Guide to the Human Genome
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Name: PANK4 Sequence: fasta or formatted (773aa) NCBI GI: 8922665
Description:

pantothenate kinase 4

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         62           2
 C cysteine            1.6         12           1
 D aspartate           6.0         46           2
 E glutamate           7.2         56           2
 F phenylalanine       5.0         39           2
 G glycine             8.0         62           3
 H histidine           2.8         22           1
 I isoleucine          4.4         34           2
 K lysine              5.6         43           2
 L leucine            11.8         91           3
 M methionine          1.3         10           1
 N asparagine          3.2         25           1
 P proline             4.0         31           2
 Q glutamine           3.1         24           2
 R arginine            5.7         44           1
 S serine              7.1         55           3
 T threonine           4.1         32           1
 V valine              6.9         53           2
 W tryptophan          1.3         10           1
 Y tyrosine            2.8         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pantothenate kinase 4 
PANK1                 0.121   pantothenate kinase 1 isoform beta 
PANK1                 0.121   pantothenate kinase 1 isoform alpha 
PANK3                 0.120   pantothenate kinase 3 
PANK2                 0.120   pantothenate kinase 2 isoform 1 preproprotein 
PANK2                 0.109   pantothenate kinase 2 isoform 2 
PANK2                 0.109   pantothenate kinase 2 isoform 2 
PANK1                 0.065   pantothenate kinase 1 isoform gamma 
ALS2                  0.006   alsin isoform 2 
ALS2                  0.006   alsin isoform 1 
LRPPRC                0.005   leucine-rich PPR motif-containing protein 
IQGAP2                0.005   IQ motif containing GTPase activating protein 2 [Ho...
B3GALNT1              0.003   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.003   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.003   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.003   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.003   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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