Guide to the Human Genome
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Name: PANK2 Sequence: fasta or formatted (279aa) NCBI GI: 24430175
Description:

pantothenate kinase 2 isoform 2

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt mRNA [279aa] pantothenate kinase 2 isoform 2
alt prot [570aa] pantothenate kinase 2 isoform 1 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         20           1
 C cysteine            3.2          9           2
 D aspartate           5.4         15           1
 E glutamate           5.4         15           2
 F phenylalanine       6.1         17           2
 G glycine            10.0         28           3
 H histidine           0.7          2           1
 I isoleucine          5.7         16           1
 K lysine              6.1         17           1
 L leucine            12.2         34           3
 M methionine          2.5          7           2
 N asparagine          5.0         14           2
 P proline             2.5          7           1
 Q glutamine           2.5          7           1
 R arginine            3.9         11           1
 S serine              6.5         18           2
 T threonine           5.0         14           2
 V valine              5.0         14           2
 W tryptophan          0.7          2           1
 Y tyrosine            4.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pantothenate kinase 2 isoform 2 
PANK2                 1.000   pantothenate kinase 2 isoform 2 
PANK2                 1.000   pantothenate kinase 2 isoform 1 preproprotein 
PANK3                 0.832   pantothenate kinase 3 
PANK1                 0.828   pantothenate kinase 1 isoform beta 
PANK1                 0.828   pantothenate kinase 1 isoform alpha 
PANK1                 0.447   pantothenate kinase 1 isoform gamma 
PANK4                 0.309   pantothenate kinase 4 
TRRAP                 0.013   transformation/transcription domain-associated protei...
LOC100292533          0.007   PREDICTED: similar to zinc finger protein 564 [Homo...
LOC100290363          0.007   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.007   PREDICTED: hypothetical protein XP_002343682 
EPHA10                0.007   EPH receptor A10 isofom 3 
BLOC1S1               0.006   biogenesis of lysosome-related organelles complex-1, ...
VEPH1                 0.006   ventricular zone expressed PH domain homolog 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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