Guide to the Human Genome
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Name: PANK3 Sequence: fasta or formatted (370aa) NCBI GI: 13375789
Description:

pantothenate kinase 3

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         23           1
 C cysteine            1.9          7           1
 D aspartate           5.4         20           2
 E glutamate           6.5         24           3
 F phenylalanine       5.9         22           1
 G glycine             9.5         35           3
 H histidine           1.6          6           1
 I isoleucine          4.6         17           1
 K lysine              6.8         25           2
 L leucine            11.9         44           2
 M methionine          2.2          8           1
 N asparagine          4.6         17           2
 P proline             3.0         11           1
 Q glutamine           2.2          8           1
 R arginine            4.3         16           2
 S serine              7.0         26           2
 T threonine           5.4         20           1
 V valine              6.2         23           2
 W tryptophan          0.8          3           1
 Y tyrosine            4.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pantothenate kinase 3 
PANK2                 0.838   pantothenate kinase 2 isoform 1 preproprotein 
PANK1                 0.804   pantothenate kinase 1 isoform beta 
PANK1                 0.798   pantothenate kinase 1 isoform alpha 
PANK2                 0.624   pantothenate kinase 2 isoform 2 
PANK2                 0.624   pantothenate kinase 2 isoform 2 
PANK1                 0.588   pantothenate kinase 1 isoform gamma 
PANK4                 0.255   pantothenate kinase 4 
LOC100294439          0.010   PREDICTED: similar to Os05g0242100 
LOC100293615          0.007   PREDICTED: similar to Os05g0242100 
LOC100288312          0.007   PREDICTED: hypothetical protein XP_002343263 
TESC                  0.007   tescalcin 
TRRAP                 0.006   transformation/transcription domain-associated protei...
DUSP27                0.006   dual specificity phosphatase 27 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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