Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 85838513
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|85838513 pantothenate kinase 2 isoform 1 preproprotein [Homo
sapiens]
(570 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|85838513 pantothenate kinase 2 isoform 1 preproprotein [Homo ... 1154 0.0
gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens] 633 0.0
gi|13375789 pantothenate kinase 3 [Homo sapiens] 629 e-180
gi|23510402 pantothenate kinase 1 isoform beta [Homo sapiens] 622 e-178
gi|24430175 pantothenate kinase 2 isoform 2 [Homo sapiens] 566 e-161
gi|24430167 pantothenate kinase 2 isoform 2 [Homo sapiens] 566 e-161
gi|23510398 pantothenate kinase 1 isoform gamma [Homo sapiens] 417 e-116
gi|8922665 pantothenate kinase 4 [Homo sapiens] 208 1e-53
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.004
gi|239755454 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017
gi|239754979 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017
gi|169168296 PREDICTED: hypothetical protein [Homo sapiens] 38 0.022
gi|169168044 PREDICTED: hypothetical protein [Homo sapiens] 38 0.022
gi|169167512 PREDICTED: hypothetical protein [Homo sapiens] 38 0.022
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 38 0.029
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 37 0.037
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 37 0.037
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 37 0.037
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 37 0.064
gi|239756566 PREDICTED: hypothetical protein [Homo sapiens] 36 0.083
gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo ... 36 0.083
gi|169213922 PREDICTED: hypothetical protein isoform 1 [Homo sap... 36 0.11
gi|169213920 PREDICTED: hypothetical protein isoform 2 [Homo sap... 36 0.11
gi|169214343 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 36 0.11
gi|154759273 testis specific, 10 interacting protein [Homo sapiens] 36 0.11
gi|4885323 G protein-coupled receptor 37 [Homo sapiens] 35 0.14
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 35 0.14
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 35 0.14
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 34 0.32
>gi|85838513 pantothenate kinase 2 isoform 1 preproprotein [Homo
sapiens]
Length = 570
Score = 1154 bits (2986), Expect = 0.0
Identities = 570/570 (100%), Positives = 570/570 (100%)
Query: 1 MRRLGPFHPRVHWAAPPSLSSGLHRLLFLRGTRIPSSTTLSPPRHDSLSLDGGTVNPPRV 60
MRRLGPFHPRVHWAAPPSLSSGLHRLLFLRGTRIPSSTTLSPPRHDSLSLDGGTVNPPRV
Sbjct: 1 MRRLGPFHPRVHWAAPPSLSSGLHRLLFLRGTRIPSSTTLSPPRHDSLSLDGGTVNPPRV 60
Query: 61 REPTGREAFGPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRL 120
REPTGREAFGPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRL
Sbjct: 61 REPTGREAFGPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRL 120
Query: 121 LLRMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAE 180
LLRMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAE
Sbjct: 121 LLRMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAE 180
Query: 181 GTRRDRLGSYSGPTSVSRQRVESLRKKRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEE 240
GTRRDRLGSYSGPTSVSRQRVESLRKKRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEE
Sbjct: 181 GTRRDRLGSYSGPTSVSRQRVESLRKKRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEE 240
Query: 241 EVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGR 300
EVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGR
Sbjct: 241 EVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGR 300
Query: 301 DKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQC 360
DKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQC
Sbjct: 301 DKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQC 360
Query: 361 YYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFG 420
YYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFG
Sbjct: 361 YYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFG 420
Query: 421 LCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEK 480
LCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEK
Sbjct: 421 LCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEK 480
Query: 481 REAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAMRLLAYALDY 540
REAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAMRLLAYALDY
Sbjct: 481 REAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAMRLLAYALDY 540
Query: 541 WSKGQLKALFSEHEGYFGAVGALLELLKIP 570
WSKGQLKALFSEHEGYFGAVGALLELLKIP
Sbjct: 541 WSKGQLKALFSEHEGYFGAVGALLELLKIP 570
>gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]
Length = 598
Score = 633 bits (1632), Expect = 0.0
Identities = 305/372 (81%), Positives = 341/372 (91%)
Query: 198 RQRVESLRKKRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEEEVESLKSIRKYLTSNVA 257
R+R++S RK RP FPWFG+DIGGTLVKLVYFEPKDITAEEE+EEVE+LKSIRKYLTSN A
Sbjct: 223 RRRMDSGRKNRPPFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTA 282
Query: 258 YGSTGIRDVHLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGRDKNFSSLHTVFCATGGG 317
YG TGIRDVHLELK+LT+CGRKGNLHFIRFP+ M FIQMG +KNFSSLHT CATGGG
Sbjct: 283 YGKTGIRDVHLELKNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGG 342
Query: 318 AYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPF 377
A+KFE+DF I DLQL KLDELDCLI+G+LY+DSVGFNG+ +CYYFENP + E CQK P+
Sbjct: 343 AFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPY 402
Query: 378 DLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEM 437
L NPYP+LLVN+GSGVSILAVYSKDNYKRVTGTSLGGGTF GLCCLLTGC TFEEALEM
Sbjct: 403 CLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEM 462
Query: 438 ASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEKREAVSKEDLARATLITI 497
A++GDST VDKLV+DIYGGDYERFGL G AVASSFGNMMSKEKR+++SKEDLARATL+TI
Sbjct: 463 AAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTI 522
Query: 498 TNNIGSIARMCALNENINQVVFVGNFLRINTIAMRLLAYALDYWSKGQLKALFSEHEGYF 557
TNNIGSIARMCALNENI++VVFVGNFLRIN ++M+LLAYA+D+WSKGQLKALF EHEGYF
Sbjct: 523 TNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYF 582
Query: 558 GAVGALLELLKI 569
GAVGALLEL K+
Sbjct: 583 GAVGALLELFKM 594
>gi|13375789 pantothenate kinase 3 [Homo sapiens]
Length = 370
Score = 629 bits (1622), Expect = e-180
Identities = 302/360 (83%), Positives = 336/360 (93%)
Query: 207 KRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEEEVESLKSIRKYLTSNVAYGSTGIRDV 266
K+P FPWFG+DIGGTLVKL YFEP DITAEEE+EEVESLKSIRKYLTSNVAYGSTGIRDV
Sbjct: 7 KKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDV 66
Query: 267 HLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFL 326
HLELKDLTL GR+GNLHFIRFPT D+P FIQMGRDKNFS+L TV CATGGGAYKFE+DF
Sbjct: 67 HLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFR 126
Query: 327 TIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLL 386
TIG+L L KLDELDCL+KG+LYIDSV FNG+++CYYF N ++ E+CQK+PF+L +PYPLL
Sbjct: 127 TIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186
Query: 387 LVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKV 446
+VNIGSGVSILAV+SKDNYKRVTGTSLGGGTF GLC LLTGC +FEEALEMAS+GDST+
Sbjct: 187 VVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQA 246
Query: 447 DKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEKREAVSKEDLARATLITITNNIGSIAR 506
DKLVRDIYGGDYERFGLPGWAVASSFGNM+ KEKRE+VSKEDLARATL+TITNNIGS+AR
Sbjct: 247 DKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVAR 306
Query: 507 MCALNENINQVVFVGNFLRINTIAMRLLAYALDYWSKGQLKALFSEHEGYFGAVGALLEL 566
MCA+NE IN+VVFVGNFLR+NT++M+LLAYALDYWSKGQLKALF EHEGYFGAVGALL L
Sbjct: 307 MCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGL 366
>gi|23510402 pantothenate kinase 1 isoform beta [Homo sapiens]
Length = 373
Score = 622 bits (1604), Expect = e-178
Identities = 299/363 (82%), Positives = 333/363 (91%)
Query: 207 KRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEEEVESLKSIRKYLTSNVAYGSTGIRDV 266
K+ FPWFG+DIGGTLVKLVYFEPKDITAEEE+EEVE+LKSIRKYLTSN AYG TGIRDV
Sbjct: 7 KKQTFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDV 66
Query: 267 HLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFL 326
HLELK+LT+CGRKGNLHFIRFP+ M FIQMG +KNFSSLHT CATGGGA+KFE+DF
Sbjct: 67 HLELKNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFR 126
Query: 327 TIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLL 386
I DLQL KLDELDCLI+G+LY+DSVGFNG+ +CYYFENP + E CQK P+ L NPYP+L
Sbjct: 127 MIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 186
Query: 387 LVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKV 446
LVN+GSGVSILAVYSKDNYKRVTGTSLGGGTF GLCCLLTGC TFEEALEMA++GDST V
Sbjct: 187 LVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNV 246
Query: 447 DKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEKREAVSKEDLARATLITITNNIGSIAR 506
DKLV+DIYGGDYERFGL G AVASSFGNMMSKEKR+++SKEDLARATL+TITNNIGSIAR
Sbjct: 247 DKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIAR 306
Query: 507 MCALNENINQVVFVGNFLRINTIAMRLLAYALDYWSKGQLKALFSEHEGYFGAVGALLEL 566
MCALNENI++VVFVGNFLRIN ++M+LLAYA+D+WSKGQLKALF EHEGYFGAVGALLEL
Sbjct: 307 MCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 366
Query: 567 LKI 569
K+
Sbjct: 367 FKM 369
>gi|24430175 pantothenate kinase 2 isoform 2 [Homo sapiens]
Length = 279
Score = 566 bits (1459), Expect = e-161
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 292 MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS 351
MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS
Sbjct: 1 MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS 60
Query: 352 VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT 411
VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT
Sbjct: 61 VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT 120
Query: 412 SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS 471
SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS
Sbjct: 121 SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS 180
Query: 472 FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM 531
FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM
Sbjct: 181 FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM 240
Query: 532 RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP 570
RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP
Sbjct: 241 RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP 279
>gi|24430167 pantothenate kinase 2 isoform 2 [Homo sapiens]
Length = 279
Score = 566 bits (1459), Expect = e-161
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 292 MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS 351
MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS
Sbjct: 1 MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS 60
Query: 352 VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT 411
VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT
Sbjct: 61 VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT 120
Query: 412 SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS 471
SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS
Sbjct: 121 SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS 180
Query: 472 FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM 531
FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM
Sbjct: 181 FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM 240
Query: 532 RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP 570
RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP
Sbjct: 241 RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP 279
>gi|23510398 pantothenate kinase 1 isoform gamma [Homo sapiens]
Length = 314
Score = 417 bits (1071), Expect = e-116
Identities = 219/363 (60%), Positives = 251/363 (69%), Gaps = 59/363 (16%)
Query: 207 KRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEEEVESLKSIRKYLTSNVAYGSTGIRDV 266
K+ FPWFG+DIGGTLVKLVYFEPKDITAEEE+EEVE+LKSIRKYLTSN AYG TGIRDV
Sbjct: 7 KKQTFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDV 66
Query: 267 HLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFL 326
HLELK+LT+CGRKGNLHFIRFP+ M FIQMG +KNFSSLHT CATGGGA+KFE+DF
Sbjct: 67 HLELKNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFR 126
Query: 327 TIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLL 386
I DLQL KLDELDCLI+G+LY+DSVGFNG+ +CYYFENP + E CQK P+ L NPYP+L
Sbjct: 127 MIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 186
Query: 387 LVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKV 446
LVN+GSGVSILAVYSKDNYKRVTGTS G + + DS
Sbjct: 187 LVNMGSGVSILAVYSKDNYKRVTGTSFGN-------------------MMSKEKRDSISK 227
Query: 447 DKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEKREAVSKEDLARATLITITNNIGSIAR 506
+ L R A + N + R E++ R
Sbjct: 228 EDLAR---------------ATLVTITNNIGSIARMCALNENIDR--------------- 257
Query: 507 MCALNENINQVVFVGNFLRINTIAMRLLAYALDYWSKGQLKALFSEHEGYFGAVGALLEL 566
VVFVGNFLRIN ++M+LLAYA+D+WSKGQLKALF EHEGYFGAVGALLEL
Sbjct: 258 ----------VVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 307
Query: 567 LKI 569
K+
Sbjct: 308 FKM 310
>gi|8922665 pantothenate kinase 4 [Homo sapiens]
Length = 773
Score = 208 bits (529), Expect = 1e-53
Identities = 139/393 (35%), Positives = 222/393 (56%), Gaps = 33/393 (8%)
Query: 176 GASAEGTRRDRLG-SYSGPTSVSRQRVESLRKKRPLFPWFGLDIGGTLVKLVYFEPKDIT 234
GAS G+ D L S + P + +E+ ++ F +DIGG+L KL Y+ T
Sbjct: 5 GASGSGSSGDSLDKSITLPPDEIFRNLENAKR-------FAIDIGGSLTKLAYYS----T 53
Query: 235 AEEEEEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLCGRKGNLHFIRFPTHDMPA 294
+ + +V S K + ++ ++ +++T LHFI+F + A
Sbjct: 54 VQHKVAKVRSFDHSGK----DTEREHEPPYEISVQ-EEIT-----ARLHFIKFENTYIEA 103
Query: 295 FIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDSVGF 354
+ +D ++ V ATGGGAYKF+ L++ K D + CLIKG ++
Sbjct: 104 CLDFIKDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKVDKEDVMTCLIKGCNFVLK--- 160
Query: 355 NGRSQCYYFENPADSEKCQKLPFDLKNP--YPLLLVNIGSGVSILAVYSKDNYKRVTGTS 412
N + + ++ +D E F +P +P LLVNIGSGVSI+ V ++D ++ V G+S
Sbjct: 161 NIPHEAFVYQKDSDPE----FRFQTNHPHIFPYLLVNIGSGVSIVKVETEDRFEWVGGSS 216
Query: 413 LGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASSF 472
+GGGTF+GL LLT F+E L +ASRG + VD LVRD+YGG ++ GL G +ASSF
Sbjct: 217 IGGGTFWGLGALLTKTKKFDELLHLASRGQHSNVDMLVRDVYGGAHQTLGLSGNLIASSF 276
Query: 473 GNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAMR 532
G + + + SKED+A++ L I+N+IG +A + A ++++V F G F+R + + MR
Sbjct: 277 GKSATAD--QEFSKEDMAKSLLHMISNDIGQLACLHARLHSLDRVYFGGFFIRGHPVTMR 334
Query: 533 LLAYALDYWSKGQLKALFSEHEGYFGAVGALLE 565
+ Y+++++SKG+++ALF HEGY GA+GA L+
Sbjct: 335 TITYSINFFSKGEVQALFLRHEGYLGAIGAFLK 367
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.4 bits (93), Expect = 0.004
Identities = 43/155 (27%), Positives = 58/155 (37%), Gaps = 10/155 (6%)
Query: 59 RVREPTGREAFGPSPA-----SSDWLPARWRNGRGGRP--RARLCSGWTAAEEARRNPTL 111
R R P R + SPA S PAR R P R R S A R
Sbjct: 626 RTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRT 685
Query: 112 GGLLGRQRLLLRMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSAS 171
GR R G + R GR+ + + G + + +RR+ S S
Sbjct: 686 PARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNS 745
Query: 172 VPAVGASAEGTRRDRLGSYSGPTSVSRQRVESLRK 206
P + S +RR R S S P S ++ R+ SLR+
Sbjct: 746 SPEMKKSRISSRRSR--SLSSPRSKAKSRL-SLRR 777
Score = 33.9 bits (76), Expect = 0.41
Identities = 51/194 (26%), Positives = 71/194 (36%), Gaps = 25/194 (12%)
Query: 34 IPSSTTLSPPRHDSLSLDGGTVNP---PRVRE--PTGREAFGPSPASSDWLPARWRNGRG 88
+ S + LSP R S S P PR + + E P+P + LP R R+G
Sbjct: 1585 VDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRA---LPRRSRSGSS 1641
Query: 89 GRPRARLCSGWTAAEEARRNPTLGGLLGR-----------QRLLLRMGGGRLGAPMERHG 137
+ R G ++ E + +P R R R R + R
Sbjct: 1642 SKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKA 1701
Query: 138 RASATSVSSAGEQAAGDPEGRRQEPLR-RRASSASVPAVGASAEGTRRDRLGSYSGPTSV 196
R S S S A+ PE R + P R RR+ S S P + +RR R S +
Sbjct: 1702 RLSRRSRS-----ASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTT 1756
Query: 197 SRQRVESLRKKRPL 210
SR+ K R L
Sbjct: 1757 SRRGRSPSPKPRGL 1770
Score = 30.8 bits (68), Expect = 3.5
Identities = 49/182 (26%), Positives = 62/182 (34%), Gaps = 27/182 (14%)
Query: 41 SPPRHDSLSLDGGTVNPPRVREPTGREAFGPSPASSDWLPAR----WRNGRG----GRPR 92
+P R S T R R T + S W +R W R GR R
Sbjct: 476 TPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSR 535
Query: 93 ARLCSGWTAAEEARRNPTLGGLLGRQRLLLRMGGGRLGAPMERHGRASATSVSSAGEQAA 152
+ GW+ + +R GR R R GR H R+ AT S A
Sbjct: 536 SPQRPGWSRSRNTQRR-------GRSRSARR---GR------SHSRSPATRGRSRSRTPA 579
Query: 153 GDPEGRRQEPLRRRASSASVPAVGASAEGT--RRDRLGSYSGPTSVSRQRVESLRKKRPL 210
R + P RRR+ S + P S T RR R S + SR R R+ R
Sbjct: 580 RRGRSRSRTPARRRSRSRT-PTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSR 638
Query: 211 FP 212
P
Sbjct: 639 SP 640
Score = 30.0 bits (66), Expect = 6.0
Identities = 48/184 (26%), Positives = 67/184 (36%), Gaps = 24/184 (13%)
Query: 30 RGTRIPSSTTLSPPRHDSLSLDGGTVNPPRVREPTGREAFGPSPASSDWLPARWRNGRGG 89
R R SS + S R S S T R R +G + P+ S +R R GR
Sbjct: 1787 RRDRSGSSQSTSRRRQRSRSRSRVT---RRRRGGSGYHSRSPARQESSRTSSRRRRGRSR 1843
Query: 90 RP-------RARLCSGWTAAEEARRNP-TLGGLLGRQRLLLRMGGGRLGAPMERHGRASA 141
P R+R +R +P T R L+ R +P+ R S
Sbjct: 1844 TPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSR 1903
Query: 142 TSVSSAGEQAAGDPEGRRQE-----PLRRRASSASVPAVGASAEGTRRDRLGSYSGPTSV 196
TSV+ ++ P RR+ P+ RR S + P T R R S + P +
Sbjct: 1904 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTP--------TTRRRSRSRTPPVTR 1955
Query: 197 SRQR 200
R R
Sbjct: 1956 RRSR 1959
>gi|239755454 PREDICTED: hypothetical protein [Homo sapiens]
Length = 305
Score = 38.5 bits (88), Expect = 0.017
Identities = 57/191 (29%), Positives = 72/191 (37%), Gaps = 38/191 (19%)
Query: 59 RVREPTGREAFGPSPASSDWLPARWRNGRGGRPRARLCSGWTAAE--------------- 103
+V P R A SP WR GR RP R S + E
Sbjct: 107 QVWRPLERRASVASPGEKGECGVPWREGRVWRPLDRRGSVASPGEKGECGVPWREGGVWR 166
Query: 104 --EARRNPTLGGLLGRQRLLLRMGGGRLGAPMERHGRASATSVSSAGEQA-AGDP--EGR 158
E R + G G + R GG + P+ER G SV+S GE+ G P EGR
Sbjct: 167 PLERRASVASPGQKGECGVPWREGG--VWRPLERRG-----SVASPGEKGECGVPWREGR 219
Query: 159 RQEPLRRRASSASVPAVGASAEGTRR-------DRLGSYSGPTSVSRQRVESLRKKRPLF 211
PL RRAS AS G R DR GS + P ++ E + R
Sbjct: 220 VWRPLERRASVASPGQKGECGVPWREGAVWRPLDRRGSVASP----GEKGECGVRWREGR 275
Query: 212 PWFGLDIGGTL 222
W+ LD G++
Sbjct: 276 VWYSLDKRGSV 286
>gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 780
Score = 38.5 bits (88), Expect = 0.017
Identities = 60/199 (30%), Positives = 75/199 (37%), Gaps = 27/199 (13%)
Query: 16 PPSLSSGLHRLLFLRGTRIPSSTTLSPPRHDSLSLDGGTVNPPRVREPTGREAFGPSPAS 75
P GL F GT P S+++ R L L R +EP + + GP S
Sbjct: 189 PSDRRRGLSGWPFSCGTGKPPSSSM---RRSPLGLSSCL----RRKEPLRKTSMGPLGPS 241
Query: 76 SDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRLLLRMGGGRLGAPMER 135
S PA + R R L SG G LLLR G G G P+
Sbjct: 242 SAG-PAFGDSPEMVRVRLPLRSG----------------TGGTGLLLRSGTGGTGLPLRS 284
Query: 136 HGRASATSVSSAGEQ-AAGDPEGRRQEPLRRRASSASVPAVGASAEGTRRDRLGSYSGPT 194
GR ++ A EGRR EPLR SS S AV +A G R S
Sbjct: 285 GGRGLSSPCGDVEWLWAERKREGRRSEPLRPSVSS-SCAAVSDAAPGCRSASWCSCCAKE 343
Query: 195 S-VSRQRVESLRKKRPLFP 212
S S +++ LR+ P P
Sbjct: 344 SRRSSRQLSRLRRSPPTAP 362
>gi|169168296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 38.1 bits (87), Expect = 0.022
Identities = 56/209 (26%), Positives = 75/209 (35%), Gaps = 23/209 (11%)
Query: 12 HWAAP-PSLSSGLHRLLFLRGTRIPSSTTLSP-PRHDSLSLDGGTVNPPRVREPTGREAF 69
H AP P LS G L G + TL PR + V R R P E
Sbjct: 128 HNKAPGPQLSKGQQTLSV--GHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGA 185
Query: 70 GPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRLLLRMGGGRL 129
P P D P + L GW+ R G Q + GGGRL
Sbjct: 186 PPLPGKDDGSPKEAEERARRFRKPLLPPGWSP-----RTTDPG-----QEVQADCGGGRL 235
Query: 130 GAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASA------EGTR 183
+ G + + + + GR Q P R AS++ PA+ + +G
Sbjct: 236 ASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTS--PALTPRSQYPKRPQGPA 293
Query: 184 RDRLGSYSGPTSVSRQRVESLRKKRPLFP 212
R+R GS S P SV+ E R ++P P
Sbjct: 294 RNR-GSCSPPLSVTLAVTEGPRLRKPSAP 321
>gi|169168044 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 38.1 bits (87), Expect = 0.022
Identities = 56/209 (26%), Positives = 75/209 (35%), Gaps = 23/209 (11%)
Query: 12 HWAAP-PSLSSGLHRLLFLRGTRIPSSTTLSP-PRHDSLSLDGGTVNPPRVREPTGREAF 69
H AP P LS G L G + TL PR + V R R P E
Sbjct: 128 HNKAPGPQLSKGQQTLSV--GHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGA 185
Query: 70 GPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRLLLRMGGGRL 129
P P D P + L GW+ R G Q + GGGRL
Sbjct: 186 PPLPGKDDGSPKEAEERARRFRKPLLPPGWSP-----RTTDPG-----QEVQADCGGGRL 235
Query: 130 GAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASA------EGTR 183
+ G + + + + GR Q P R AS++ PA+ + +G
Sbjct: 236 ASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTS--PALTPRSQYPKRPQGPA 293
Query: 184 RDRLGSYSGPTSVSRQRVESLRKKRPLFP 212
R+R GS S P SV+ E R ++P P
Sbjct: 294 RNR-GSCSPPLSVTLAVTEGPRLRKPSAP 321
>gi|169167512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 442
Score = 38.1 bits (87), Expect = 0.022
Identities = 56/209 (26%), Positives = 75/209 (35%), Gaps = 23/209 (11%)
Query: 12 HWAAP-PSLSSGLHRLLFLRGTRIPSSTTLSP-PRHDSLSLDGGTVNPPRVREPTGREAF 69
H AP P LS G L G + TL PR + V R R P E
Sbjct: 211 HNKAPGPQLSKGQQTLSV--GHHADKAVTLGGCPRSTGAAFARPRVAHSRGRPPAEVEGA 268
Query: 70 GPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRLLLRMGGGRL 129
P P D P + L GW+ R G Q + GGGRL
Sbjct: 269 PPLPGKDDGSPKEAEERARRFRKPLLPPGWSP-----RTTDPG-----QEVQADCGGGRL 318
Query: 130 GAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASA------EGTR 183
+ G + + + + GR Q P R AS++ PA+ + +G
Sbjct: 319 ASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTS--PALTPRSQYPKRPQGPA 376
Query: 184 RDRLGSYSGPTSVSRQRVESLRKKRPLFP 212
R+R GS S P SV+ E R ++P P
Sbjct: 377 RNR-GSCSPPLSVTLAVTEGPRLRKPSAP 404
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 37.7 bits (86), Expect = 0.029
Identities = 48/154 (31%), Positives = 59/154 (38%), Gaps = 31/154 (20%)
Query: 53 GTVNP--PRVREPTGREAF-GPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNP 109
GT P PR P R F P PA + PA GRP G A RR+P
Sbjct: 118 GTPPPRCPRTLAPGPRGLFPAPPPAPARTGPAGKAAADRGRP------GPAAGRRVRRSP 171
Query: 110 TLGGLLGRQRLL-----------------LRMGGG-RLGAPMERHGRASATSVSSAGEQA 151
+ L Q L +R+GGG R R GRA+ T G +A
Sbjct: 172 SFPPFLLAQTRLGRTGPLALCLLLLLHGAMRLGGGSREKLACGRAGRAARTGRGEGGRRA 231
Query: 152 AGDPEGRRQEPLRRRASSASVP--AVGASAEGTR 183
+ GRR+ RR + +P A G S GTR
Sbjct: 232 EEEAAGRRRR--RRPGRTRGIPRAAGGLSRAGTR 263
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.037
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 80 PARWRNGRGGRPRARLCSGWTAAEEARRNPTLG--GLLGRQRLLLRMGGGRLGAPMERHG 137
P R R GRPR R +AE L G L R +R G
Sbjct: 216 PPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSS---------RG 266
Query: 138 RASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEGTRRDRLG 188
R +ATSVS+A G G R+ R R A + A SA G +D G
Sbjct: 267 RGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRG 317
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.037
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 80 PARWRNGRGGRPRARLCSGWTAAEEARRNPTLG--GLLGRQRLLLRMGGGRLGAPMERHG 137
P R R GRPR R +AE L G L R +R G
Sbjct: 216 PPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSS---------RG 266
Query: 138 RASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEGTRRDRLG 188
R +ATSVS+A G G R+ R R A + A SA G +D G
Sbjct: 267 RGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRG 317
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.037
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 80 PARWRNGRGGRPRARLCSGWTAAEEARRNPTLG--GLLGRQRLLLRMGGGRLGAPMERHG 137
P R R GRPR R +AE L G L R +R G
Sbjct: 216 PPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSS---------RG 266
Query: 138 RASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEGTRRDRLG 188
R +ATSVS+A G G R+ R R A + A SA G +D G
Sbjct: 267 RGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRG 317
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 36.6 bits (83), Expect = 0.064
Identities = 35/101 (34%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 42 PPRHDSLSLDGGTVNPPRVREPTGREAF---GP-----SPASSDWLPAR-----WRNGRG 88
P R + GG PP R PTGR GP PASS W W G G
Sbjct: 411 PAREGPAAWPGGAPTPPHAR-PTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGG 469
Query: 89 GRPRARLCSGWTAAEEARRNPTLGGL-LGRQRLLLRMGGGR 128
R R R G AR +P L R LLR GR
Sbjct: 470 SRARRRAARGRGCLRSARSSPHARPLGSSRSVRLLRSAAGR 510
>gi|239756566 PREDICTED: hypothetical protein [Homo sapiens]
Length = 214
Score = 36.2 bits (82), Expect = 0.083
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 84 RNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRLLLRMGGGR----LGAPMERHGRA 139
RN GG P+A+ C +AA + + +LGG L + G R ER G
Sbjct: 78 RNTPGGDPKAQACFPTSAANRSFQPRSLGGSLA------GIAGPRPSPCQAHDCERGGGG 131
Query: 140 SATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEG 181
+ ++A +Q P R +PL SA+ P VG A G
Sbjct: 132 RPSHRAAAVDQGRPRPRVPRGQPLPGLHPSAAAPGVGGRASG 173
>gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo
sapiens]
Length = 389
Score = 36.2 bits (82), Expect = 0.083
Identities = 44/133 (33%), Positives = 52/133 (39%), Gaps = 27/133 (20%)
Query: 59 RVREPTGREAFGPSPASSDWLPARWRNGRGGRPRARLCSGWTAAE--------------- 103
+V P R A SP WR GR RP R S + E
Sbjct: 107 QVWRPLERRASVASPGEKGECGVPWREGRVWRPLDRRGSVASPGEKGECGVPWREGGVWR 166
Query: 104 --EARRNPTLGGLLGRQRLLLRMGGGRLGAPMERHGRASATSVSSAGEQA-AGDP--EGR 158
E R + G G + R GG + P+ER G SV+S GE+ G P EGR
Sbjct: 167 PLERRASVASPGQKGECGVPWREGG--VWRPLERRG-----SVASPGEKGECGVPWREGR 219
Query: 159 RQEPLRRRASSAS 171
PL RRAS AS
Sbjct: 220 VWRPLERRASVAS 232
Score = 36.2 bits (82), Expect = 0.083
Identities = 50/183 (27%), Positives = 61/183 (33%), Gaps = 24/183 (13%)
Query: 60 VREPTGREAFGPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEA------RRNPTLGG 113
V P R SP WR GR RP R S + ++ R P
Sbjct: 192 VWRPLERRGSVASPGEKGECGVPWREGRVWRPLERRASVASPGQKGECGVPWREGPVWRP 251
Query: 114 LLGRQRLLLRMGGGRLGAPMERHG-------RASATSVSSAGEQAAGDPEGRRQEPLRRR 166
L R + G G P G RAS S GE EG PL RR
Sbjct: 252 LERRGSVASPGEKGECGVPWTEGGVWRPLERRASVASPGEKGECGVPWTEGGVWRPLERR 311
Query: 167 ASSASVPAVGASAEGTRR-------DRLGSYSGPTSVSRQRVESLRKKRPLFPWFGLDIG 219
AS AS G R DR GS + P ++ E + R W+ LD
Sbjct: 312 ASVASPGEKGECGVPWREGGVWRPLDRRGSVASP----GEKGECGVRWREGRVWYSLDKR 367
Query: 220 GTL 222
G++
Sbjct: 368 GSV 370
>gi|169213922 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 198
Score = 35.8 bits (81), Expect = 0.11
Identities = 47/151 (31%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 68 AFGPSPASSDWLPARWRNGRGGRPRA--RLCSGWTAAE---EARRNPTLGGLLGRQRLLL 122
+F S S LP R P+A R CSGW A E AR P R R+ L
Sbjct: 39 SFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMAL 98
Query: 123 RMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEG- 181
R AP R S +S + RR E R R+SS P++ ++
Sbjct: 99 RPRSAPSRAPAWYTARRFCRSSASRRSRLR---SLRRWEARRTRSSSVLWPSMACTSPRY 155
Query: 182 -TRRDRLGSYSGPTSV--------SRQRVES 203
TRR R S S P+ SR RV S
Sbjct: 156 CTRRPRTSSMSAPSRACAACSSLDSRARVSS 186
>gi|169213920 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 198
Score = 35.8 bits (81), Expect = 0.11
Identities = 47/151 (31%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 68 AFGPSPASSDWLPARWRNGRGGRPRA--RLCSGWTAAE---EARRNPTLGGLLGRQRLLL 122
+F S S LP R P+A R CSGW A E AR P R R+ L
Sbjct: 39 SFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMAL 98
Query: 123 RMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEG- 181
R AP R S +S + RR E R R+SS P++ ++
Sbjct: 99 RPRSAPSRAPAWYTARRFCRSSASRRSRLR---SLRRWEARRTRSSSVLWPSMACTSPRY 155
Query: 182 -TRRDRLGSYSGPTSV--------SRQRVES 203
TRR R S S P+ SR RV S
Sbjct: 156 CTRRPRTSSMSAPSRACAACSSLDSRARVSS 186
>gi|169214343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 198
Score = 35.8 bits (81), Expect = 0.11
Identities = 47/151 (31%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 68 AFGPSPASSDWLPARWRNGRGGRPRA--RLCSGWTAAE---EARRNPTLGGLLGRQRLLL 122
+F S S LP R P+A R CSGW A E AR P R R+ L
Sbjct: 39 SFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMAL 98
Query: 123 RMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEG- 181
R AP R S +S + RR E R R+SS P++ ++
Sbjct: 99 RPRSAPSRAPAWYTARRFCRSSASRRSRLR---SLRRWEARRTRSSSVLWPSMACTSPRY 155
Query: 182 -TRRDRLGSYSGPTSV--------SRQRVES 203
TRR R S S P+ SR RV S
Sbjct: 156 CTRRPRTSSMSAPSRACAACSSLDSRARVSS 186
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 35.8 bits (81), Expect = 0.11
Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 20/175 (11%)
Query: 31 GTRIPSSTTLSPPRHDSLSLDGGTVNPPRVREPTGREAFGPSPASSDWLPA-RWRNGRGG 89
G+R S + P DS S G R+ P P+S L R G G
Sbjct: 767 GSRTCSPAPIPPHTSDSCSKSGAASLGEEARDT-------PQPSSPLVLQVGRPEQGAVG 819
Query: 90 RPRARLCS--GWTAAEEARRNPT--LGGLLGRQRLLLRMGGGRLGAPMERHGRASATSVS 145
R+ CS G A+EA+R P+ L GR G P + +S S
Sbjct: 820 PHRSHCCSQPGTQPAQEAQRGPSPEASWLCGRY-----CPTPPRGRPCPQRRSSSCGSTG 874
Query: 146 SAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEGTRRDRLGSYSGPTSVSRQR 200
S+ + A P G QE R+ P+ G ++ +RR +G +S ++
Sbjct: 875 SSHQSTARGPGGSPQEGTRQ---PGPTPSPGPNSGASRRSSASQGAGSRGLSEEK 926
>gi|154759273 testis specific, 10 interacting protein [Homo sapiens]
Length = 556
Score = 35.8 bits (81), Expect = 0.11
Identities = 42/155 (27%), Positives = 54/155 (34%), Gaps = 23/155 (14%)
Query: 63 PTGREAFGPSPASSDWLPARWRNGRGGRPRARLCSGWTAAEEARRNPTLGGLLGRQRLLL 122
PTG+ G P S LP R R G G ++ AEEA R + G L R R
Sbjct: 184 PTGKGELGSEPPSGLQLPGR-RPGSGSASDKQVQLQSLGAEEAERGLSSGVLPQRPR--- 239
Query: 123 RMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRAS---SASVPAVGASA 179
R S + E EG + P RRRA + AS
Sbjct: 240 ---------------RGSISEEEQFSEATEEAEEGEHRTPCRRRAGCQRKGQISGEEASD 284
Query: 180 EG-TRRDRLGSYSGPTSVSRQRVESLRKKRPLFPW 213
EG + GS ++ R++ R K PW
Sbjct: 285 EGEVQGQSQGSSPSFNNLRRRQWRKTRAKELQGPW 319
>gi|4885323 G protein-coupled receptor 37 [Homo sapiens]
Length = 613
Score = 35.4 bits (80), Expect = 0.14
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 21/180 (11%)
Query: 15 APPSLSSGLHRLLFLRGTRIPSSTTL--SPPRHDSLSLDGGTVNPPRVREPTGREAFGPS 72
AP +L + + RLL L ++ +S+ L +P + L G P V + GR+A+GP
Sbjct: 3 APGALLARMSRLLLLLLLKVSASSALGVAPASRNETCL--GESCAPTVIQRRGRDAWGPG 60
Query: 73 PASSDWLPARWRNGRGGRPRARLCSG--WTAAEEARRNPTLG-----------GLLGRQR 119
++ D L AR G A +G W R+P G G R
Sbjct: 61 NSARDVLRARAPREEQG---AAFLAGPSWDLPAAPGRDPAAGRGAEASAAGPPGPPTRPP 117
Query: 120 LLLRMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAV-GAS 178
R G R P E GR + T++ + + + +G R + R+ SV V GAS
Sbjct: 118 GPWRWKGARGQEPSETLGRGNPTALQLFLQISEEEEKGPRGAGISGRSQEQSVKTVPGAS 177
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 35.4 bits (80), Expect = 0.14
Identities = 34/101 (33%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 42 PPRHDSLSLDGGTVNPPRVREPTGREAF---GP-----SPASSDWLPAR-----WRNGRG 88
P R + GG PP R PTGR GP PASS W W G G
Sbjct: 411 PAREGPAAWPGGAPTPPHAR-PTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGG 469
Query: 89 GRPRARLCSGWTAAEEARRNPTLGGL-LGRQRLLLRMGGGR 128
R R R G AR +P L R LLR G+
Sbjct: 470 SRARRRAARGRGCLRSARSSPHARPLGSSRSVRLLRSAAGK 510
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 35.4 bits (80), Expect = 0.14
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 18/165 (10%)
Query: 59 RVREPTGREAFGPSPASSDWLPARWRNGRG------GRPRARLCSGWTAAEEARRNPTLG 112
R R+ + A P+PA++ P R ++ R + A SG A A +P
Sbjct: 493 RYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDS 552
Query: 113 GLLGRQRLLLRMGGGRLGAPMERHGRASATSVS------SAGEQAAGDPEGRRQEPLRRR 166
+ R R G + R R+ + S S S + G R +E RRR
Sbjct: 553 K---KHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRR 609
Query: 167 ASSASVPAVGASAEGTRRDR-LGSY--SGPTSVSRQRVESLRKKR 208
SAS P +S+ +RR+R G + G + ++R S +KR
Sbjct: 610 RRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKR 654
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 34.3 bits (77), Expect = 0.32
Identities = 51/202 (25%), Positives = 73/202 (36%), Gaps = 31/202 (15%)
Query: 53 GTVNPPRVREPTGREAFGPSPAS-SDWL---PARWRNGRGGRPRARLCSGWTAAEEARRN 108
G P V+EP G A P+ A +D L P G P A L + A + A++
Sbjct: 796 GPGEPVEVKEPPGLPAKPPASAQPTDELLRHPVTGEVVERGSPMALLLA---ARQRAQKG 852
Query: 109 PTLGGLLGRQRLLLRMGGGRLGAPMERHGRASATSVSSAGEQAAGDP---------EGRR 159
++G LGR L G+ + +A A+S S Q + E +
Sbjct: 853 RSVGAALGRSSLP--------GSLRDHSHQAEASSDSIFHSQGTPNSFTVVPKLPKEAEK 904
Query: 160 QEPLRRRASSASVPAVGASAEGTRRDRLGSYSGPTSVSRQRVESLRKKRPLFPWFGLDIG 219
PL + P +G AEGT R +++ P + E + L G
Sbjct: 905 DSPLTTEIPNKWGPRLGRDAEGTELSRRHNWTKPEPQAPVAWERVAPS-------NLPQG 957
Query: 220 GTLVKLVYFEPKDITAEEEEEE 241
L K P EEEEE
Sbjct: 958 HPLPKSFSSPPSPSNKREEEEE 979
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,978,156
Number of Sequences: 37866
Number of extensions: 1165483
Number of successful extensions: 3764
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 3683
Number of HSP's gapped (non-prelim): 132
length of query: 570
length of database: 18,247,518
effective HSP length: 108
effective length of query: 462
effective length of database: 14,157,990
effective search space: 6540991380
effective search space used: 6540991380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.