGDLSGLFPRLRLLAAARNPFN 301
L GN +++ DL + L + N L +L + L + + N +
Sbjct: 259 DLTGN----EIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSGNLWE 314
Query: 302 C---VCPL-SWFGPWV-RESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTA 356
C +C L SW G + R H L CH P G +L+ + C +TT
Sbjct: 315 CSARICALASWLGSFQGRWEHSIL-------CHSPDHTQGEDILDAVHGFQLCWNLSTTV 367
Query: 357 TVPTTRPVVREPT 369
TV T R+PT
Sbjct: 368 TVMAT--TYRDPT 378
>gi|225579152 insulin-like growth factor binding protein, acid
labile subunit isoform 1 precursor [Homo sapiens]
Length = 643
Score = 107 bits (266), Expect = 5e-23
Identities = 112/373 (30%), Positives = 157/373 (42%), Gaps = 82/373 (21%)
Query: 7 LLLPLLLL--LALGP--------GVQG------CPSGCQCSQPQ-----TVFCTARQGTT 45
L L LLLL +ALGP G G CP+ C CS +VFC++R T
Sbjct: 46 LALALLLLSWVALGPRSLEGADPGTPGEAEGPACPAACVCSYDDDADELSVFCSSRNLTR 105
Query: 46 VPRDVPPDTVGLYVFENGIT---------------------------------------- 65
+P VP T L++ N ++
Sbjct: 106 LPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHL 165
Query: 66 --------MLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITN 117
L G+FA P L L LS N+++ L G+F+ L +L +L+L N L + +
Sbjct: 166 HLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPD 225
Query: 118 ETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLL 174
FRGL L L L NR+ ++QP F L L EL L N LRA+ ++LPRL L
Sbjct: 226 AAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKL 285
Query: 175 DLSHNSLLALEPGILDTANVEALRLAGLG---LQQLDEGLFSRLRNLHDLDVSDNQLERV 231
L N + A+ PG ++ALR L + L E F L L L +S N + +
Sbjct: 286 YLDRNLIAAVAPGAF--LGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASL 343
Query: 232 -PPVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRL 290
P + L L L+L G+ RI QL GL L+ L + + LQ + +G F L
Sbjct: 344 RPRTFKDLHFLEELQL-GHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVK---AGAFLGL 399
Query: 291 RLLAAARNPFNCV 303
+A NC+
Sbjct: 400 TNVAVMNLSGNCL 412
Score = 100 bits (249), Expect = 4e-21
Identities = 89/270 (32%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 62 NGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFR 121
N + L +F GL GL++L LS N IASL F+ L L L L NR+ ++ +F
Sbjct: 314 NRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFE 373
Query: 122 GLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSH 178
GL +LE L L N+++ ++ GAF L + + L N LR LP L +L L L
Sbjct: 374 GLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEG 433
Query: 179 NSLLALEP-GILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVP-PVIR 236
+ L + P + + L L GL ++E L L +LD++ NQL +P + +
Sbjct: 434 SCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQ 493
Query: 237 GLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAA 296
GL L L L+ N R+A+L + L L LDVS+ L+ALP L RLR L+
Sbjct: 494 GLGKLEYLLLSRN-RLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLR 552
Query: 297 R--------------------NPFNCVCPL 306
NP++C CPL
Sbjct: 553 NNSLRTFTPQPPGLERLWLEGNPWDCGCPL 582
Score = 92.0 bits (227), Expect = 2e-18
Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 10/204 (4%)
Query: 127 ERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSHNSLLA 183
+ L+L N + + P AF L L L LQ +L +L P L L L L L N L +
Sbjct: 115 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 174
Query: 184 LEPGIL-DTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPV-IRGLRGL 241
L G T + +L L+ L +L++GLF L +L DL++ N L +P RGL L
Sbjct: 175 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 234
Query: 242 TRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFN 301
L LAGN R+A L+P +GLA L+ELD+S +L+A+ ++ PRL+ L RN
Sbjct: 235 RELVLAGN-RLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIA 293
Query: 302 CVCPLSWFG----PWVRESHVTLA 321
V P ++ G W+ SH +A
Sbjct: 294 AVAPGAFLGLKALRWLDLSHNRVA 317
>gi|4826772 insulin-like growth factor binding protein, acid labile
subunit isoform 2 precursor [Homo sapiens]
Length = 605
Score = 107 bits (266), Expect = 5e-23
Identities = 112/373 (30%), Positives = 157/373 (42%), Gaps = 82/373 (21%)
Query: 7 LLLPLLLL--LALGP--------GVQG------CPSGCQCSQPQ-----TVFCTARQGTT 45
L L LLLL +ALGP G G CP+ C CS +VFC++R T
Sbjct: 8 LALALLLLSWVALGPRSLEGADPGTPGEAEGPACPAACVCSYDDDADELSVFCSSRNLTR 67
Query: 46 VPRDVPPDTVGLYVFENGIT---------------------------------------- 65
+P VP T L++ N ++
Sbjct: 68 LPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHL 127
Query: 66 --------MLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITN 117
L G+FA P L L LS N+++ L G+F+ L +L +L+L N L + +
Sbjct: 128 HLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPD 187
Query: 118 ETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLL 174
FRGL L L L NR+ ++QP F L L EL L N LRA+ ++LPRL L
Sbjct: 188 AAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKL 247
Query: 175 DLSHNSLLALEPGILDTANVEALRLAGLG---LQQLDEGLFSRLRNLHDLDVSDNQLERV 231
L N + A+ PG ++ALR L + L E F L L L +S N + +
Sbjct: 248 YLDRNLIAAVAPGAF--LGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASL 305
Query: 232 -PPVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRL 290
P + L L L+L G+ RI QL GL L+ L + + LQ + +G F L
Sbjct: 306 RPRTFKDLHFLEELQL-GHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVK---AGAFLGL 361
Query: 291 RLLAAARNPFNCV 303
+A NC+
Sbjct: 362 TNVAVMNLSGNCL 374
Score = 100 bits (249), Expect = 4e-21
Identities = 89/270 (32%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 62 NGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFR 121
N + L +F GL GL++L LS N IASL F+ L L L L NR+ ++ +F
Sbjct: 276 NRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFE 335
Query: 122 GLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSH 178
GL +LE L L N+++ ++ GAF L + + L N LR LP L +L L L
Sbjct: 336 GLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEG 395
Query: 179 NSLLALEP-GILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVP-PVIR 236
+ L + P + + L L GL ++E L L +LD++ NQL +P + +
Sbjct: 396 SCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQ 455
Query: 237 GLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAA 296
GL L L L+ N R+A+L + L L LDVS+ L+ALP L RLR L+
Sbjct: 456 GLGKLEYLLLSRN-RLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLR 514
Query: 297 R--------------------NPFNCVCPL 306
NP++C CPL
Sbjct: 515 NNSLRTFTPQPPGLERLWLEGNPWDCGCPL 544
Score = 92.0 bits (227), Expect = 2e-18
Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 10/204 (4%)
Query: 127 ERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSHNSLLA 183
+ L+L N + + P AF L L L LQ +L +L P L L L L L N L +
Sbjct: 77 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 136
Query: 184 LEPGIL-DTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPV-IRGLRGL 241
L G T + +L L+ L +L++GLF L +L DL++ N L +P RGL L
Sbjct: 137 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 196
Query: 242 TRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFN 301
L LAGN R+A L+P +GLA L+ELD+S +L+A+ ++ PRL+ L RN
Sbjct: 197 RELVLAGN-RLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIA 255
Query: 302 CVCPLSWFG----PWVRESHVTLA 321
V P ++ G W+ SH +A
Sbjct: 256 AVAPGAFLGLKALRWLDLSHNRVA 279
>gi|153791507 leucine rich repeat neuronal 3 [Homo sapiens]
Length = 708
Score = 106 bits (265), Expect = 6e-23
Identities = 138/614 (22%), Positives = 239/614 (38%), Gaps = 107/614 (17%)
Query: 5 VPLLLPLLLLLALGPGVQG------CPSGCQCS------------QPQTVFCTARQGTTV 46
+PL + +LL LA+ VQ CP C C + TV C T
Sbjct: 4 MPLRIHVLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTF 63
Query: 47 PRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLD 106
P +P +T L + N I ++ + + L LDLSQN ++S+ + + + L ++
Sbjct: 64 PARLPANTQILLLQTNNIAKIEYSTDFPV-NLTGLDLSQNNLSSVTNINVKKMPQLLSVY 122
Query: 107 LTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPL 166
L N+L E+ + L L+ LY+ N + I PGAF L LL L L N L+ +
Sbjct: 123 LEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSK 182
Query: 167 ---RLPRLLLLDLSHNSLLALEP-GILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLD 222
LP L +L + N ++ ++ N+ +L +AG+ L ++ + L NL +
Sbjct: 183 WFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESIS 242
Query: 223 VSDNQLERVP------------------PVIRGLRG------------------------ 240
DN+L +VP P+ R RG
Sbjct: 243 FYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDS 302
Query: 241 --------LTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRL 292
L ++ N R++ + P L L+ L +++ +L AL P L+
Sbjct: 303 LAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKE 362
Query: 293 LAAARNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPAT 352
++ NP C C + W + ++++ P+ C PP+ G+ + ++ + D
Sbjct: 363 ISIHSNPIRCDCVIRWMN--MNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDM----- 415
Query: 353 TTTATVPTTRPVVREPTALSSSL---APTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDC 409
+ P++ P + S+L A +++S AT P P P Q
Sbjct: 416 -----MEICLPLI-APESFPSNLNVEAGSYVSFHCRATAEPQ-----PEIYWITPSGQKL 464
Query: 410 PPSTCLNGGTCHL-GTRHHLACLCPEGFTGLY---CESQMGQGTRPSPTPVTPRPPR--- 462
P+T + H GT EG GLY + +G + V P+
Sbjct: 465 LPNTLTDKFYVHSEGTLDINGVTPKEG--GLYTCIATNLVGADLKSVMIKVDGSFPQDNN 522
Query: 463 -SLTLGIEPVSPTSLRVGLQRYLQGSSVQLRSLRLTYRNLSGPDKRLVTLRLPASLAEYT 521
SL + I + S+ V + S + S++ T + + R+P+ + Y
Sbjct: 523 GSLNIKIRDIQANSVLVS---WKASSKILKSSVKWTAFVKTENSHAAQSARIPSDVKVYN 579
Query: 522 VTQLRPNATYSVCV 535
+T L P+ Y +C+
Sbjct: 580 LTHLNPSTEYKICI 593
>gi|153792651 leucine rich repeat neuronal 3 [Homo sapiens]
Length = 708
Score = 106 bits (265), Expect = 6e-23
Identities = 138/614 (22%), Positives = 239/614 (38%), Gaps = 107/614 (17%)
Query: 5 VPLLLPLLLLLALGPGVQG------CPSGCQCS------------QPQTVFCTARQGTTV 46
+PL + +LL LA+ VQ CP C C + TV C T
Sbjct: 4 MPLRIHVLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTF 63
Query: 47 PRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLD 106
P +P +T L + N I ++ + + L LDLSQN ++S+ + + + L ++
Sbjct: 64 PARLPANTQILLLQTNNIAKIEYSTDFPV-NLTGLDLSQNNLSSVTNINVKKMPQLLSVY 122
Query: 107 LTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPL 166
L N+L E+ + L L+ LY+ N + I PGAF L LL L L N L+ +
Sbjct: 123 LEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSK 182
Query: 167 ---RLPRLLLLDLSHNSLLALEP-GILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLD 222
LP L +L + N ++ ++ N+ +L +AG+ L ++ + L NL +
Sbjct: 183 WFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESIS 242
Query: 223 VSDNQLERVP------------------PVIRGLRG------------------------ 240
DN+L +VP P+ R RG
Sbjct: 243 FYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDS 302
Query: 241 --------LTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRL 292
L ++ N R++ + P L L+ L +++ +L AL P L+
Sbjct: 303 LAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKE 362
Query: 293 LAAARNPFNCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPAT 352
++ NP C C + W + ++++ P+ C PP+ G+ + ++ + D
Sbjct: 363 ISIHSNPIRCDCVIRWMN--MNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDM----- 415
Query: 353 TTTATVPTTRPVVREPTALSSSL---APTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDC 409
+ P++ P + S+L A +++S AT P P P Q
Sbjct: 416 -----MEICLPLI-APESFPSNLNVEAGSYVSFHCRATAEPQ-----PEIYWITPSGQKL 464
Query: 410 PPSTCLNGGTCHL-GTRHHLACLCPEGFTGLY---CESQMGQGTRPSPTPVTPRPPR--- 462
P+T + H GT EG GLY + +G + V P+
Sbjct: 465 LPNTLTDKFYVHSEGTLDINGVTPKEG--GLYTCIATNLVGADLKSVMIKVDGSFPQDNN 522
Query: 463 -SLTLGIEPVSPTSLRVGLQRYLQGSSVQLRSLRLTYRNLSGPDKRLVTLRLPASLAEYT 521
SL + I + S+ V + S + S++ T + + R+P+ + Y
Sbjct: 523 GSLNIKIRDIQANSVLVS---WKASSKILKSSVKWTAFVKTENSHAAQSARIPSDVKVYN 579
Query: 522 VTQLRPNATYSVCV 535
+T L P+ Y +C+
Sbjct: 580 LTHLNPSTEYKICI 593
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,770,411
Number of Sequences: 37866
Number of extensions: 1840077
Number of successful extensions: 19973
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 613
Number of HSP's that attempted gapping in prelim test: 11552
Number of HSP's gapped (non-prelim): 5277
length of query: 673
length of database: 18,247,518
effective HSP length: 109
effective length of query: 564
effective length of database: 14,120,124
effective search space: 7963749936
effective search space used: 7963749936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.