BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|85815829 SH3-domain binding protein 1 [Homo sapiens] (701 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 1382 0.0 gi|54860105 nadrin isoform 2 [Homo sapiens] 503 e-142 gi|54860079 nadrin isoform 1 [Homo sapiens] 485 e-137 gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 464 e-130 gi|23510413 sorting nexin 26 [Homo sapiens] 121 2e-27 gi|156071465 Rho GTPase activating protein 4 [Homo sapiens] 112 2e-24 gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens] 109 8e-24 gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens] 109 8e-24 gi|229094128 active breakpoint cluster region-related protein i... 108 2e-23 gi|38679957 active breakpoint cluster region-related protein is... 108 2e-23 gi|38679954 active breakpoint cluster region-related protein is... 108 2e-23 gi|34013590 Rho GTPase activating protein 2 [Homo sapiens] 106 6e-23 gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo sa... 106 8e-23 gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sa... 106 8e-23 gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sa... 106 8e-23 gi|21314774 T-cell activation Rho GTPase-activating protein isof... 105 1e-22 gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 105 1e-22 gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens] 103 4e-22 gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens] 103 4e-22 gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens] 102 9e-22 gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens] 102 9e-22 gi|4757980 beta chimerin isoform 2 [Homo sapiens] 102 2e-21 gi|91106928 beta chimerin isoform 1 [Homo sapiens] 102 2e-21 gi|4757766 Rho GTPase activating protein 1 [Homo sapiens] 101 2e-21 gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sap... 101 2e-21 gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sap... 101 2e-21 gi|26986534 Rho GTPase activating protein 12 [Homo sapiens] 100 8e-21 gi|194272142 myosin IXB isoform 2 [Homo sapiens] 99 2e-20 gi|33356170 myosin IXB isoform 1 [Homo sapiens] 99 2e-20 gi|50843948 Rho GTPase activating protein 10 [Homo sapiens] 98 2e-20 >gi|85815829 SH3-domain binding protein 1 [Homo sapiens] Length = 701 Score = 1382 bits (3576), Expect = 0.0 Identities = 701/701 (100%), Positives = 701/701 (100%) Query: 1 MMKRQLHRMRQLAQTGSLGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQ 60 MMKRQLHRMRQLAQTGSLGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQ Sbjct: 1 MMKRQLHRMRQLAQTGSLGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQ 60 Query: 61 SGADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLE 120 SGADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLE Sbjct: 61 SGADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLE 120 Query: 121 RDVLQPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSSQGLGGSPGSHS 180 RDVLQPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSSQGLGGSPGSHS Sbjct: 121 RDVLQPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSSQGLGGSPGSHS 180 Query: 181 HTTMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRR 240 HTTMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRR Sbjct: 181 HTTMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRR 240 Query: 241 SLSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMML 300 SLSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMML Sbjct: 241 SLSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMML 300 Query: 301 LSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELPEPLM 360 LSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELPEPLM Sbjct: 301 LSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELPEPLM 360 Query: 361 TFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTP 420 TFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTP Sbjct: 361 TFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTP 420 Query: 421 SNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGL 480 SNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGL Sbjct: 421 SNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGL 480 Query: 481 FSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPP 540 FSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPP Sbjct: 481 FSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPP 540 Query: 541 RPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPG 600 RPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPG Sbjct: 541 RPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPG 600 Query: 601 TPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNP 660 TPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNP Sbjct: 601 TPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNP 660 Query: 661 AQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASETN 701 AQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASETN Sbjct: 661 AQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASETN 701 >gi|54860105 nadrin isoform 2 [Homo sapiens] Length = 803 Score = 503 bits (1294), Expect = e-142 Identities = 318/774 (41%), Positives = 435/774 (56%), Gaps = 109/774 (14%) Query: 2 MKRQLHRMRQLAQTGSLGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQS 61 MK+Q +RM+QLA ++GR +T E L EDLLQ+E+RL+ + H+ HKRL AC QGQ Sbjct: 1 MKKQFNRMKQLANQ-TVGRAEKT-EVLSEDLLQIERRLDTVRSICHHSHKRLVACFQGQH 58 Query: 62 GADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLER 121 G D ++R KKLPL AL+ M E+ +L+ DS +GK LE +NQLA L++ E+ +E+ Sbjct: 59 GTDAERRHKKLPLTALAQNMQEASTQLE-DSLLGKMLETCGDAENQLALELSQHEVFVEK 117 Query: 122 DVLQPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSS-QGLGGSPGSHS 180 +++ PL ++E E+P I K +K L +LV DW+++++R +QA K+SG++ QGL Sbjct: 118 EIVDPLYGIAEVEIPNIQKQRKQLARLVLDWDSVRARWNQAHKSSGTNFQGL-------- 169 Query: 181 HTTMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRR 240 +K++TLKEE +E KVEQC+D+ AD+Y+F+ KE Y +F+ LLE QADYHR+ Sbjct: 170 ----PSKIDTLKEEMDEAGNKVEQCKDQLAADMYNFMAKEGEYGKFFVTLLEAQADYHRK 225 Query: 241 SLSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMML 300 +L+ L+ L E+R + + P+ +G L HL+ GREIALPIEACVM+L Sbjct: 226 ALAVLEKTLPEMRAHQDKWAEKPA---------FGTPLEEHLKRSGREIALPIEACVMLL 276 Query: 301 LSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELPEPLM 360 L GMKEEGLFR+ AGAS LK+LK + L+EF SDPHAVAGALKSYLRELPEPLM Sbjct: 277 LETGMKEEGLFRIGAGASKLKKLKAALDCSTSHLDEFYSDPHAVAGALKSYLRELPEPLM 336 Query: 361 TFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTP 420 TF+LY++W + AS+++ +LQ L C +LPP+N N RYL+KFLA+LA+ +VNKMTP Sbjct: 337 TFNLYEEWTQVASVQDQDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLAQTSDVNKMTP 396 Query: 421 SNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGL 480 SNIAIVLGPNLLW EG A++ AA +S+ VV V+E +IQ AD FP ++ FNVS Sbjct: 397 SNIAIVLGPNLLW-ARNEGTLAEMAAA--TSVHVVAVIEPIIQHADWFFPEEVEFNVSEA 453 Query: 481 FSAVTL----------QDTVSDRLASEELPSTAV--------PTPATTPAPAPAPAPAPA 522 F +T D+ S L + S AV +P P A PAP Sbjct: 454 FVPLTTPSSNHSFHTGNDSDSGTLERKRPASMAVMEGDLVKKESPPKPKDPVSAAVPAPG 513 Query: 523 PALASAATKERTESEVPPRPASPKVTRSPPETAA--PVEDMARRTKRPAPA--RPTMPPP 578 + A+ +++ S +++ P AA + R K+PAPA +P PPP Sbjct: 514 RNNSQIAS---GQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPP 570 Query: 579 QVSGSRSS-----------------PPAPPL-----PPGSGSPGTPQALPRRLVG--SSL 614 G +SS P+PP PPG S + + PRR S + Sbjct: 571 GHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPI 630 Query: 615 RAPTVPPPLPPT--------------PPQPARRQSRRSPASPS---PASPGPASPSPVSL 657 +AP PPP PPT PP P S PS P +P P S P+ Sbjct: 631 QAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGK 690 Query: 658 SNPAQVDLGAATAEGGAPEAIS----------GVPTP---PAIPPQPRPRSLAS 698 NP+ T GG PE VP P P++PP P+P + S Sbjct: 691 QNPSLP--APQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHS 742 Score = 50.4 bits (119), Expect = 5e-06 Identities = 55/224 (24%), Positives = 71/224 (31%), Gaps = 56/224 (25%) Query: 491 SDRLASEELPSTAVPTPATT------PAPAPAPAPAPAPALASAATKERTESEVPP-RPA 543 S +L+ + + A P+P T PAPAP P P + T P P Sbjct: 532 SHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPK 591 Query: 544 SPKVTRSPP--ETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLP-------- 593 P + SPP T P + ++ AP R + + PP PP Sbjct: 592 PPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTK 651 Query: 594 PGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPP------------------------- 628 P S P P ALP L P+ PP PTPP Sbjct: 652 PNSQGPPNPMALPSE---HGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPET 708 Query: 629 -----------QPARRQSRRSPASPSPASPGPASPSPVSLSNPA 661 +P + R P P PG S SL+N A Sbjct: 709 AQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTA 752 Score = 35.8 bits (81), Expect = 0.14 Identities = 28/117 (23%), Positives = 39/117 (33%), Gaps = 14/117 (11%) Query: 500 PSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAP-- 557 P+ A P T P P P P+ T + P P++P + + P AP Sbjct: 641 PTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQT 700 Query: 558 --------VEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALP 606 + A RP P +P P+ S PP PP +G P Sbjct: 701 LAGGNPETAQPHAGTLPRPRP----VPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAP 753 Score = 31.6 bits (70), Expect = 2.6 Identities = 23/77 (29%), Positives = 26/77 (33%), Gaps = 21/77 (27%) Query: 500 PSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKV--------TRSP 551 P TA P T P P P P P P+ VPP P P V T + Sbjct: 706 PETAQPHAGTLPRPRPVPKPRNRPS-------------VPPPPQPPGVHSAGDSSLTNTA 752 Query: 552 PETAAPVEDMARRTKRP 568 P + V D R P Sbjct: 753 PTASKIVTDSNSRVSEP 769 >gi|54860079 nadrin isoform 1 [Homo sapiens] Length = 881 Score = 485 bits (1249), Expect = e-137 Identities = 328/849 (38%), Positives = 443/849 (52%), Gaps = 181/849 (21%) Query: 2 MKRQLHRMRQLAQTGSLGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQS 61 MK+Q +RM+QLA ++GR +T E L EDLLQ+E+RL+ + H+ HKRL AC QGQ Sbjct: 1 MKKQFNRMKQLANQ-TVGRAEKT-EVLSEDLLQIERRLDTVRSICHHSHKRLVACFQGQH 58 Query: 62 GADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLER 121 G D ++R KKLPL AL+ M E+ +L+ DS +GK LE +NQLA L++ E+ +E+ Sbjct: 59 GTDAERRHKKLPLTALAQNMQEASTQLE-DSLLGKMLETCGDAENQLALELSQHEVFVEK 117 Query: 122 DVLQPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSS-QGLGGSPGSHS 180 +++ PL ++E E+P I K +K L +LV DW+++++R +QA K+SG++ QGL Sbjct: 118 EIVDPLYGIAEVEIPNIQKQRKQLARLVLDWDSVRARWNQAHKSSGTNFQGL-------- 169 Query: 181 HTTMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRR 240 +K++TLKEE +E KVEQC+D+ AD+Y+F+ KE Y +F+ LLE QADYHR+ Sbjct: 170 ----PSKIDTLKEEMDEAGNKVEQCKDQLAADMYNFMAKEGEYGKFFVTLLEAQADYHRK 225 Query: 241 SLSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMML 300 +L+ L+ L E+R + + P+ +G L HL+ GREIALPIEACVM+L Sbjct: 226 ALAVLEKTLPEMRAHQDKWAEKPA---------FGTPLEEHLKRSGREIALPIEACVMLL 276 Query: 301 LSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELPEPLM 360 L GMKEEGLFR+ AGAS LK+LK + L+EF SDPHAVAGALKSYLRELPEPLM Sbjct: 277 LETGMKEEGLFRIGAGASKLKKLKAALDCSTSHLDEFYSDPHAVAGALKSYLRELPEPLM 336 Query: 361 TFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTP 420 TF+LY++W + AS+++ +LQ L C +LPP+N N RYL+KFLA+LA+ +VNKMTP Sbjct: 337 TFNLYEEWTQVASVQDQDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLAQTSDVNKMTP 396 Query: 421 SNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGL 480 SNIAIVLGPNLLW EG A++ AA +S+ VV V+E +IQ AD FP ++ FNVS Sbjct: 397 SNIAIVLGPNLLW-ARNEGTLAEMAAA--TSVHVVAVIEPIIQHADWFFPEEVEFNVSEA 453 Query: 481 FSAVTL----------QDTVSDRLASEELPSTAV-------------------------- 504 F +T D+ S L + S AV Sbjct: 454 FVPLTTPSSNHSFHTGNDSDSGTLERKRPASMAVMEGDLVKKESFGVKLMDFQAHRRGGT 513 Query: 505 ---------------PTPATTPAPA-PAPAPAPAPA---------LASAATKERTESE-- 537 PT +T PA P P P + A +SA E+ S Sbjct: 514 LNRKHISPAFQPPLPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILEQGPSPGD 573 Query: 538 -VPPRPASPKVTRSP---------------PETAAPVEDMA----------------RRT 565 PP+P P P P+ AA ++ R Sbjct: 574 GSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAV 633 Query: 566 KRPAPA--RPTMPPPQVSGSRSS-----------------PPAPPL-----PPGSGSPGT 601 K+PAPA +P PPP G +SS P+PP PPG S + Sbjct: 634 KKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPS 693 Query: 602 PQALPRRLVG--SSLRAPTVPPPLPPT--------------PPQPARRQSRRSPASPS-- 643 + PRR S ++AP PPP PPT PP P S PS Sbjct: 694 QLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHT 753 Query: 644 -PASPGPASPSPVSLSNPAQVDLGAATAEGGAPEAIS----------GVPTP---PAIPP 689 P +P P S P+ NP+ T GG PE VP P P++PP Sbjct: 754 PPQTPTPPSTPPLGKQNPSLP--APQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPP 811 Query: 690 QPRPRSLAS 698 P+P + S Sbjct: 812 PPQPPGVHS 820 Score = 50.4 bits (119), Expect = 5e-06 Identities = 55/224 (24%), Positives = 71/224 (31%), Gaps = 56/224 (25%) Query: 491 SDRLASEELPSTAVPTPATT------PAPAPAPAPAPAPALASAATKERTESEVPP-RPA 543 S +L+ + + A P+P T PAPAP P P + T P P Sbjct: 610 SHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPK 669 Query: 544 SPKVTRSPP--ETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLP-------- 593 P + SPP T P + ++ AP R + + PP PP Sbjct: 670 PPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTK 729 Query: 594 PGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPP------------------------- 628 P S P P ALP L P+ PP PTPP Sbjct: 730 PNSQGPPNPMALPSE---HGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPET 786 Query: 629 -----------QPARRQSRRSPASPSPASPGPASPSPVSLSNPA 661 +P + R P P PG S SL+N A Sbjct: 787 AQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTA 830 Score = 31.6 bits (70), Expect = 2.6 Identities = 23/77 (29%), Positives = 26/77 (33%), Gaps = 21/77 (27%) Query: 500 PSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKV--------TRSP 551 P TA P T P P P P P P+ VPP P P V T + Sbjct: 784 PETAQPHAGTLPRPRPVPKPRNRPS-------------VPPPPQPPGVHSAGDSSLTNTA 830 Query: 552 PETAAPVEDMARRTKRP 568 P + V D R P Sbjct: 831 PTASKIVTDSNSRVSEP 847 >gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] Length = 818 Score = 464 bits (1193), Expect = e-130 Identities = 295/737 (40%), Positives = 413/737 (56%), Gaps = 75/737 (10%) Query: 2 MKRQLHRMRQLAQTGSLGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQS 61 MK+Q +RMRQLA ++GR +T E L EDLLQVE+RLE K+ +H+ HK+L ACLQGQ Sbjct: 1 MKKQFNRMRQLANQ-TVGRAEKT-EVLSEDLLQVEKRLELVKQVSHSTHKKLTACLQGQQ 58 Query: 62 GADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLER 121 GA+ DKR KKLPL L+ + E L D+ +GK L++ +++LA+ L FE+ +ER Sbjct: 59 GAEADKRSKKLPLTTLAQCLMEGSAILGDDTLLGKMLKLCGETEDKLAQELIHFELQVER 118 Query: 122 DVLQPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSSQGLGGSPGSHSH 181 DV++PL L+E E+P I K +K L KLV D ++ ++R Q +K+SG S L + Sbjct: 119 DVIEPLFLLAEVEIPNIQKQRKHLAKLVLDMDSSRTRWQQTSKSSGLSSSLQPAGA---- 174 Query: 182 TTMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRRS 241 K + L+EE EE +VE CRD+ AD+Y FV KE YANYF L+E+QA+YHR+S Sbjct: 175 -----KADALREEMEEAANRVEICRDQLSADMYSFVAKEIDYANYFQTLIEVQAEYHRKS 229 Query: 242 LSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMMLL 301 L+ L L +++ PS +G L HL GREIA PIEACV MLL Sbjct: 230 LTLLQAVLPQIKAQQEAWVEKPS---------FGKPLEEHLTISGREIAFPIEACVTMLL 280 Query: 302 SEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELPEPLMT 361 GM+EEGLFR+A AS LK+LK + ++E+ +DPHA+AGALKSYLRELPEPLMT Sbjct: 281 ECGMQEEGLFRVAPSASKLKKLKAALDCCVVDVQEYSADPHAIAGALKSYLRELPEPLMT 340 Query: 362 FDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTPS 421 F+LYD+W++A++++E +LQAL C +LP N +N+RYL+KFL++L+E Q+VNKMTPS Sbjct: 341 FELYDEWIQASNVQEQDKKLQALWNACEKLPKANHNNIRYLIKFLSKLSEYQDVNKMTPS 400 Query: 422 NIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGLF 481 N+AIVLGPNLLW P+ EG+ ++ + S+Q+VG++E +IQ AD FPG+I FN++G + Sbjct: 401 NMAIVLGPNLLW-PQAEGNITEM--MTTVSLQIVGIIEPIIQHADWFFPGEIEFNITGNY 457 Query: 482 SAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAP------------------ 523 S + +++P+P PA P A P Sbjct: 458 G--------SPVHVNHNANYSSMPSPDMDPADRRQPEQARRPLSVATDNMMLEFYKKDGL 509 Query: 524 -ALASAATKERTESEVPPRPASP--KVTRSPP--ETAAPVEDMARRTKRPAPARPTMPPP 578 + S + + V R +S KV+ +PP + AP ++A P P +P P Sbjct: 510 RKIQSMGVRVMDTNWVARRGSSAGRKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSP- 568 Query: 579 QVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRS 638 + SP L PG T ++ + +P QP + + Sbjct: 569 --AAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQP 626 Query: 639 PASPSPASPGPASPSPVSLSN--------PAQVDLG----AATAEGGAPEAISGVPTPPA 686 ASPSP+ P PA SP +L P +V G A G P +S PTPP+ Sbjct: 627 GASPSPSQP-PADQSPHTLRKVSKKLAPIPPKVPFGQPGAMADQSAGQPSPVSLSPTPPS 685 Query: 687 IP-----PQPRPRSLAS 698 P P+ SLAS Sbjct: 686 TPSPYGLSYPQGYSLAS 702 Score = 43.9 bits (102), Expect = 5e-04 Identities = 47/181 (25%), Positives = 65/181 (35%), Gaps = 22/181 (12%) Query: 464 SADTLFPGDINFNVSGLFSAVTLQDTVSDRLASEELPSTAVPT------PATTPAPAPAP 517 +A L P + ++ T +S A + P ++ T P P P Sbjct: 569 AAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGA 628 Query: 518 APAPA--PALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTM 575 +P+P+ PA S T + ++ P P PKV P A +P P+ Sbjct: 629 SPSPSQPPADQSPHTLRKVSKKLAPIP--PKVPFGQPGAMADQSAGQPSPVSLSPTPPST 686 Query: 576 PPPQ----------VSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPP 625 P P SG S APPL S S T R + PT+PPP PP Sbjct: 687 PSPYGLSYPQGYSLASGQLSPAAAPPL--ASPSVFTSTLSKSRPTPKPRQRPTLPPPQPP 744 Query: 626 T 626 T Sbjct: 745 T 745 Score = 42.7 bits (99), Expect = 0.001 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 17/115 (14%) Query: 490 VSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTR 549 ++D+ A + P + PTP +TP+P P S A+ + + + PP ASP V Sbjct: 666 MADQSAGQPSPVSLSPTPPSTPSPYGLSYPQGY----SLASGQLSPAAAPPL-ASPSVFT 720 Query: 550 SPPETAAPVEDMARRTKRPAPARPTMPPPQ---VSGSRSSPPAPPLPPGSG-SPG 600 S + P T +P RPT+PPPQ V+ S SSP + P G SPG Sbjct: 721 STLSKSRP-------TPKPRQ-RPTLPPPQPPTVNLSASSPQSTEAPMLDGMSPG 767 >gi|23510413 sorting nexin 26 [Homo sapiens] Length = 1126 Score = 121 bits (304), Expect = 2e-27 Identities = 127/477 (26%), Positives = 178/477 (37%), Gaps = 94/477 (19%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASD- 330 RV+G L HL G+++ + C + + G+ + G++RL+ +S ++RL+ S+ Sbjct: 311 RVFGCDLGEHLSNSGQDVPQVLRCCSEFIEAHGVVD-GIYRLSGVSSNIQRLRHEFDSER 369 Query: 331 --PHSLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVC 388 S F D H+V+ K Y RELP PL+T+ LY + A S+ RL + +V Sbjct: 370 IPELSGPAFLQDIHSVSSLCKLYFRELPNPLLTYQLYGKFSEAMSVPGEEERLVRVHDVI 429 Query: 389 SRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKE----GDQAQL 444 +LPP + L YL++ LAR+A M N+AIV PNLL E E G A Sbjct: 430 QQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRSMELESVGMGGAAAF 489 Query: 445 DAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGLFSAVTLQDTVSDRLASEELPSTAV 504 V S+ VVE L+ D LF F +GL + + Sbjct: 490 REVRVQSV----VVEFLLTHVDVLFSD--TFTSAGL----------------DPAGRCLL 527 Query: 505 PTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARR 564 P P + P+ L A + + P P +PK SP E +R Sbjct: 528 PRPKSLAGSCPS---TRLLTLEEAQARTQGRLGTPTEPTTPKAPASPAERRKGERGEKQR 584 Query: 565 --------------------TKRPAP-ARPTMPPPQVSGSR----------------SSP 587 K+P P T PPQ SGSR S Sbjct: 585 KPGGSSWKTFFALGRGPSVPRKKPLPWLGGTRAPPQPSGSRPDTVTLRSAKSEESLSSQA 644 Query: 588 PAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVP-------PPLPPTPPQPARRQSRRSPA 640 L G+P + P G SLR +P PL Q + R + Sbjct: 645 SGAELLGAGGAPASATPTPALSPGRSLRPHLIPLLLRGAEAPLTDACQQEMCSKLRGAQG 704 Query: 641 SPSPASPGPASPSPVSLSNPAQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPRSLA 697 P P P P+SL P GGAP P PP P + +LA Sbjct: 705 PLGPDMESPLPPPPLSLLRP-----------GGAP------PPPPKNPARLMALALA 744 Score = 44.7 bits (104), Expect = 3e-04 Identities = 58/193 (30%), Positives = 78/193 (40%), Gaps = 34/193 (17%) Query: 498 ELPSTAVPTPATTPAPAPAP---APAPAPALAS--AATKERTESEVPP--RPASPK-VTR 549 + P A +P + P+ P P +PAP L K PP +P+SP V R Sbjct: 850 DAPEAAAQSPCSVPSQVPTPGFFSPAPRECLPPFLGVPKPGLYPLGPPSFQPSSPAPVWR 909 Query: 550 SPPETAAPVE---------------DMARRTKRPAPARPTMPPPQVSGSRS----SPPAP 590 S AP++ + T+ +P R +MPP +++ S SPP Sbjct: 910 SSLGPPAPLDRGENLYYEIGASEGSPYSGPTRSWSPFR-SMPPDRLNASYGMLGQSPPLH 968 Query: 591 PLPPGSGS-PGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGP 649 P S P P P +G S AP P PTPP+P P PSPAS Sbjct: 969 RSPDFLLSYPPAPSCFPPDHLGYS--APQ-HPARRPTPPEPLYVNLALGPRGPSPASSSS 1025 Query: 650 ASP--SPVSLSNP 660 +SP P S S+P Sbjct: 1026 SSPPAHPRSRSDP 1038 Score = 44.3 bits (103), Expect = 4e-04 Identities = 56/212 (26%), Positives = 74/212 (34%), Gaps = 29/212 (13%) Query: 498 ELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAP 557 E P P P AP P P L + A ER + +V + + + +PP + +P Sbjct: 711 ESPLPPPPLSLLRPGGAPPPPPKNPARLMALALAERAQ-QVAEQQSQQECGGTPPASQSP 769 Query: 558 VEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAP 617 R P SGS PP PG+ PG P LPR+ SL Sbjct: 770 FH-------RSLSLEVGGEPLGTSGS-GPPPNSLAHPGAWVPGPPPYLPRQQSDGSL--- 818 Query: 618 TVPPPLPPTPPQPARRQSRRSPASPSPA---------SPGPASPSPVSLSNPAQVDLGAA 668 L P R+ R PA S +P A+ SP S+ + + Sbjct: 819 -----LRSQRPMGTSRRGLRGPAQVSAQLRAGGGGRDAPEAAAQSPCSVPSQVPTPGFFS 873 Query: 669 TAEGGAPEAISGVPTP---PAIPPQPRPRSLA 697 A GVP P P PP +P S A Sbjct: 874 PAPRECLPPFLGVPKPGLYPLGPPSFQPSSPA 905 Score = 42.4 bits (98), Expect = 0.001 Identities = 46/172 (26%), Positives = 63/172 (36%), Gaps = 28/172 (16%) Query: 539 PPRPASPKVTRS--PPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGS 596 PP SP S P + P + + + RPT P P P P P S Sbjct: 965 PPLHRSPDFLLSYPPAPSCFPPDHLGYSAPQHPARRPTPPEPLYVNLALGPRGPS--PAS 1022 Query: 597 GSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPS--PASPGPASP-- 652 S +P A PR + P PP P P ++++ P +P P GP P Sbjct: 1023 SSSSSPPAHPR----------SRSDPGPPVPRLPQKQRAPWGPRTPHRVPGPWGPPEPLL 1072 Query: 653 ----SPVSLSNPAQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPR-SLASE 699 +P + ++ G+ GG +G P PP P P SL SE Sbjct: 1073 LYRAAPPAYGRGGELHRGSLYRNGGQRGEGAGPP-----PPYPTPSWSLHSE 1119 Score = 30.4 bits (67), Expect = 5.8 Identities = 31/129 (24%), Positives = 42/129 (32%), Gaps = 30/129 (23%) Query: 515 PAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPT 574 PAP+ P L +A + PP P + P + P+PA + Sbjct: 979 PAPSCFPPDHLGYSAPQHPARRPTPPEPLYVNLALGP--------------RGPSPASSS 1024 Query: 575 MPPPQVSGSRSSPPAPP---LPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPA 631 P S P PP LP +P P+ P R+ G P PP+P Sbjct: 1025 SSSPPAHPRSRSDPGPPVPRLPQKQRAPWGPRT-PHRVPG------------PWGPPEPL 1071 Query: 632 RRQSRRSPA 640 PA Sbjct: 1072 LLYRAAPPA 1080 >gi|156071465 Rho GTPase activating protein 4 [Homo sapiens] Length = 946 Score = 112 bits (279), Expect = 2e-24 Identities = 102/447 (22%), Positives = 182/447 (40%), Gaps = 28/447 (6%) Query: 80 TMAESFKELDPDSSMGKALEMSCAI-------------QNQLARILAEFEMTLERDVLQP 126 ++ E+ + LDP K LE+ + +++A I E E+ RD + P Sbjct: 304 SLEEAVEALDPPGDKAKVLEVHATVFCPPLRFDYHPHDGDEVAEICVEMEL---RDEILP 360 Query: 127 LSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSSQGLGGSPGSHSHTTMAN 186 ++ + L + + K TLK+ L + S G S +T + Sbjct: 361 RAQNIQSRLDRQTIETEEVNK------TLKATLQALLEVVASDDGDVLDSFQTSPSTESL 414 Query: 187 KVETLKEEEEELKRKVEQCRDE---YLADLYHFVTKEDSYANYFIRLLEIQADYHRRSLS 243 K + + R+ Q ++ YL L +++ A + ++Q R Sbjct: 415 KSTSSDPGSRQAGRRRGQQQETETFYLTKLQEYLSGRSILAKLQAKHEKLQEALQRGDKE 474 Query: 244 SLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMMLLSE 303 + + + + Q P ++ + R++G + +Q G+ + L +E+C+ + Sbjct: 475 EQEVSWTQYTQRKFQKSRQPRPSSQYNQRLFGGDMEKFIQSSGQPVPLVVESCIRFINLN 534 Query: 304 GMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCS--DPHAVAGALKSYLRELPEPLMT 361 G++ EG+FR++ + ++ L E C+ D +VAG LK Y R L PL Sbjct: 535 GLQHEGIFRVSGAQLRVSEIRDAFERGEDPLVEGCTAHDLDSVAGVLKLYFRSLEPPLFP 594 Query: 362 FDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTPS 421 DL+ + + ++ L+ R++ + + RLP L LRYL FL LA+ + N M P Sbjct: 595 PDLFGELLASSELEATAERVEHVSRLLWRLPAPVLVVLRYLFTFLNHLAQYSDENMMDPY 654 Query: 422 NIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGLF 481 N+A+ GP LL P + D L +Q + V + T PG + Sbjct: 655 NLAVCFGPTLLPVPAGQ-DPVALQGRVNQLVQTLIVQPDRVFPPLTSLPGPVYEKCMAPP 713 Query: 482 SAVTLQDTVSDRLASEELPSTAVPTPA 508 SA L D + L ++ P PA Sbjct: 714 SASCLGDAQLESLGADNEPELEAEMPA 740 >gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens] Length = 459 Score = 109 bits (273), Expect = 8e-24 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 269 HFPRVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMA 328 H +VY L T ++ + + ++ C+ + S G+ EGL+R++ + +++ +K Sbjct: 261 HVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFD 320 Query: 329 SDPHSLE---EFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQ 385 D + D + + GALK Y R+LP PL+T+D Y ++ +A + +P +L+ L Sbjct: 321 RDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLH 380 Query: 386 EVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLD 445 E LPP + LRYLM L R+ ++ N M N+ IV GP L+ PE LD Sbjct: 381 EALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPE-------LD 433 Query: 446 A-ASVSSIQVVG-VVEALIQSADTLF 469 A A+++ I+ VVE LI++ D LF Sbjct: 434 AMAALNDIRYQRLVVELLIKNEDILF 459 >gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens] Length = 433 Score = 109 bits (273), Expect = 8e-24 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 269 HFPRVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMA 328 H +VY L T ++ + + ++ C+ + S G+ EGL+R++ + +++ +K Sbjct: 235 HVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFD 294 Query: 329 SDPHSLE---EFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQ 385 D + D + + GALK Y R+LP PL+T+D Y ++ +A + +P +L+ L Sbjct: 295 RDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLH 354 Query: 386 EVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLD 445 E LPP + LRYLM L R+ ++ N M N+ IV GP L+ PE LD Sbjct: 355 EALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPE-------LD 407 Query: 446 A-ASVSSIQVVG-VVEALIQSADTLF 469 A A+++ I+ VVE LI++ D LF Sbjct: 408 AMAALNDIRYQRLVVELLIKNEDILF 433 >gi|229094128 active breakpoint cluster region-related protein isoform c [Homo sapiens] Length = 813 Score = 108 bits (270), Expect = 2e-23 Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 2/192 (1%) Query: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332 V+GV ++ + ++ + CV + G++E G++R++ A+ ++ LK ++ Sbjct: 598 VFGVKISVVTKRERSKVPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDANNK 657 Query: 333 SLEEFCSDP--HAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSR 390 + SD +A+AG LK Y RELPEPL+T LY +M +L +P A+ + + Sbjct: 658 DILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRS 717 Query: 391 LPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVS 450 LP NL +L++ L R+AE++ +NKM+ N+A V GP LL P E E AA + Sbjct: 718 LPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSAADIW 777 Query: 451 SIQVVGVVEALI 462 S V+ V+ L+ Sbjct: 778 SHDVMAQVQVLL 789 >gi|38679957 active breakpoint cluster region-related protein isoform a [Homo sapiens] Length = 859 Score = 108 bits (270), Expect = 2e-23 Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 2/192 (1%) Query: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332 V+GV ++ + ++ + CV + G++E G++R++ A+ ++ LK ++ Sbjct: 644 VFGVKISVVTKRERSKVPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDANNK 703 Query: 333 SLEEFCSDP--HAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSR 390 + SD +A+AG LK Y RELPEPL+T LY +M +L +P A+ + + Sbjct: 704 DILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRS 763 Query: 391 LPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVS 450 LP NL +L++ L R+AE++ +NKM+ N+A V GP LL P E E AA + Sbjct: 764 LPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSAADIW 823 Query: 451 SIQVVGVVEALI 462 S V+ V+ L+ Sbjct: 824 SHDVMAQVQVLL 835 >gi|38679954 active breakpoint cluster region-related protein isoform b [Homo sapiens] Length = 822 Score = 108 bits (270), Expect = 2e-23 Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 2/192 (1%) Query: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332 V+GV ++ + ++ + CV + G++E G++R++ A+ ++ LK ++ Sbjct: 607 VFGVKISVVTKRERSKVPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDANNK 666 Query: 333 SLEEFCSDP--HAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSR 390 + SD +A+AG LK Y RELPEPL+T LY +M +L +P A+ + + Sbjct: 667 DILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRS 726 Query: 391 LPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVS 450 LP NL +L++ L R+AE++ +NKM+ N+A V GP LL P E E AA + Sbjct: 727 LPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSAADIW 786 Query: 451 SIQVVGVVEALI 462 S V+ V+ L+ Sbjct: 787 SHDVMAQVQVLL 798 >gi|34013590 Rho GTPase activating protein 2 [Homo sapiens] Length = 698 Score = 106 bits (265), Expect = 6e-23 Identities = 126/463 (27%), Positives = 180/463 (38%), Gaps = 67/463 (14%) Query: 269 HFPRVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMA 328 H R YG LA L +E CV + G+ EEGLFR+ A++++ L+ + Sbjct: 162 HHERKYGPRLAPLL----------VEQCVDFIRERGLTEEGLFRMPGQANLVRDLQDSFD 211 Query: 329 SDPHSLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASL--KEPGARLQALQE 386 L + +D H VA LK YLRELPEP++ F Y+D++ A L K+ G L + Sbjct: 212 CGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGTLELAK 271 Query: 387 VCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDA 446 S LP N + LRY+ KFL + VNKM+ N+A V GPN+L P+ E ++ Sbjct: 272 QVSNLPQANYNLLRYICKFLDEVQAYSNVNKMSVQNLATVFGPNIL-RPQVEDPVTIMEG 330 Query: 447 ASVSSIQVVGVVEALIQSADTLFPGDINFNVS----GLFSAVTLQDTVSDRLASEELPST 502 S+ V ++ LI+ LF + + GL AV SEE+ Sbjct: 331 TSL----VQHLMTVLIRKHSQLFTAPVPEGPTSPRGGLQCAV--------GWGSEEVTRD 378 Query: 503 AVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASP-KVTRSPPETAAPVEDM 561 + P PA + A+ A RT P SP K ++ P + Sbjct: 379 SQGEPGGPGLPAHRTSSLDG---AAVAVLSRTAPTGPGSRCSPGKKVQTLPSWKSSFRQP 435 Query: 562 ARRTKRPAPARPTMPPPQVS--------------GSRSSPPAPPLPPGSGS--------- 598 + P ++ P +S G R + L SGS Sbjct: 436 RSLSGSPKGGGSSLEVPIISSGGNWLMNGLSSLRGHRRASSGDRL-KDSGSVQRLSTYDN 494 Query: 599 -------PGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPAS 651 PG P G+S +V L A S RS A S Sbjct: 495 VPAPGLVPGIPSVASMAWSGASSSESSVGGSLSSCTACRASDSSARSSLHTDWAL--EPS 552 Query: 652 PSPVSLSNPAQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPR 694 P P S +P +DL + E GA A + P+ P P + R Sbjct: 553 PLPSSSEDPKSLDLDHSMDEAGA-GASNSEPSEPDSPTREHAR 594 >gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo sapiens] Length = 653 Score = 106 bits (264), Expect = 8e-23 Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 7/182 (3%) Query: 293 IEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYL 352 +E CV + G+KEEGLFRL A+++K L+ + +D H VA LK YL Sbjct: 61 VEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYL 120 Query: 353 RELPEPLMTFDLYDDWMRAASL--KEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLA 410 RELPEP++ + Y+D++ A L KE A ++ L + LP N + L+Y+ +FL + Sbjct: 121 RELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQ 180 Query: 411 EEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFP 470 VNKM+ N+A V GPN+L P K D + +V Q++ V +I D LFP Sbjct: 181 SYSGVNKMSVQNLATVFGPNILRP--KVEDPLTIMEGTVVVQQLMSV---MISKHDCLFP 235 Query: 471 GD 472 D Sbjct: 236 KD 237 >gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sapiens] Length = 655 Score = 106 bits (264), Expect = 8e-23 Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 7/182 (3%) Query: 293 IEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYL 352 +E CV + G+KEEGLFRL A+++K L+ + +D H VA LK YL Sbjct: 63 VEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYL 122 Query: 353 RELPEPLMTFDLYDDWMRAASL--KEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLA 410 RELPEP++ + Y+D++ A L KE A ++ L + LP N + L+Y+ +FL + Sbjct: 123 RELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQ 182 Query: 411 EEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFP 470 VNKM+ N+A V GPN+L P K D + +V Q++ V +I D LFP Sbjct: 183 SYSGVNKMSVQNLATVFGPNILRP--KVEDPLTIMEGTVVVQQLMSV---MISKHDCLFP 237 Query: 471 GD 472 D Sbjct: 238 KD 239 >gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sapiens] Length = 748 Score = 106 bits (264), Expect = 8e-23 Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 7/182 (3%) Query: 293 IEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYL 352 +E CV + G+KEEGLFRL A+++K L+ + +D H VA LK YL Sbjct: 156 VEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYL 215 Query: 353 RELPEPLMTFDLYDDWMRAASL--KEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLA 410 RELPEP++ + Y+D++ A L KE A ++ L + LP N + L+Y+ +FL + Sbjct: 216 RELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQ 275 Query: 411 EEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFP 470 VNKM+ N+A V GPN+L P K D + +V Q++ V +I D LFP Sbjct: 276 SYSGVNKMSVQNLATVFGPNILRP--KVEDPLTIMEGTVVVQQLMSV---MISKHDCLFP 330 Query: 471 GD 472 D Sbjct: 331 KD 332 >gi|21314774 T-cell activation Rho GTPase-activating protein isoform b [Homo sapiens] Length = 731 Score = 105 bits (263), Expect = 1e-22 Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 33/376 (8%) Query: 292 PIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMAS-DPHSLEEFCSDPHAVAGALKS 350 PI+ + +L +G EG+FR AA K LK+ + S D LE H +A K Sbjct: 103 PIQDILTILCLKGPSTEGIFRRAANEKARKELKEELNSGDAVDLERL--PVHLLAVVFKD 160 Query: 351 YLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLA 410 +LR +P L++ DL+++WM A +++ R++AL++V +LP NL L++L+ L ++ Sbjct: 161 FLRSIPRKLLSSDLFEEWMGALEMQDEEDRIEALKQVADKLPRPNLLLLKHLVYVLHLIS 220 Query: 411 EEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQA-QLDAASVSSIQVVGVVEALIQSADTLF 469 + EVN+M SN+AI +GPN+L E DQ+ +A + +V +VE LI + +F Sbjct: 221 KNSEVNRMDSSNLAICIGPNML---TLENDQSLSFEAQKDLNNKVKTLVEFLIDNCFEIF 277 Query: 470 PGDINFNVSGLFSAVTLQDTVSDRLAS----EELPSTAVPTPATTPAPAPAPAPAPAPAL 525 +I + S + S +L+ T S +++ S + + + +P+ P + Sbjct: 278 GENIPVH-SSITSDDSLEHTDSSDVSTLQNDSAYDSNDPDVESNSSSGISSPSRQPQVPM 336 Query: 526 ASAATKE----RTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVS 581 A+AA + + EV P P V R A P RR + P+MP Q Sbjct: 337 ATAAGLDSAGPQDAREVSPEPIVSTVARLKSSLAQP----DRRY-----SEPSMPSSQ-E 386 Query: 582 GSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPAS 641 S L G P+ VGS L + P P PA + + P Sbjct: 387 CLESRVTNQTLTKSEGDFPVPR------VGSRLESEEAEDPF-PEEVFPAVQGKTKRPVD 439 Query: 642 PSPASPGPASPSPVSL 657 + P S P +L Sbjct: 440 LKIKNLAPGSVLPRAL 455 >gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] Length = 1444 Score = 105 bits (262), Expect = 1e-22 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 24/273 (8%) Query: 274 YGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH- 332 +G L +L+ G+++ +++C + + G+ + G++RL+ S ++RL+Q SD Sbjct: 19 FGCDLTEYLESSGQDVPYVLKSCAEFIETHGIVD-GIYRLSGVTSNIQRLRQEFGSDQCP 77 Query: 333 --SLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSR 390 + E + D H V K Y RELP PL+T++LY+ + A S +L +Q V Sbjct: 78 DLTREVYLQDIHCVGSLCKLYFRELPNPLLTYELYEKFTEAVSHCPEEGQLARIQNVIQE 137 Query: 391 LPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVS 450 LPP + L YL++ LA +A M N+A+V PNLL E E DAA ++ Sbjct: 138 LPPSHYRTLEYLIRHLAHIASFSSKTNMHARNLALVWAPNLLRSKEIEATGCNGDAAFLA 197 Query: 451 SIQVVGVVEALIQSADTLF----PGDINFNVSGLFSAVTLQDTVSDRLASEELPSTAVPT 506 V+E ++ D +F PG + D + S LP+ ++P Sbjct: 198 VRVQQVVIEFILNHVDQIFNNGAPGSLE------------NDENRPIMKSLTLPALSLPM 245 Query: 507 PATTPAPAPAPAPAPAPALASAATKERTESEVP 539 + A A + A A KER E+ +P Sbjct: 246 KLV----SLEEAQARSLATNHPARKERRENSLP 274 Score = 38.9 bits (89), Expect = 0.016 Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 24/144 (16%) Query: 558 VEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAP 617 +E + P PA T P + S P P PPGS L S AP Sbjct: 663 IESEEELSSLPPPALKTSPIQPILESSLGPFIPSEPPGS------------LPCGSFPAP 710 Query: 618 TVPPPLPPTPPQPARRQSRRSPASPSPASPGP--------ASPSPVSLSNPAQVDLGAAT 669 V PL PA + ++ + + S P P AS +P+ + P + AT Sbjct: 711 -VSTPLEVWTRDPANQSTQGASTAASREKPEPEQGLHPDLASLAPLEIV-PFEKASPQAT 768 Query: 670 AEGGAPEAISGVPTPPAIPPQPRP 693 E G P +S P PPA PP P P Sbjct: 769 VEVGGPGNLS-PPLPPA-PPPPTP 790 Score = 31.2 bits (69), Expect = 3.4 Identities = 31/121 (25%), Positives = 42/121 (34%), Gaps = 16/121 (13%) Query: 521 PAPALASAATKERTESEVPP-----RPASPKVTRSPPETAAPVEDMARRTKRPAPARPTM 575 P PAL ++ + ES + P P S P + P+E R PA + Sbjct: 673 PPPALKTSPIQPILESSLGPFIPSEPPGSLPCGSFPAPVSTPLEVWTRD-----PANQST 727 Query: 576 PPPQVSGSRSSP-PAPPLPPGSGSPGTPQALPRRLVGSSLRAPT-----VPPPLPPTPPQ 629 + SR P P L P S + +P + PPLPP PP Sbjct: 728 QGASTAASREKPEPEQGLHPDLASLAPLEIVPFEKASPQATVEVGGPGNLSPPLPPAPPP 787 Query: 630 P 630 P Sbjct: 788 P 788 >gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens] Length = 2087 Score = 103 bits (258), Expect = 4e-22 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 6/207 (2%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASD- 330 RV+G L HL G E+ +++C + G+ + G++RL+ AS ++RL+ S+ Sbjct: 368 RVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIVD-GIYRLSGVASNIQRLRHEFDSEH 426 Query: 331 --PHSLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVC 388 + E + D H+V K Y RELP PL+T+ LY+ + A S RL + +V Sbjct: 427 VPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVI 486 Query: 389 SRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAAS 448 +LPP + L +LM+ L+ LA+ + M N+AIV PNLL + E AA Sbjct: 487 QQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAF 546 Query: 449 VS-SIQVVGVVEALIQSADTLFPGDIN 474 + IQ V VVE ++ D LF G I+ Sbjct: 547 MEVRIQSV-VVEFILNHVDVLFSGRIS 572 Score = 36.6 bits (83), Expect = 0.081 Identities = 49/207 (23%), Positives = 76/207 (36%), Gaps = 31/207 (14%) Query: 505 PTPATTPA-----PAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPP--ETAAP 557 PTP P+ P+ +P + A + T +++ + AS V P + AA Sbjct: 1235 PTPPNLPSDKIYPPSGSPEENTSTATMTYMTTTPATAQMSTKEASWDVAEQPTTADFAAA 1294 Query: 558 VEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAP 617 RT RP +PPP S PP G QA + +S + Sbjct: 1295 TLQRTHRTNRP------LPPPPSQRSAEQPPV---------VGQVQAATNIGLNNSHKVQ 1339 Query: 618 TVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATAEGGAPEA 677 V P+P PP+P ++ PAS + G A+ + ++ Q L +G Sbjct: 1340 GV-VPVPERPPEP---RAMDDPASAFISDSG-AAAAQCPMATAVQPGLPEKVRDGARVPL 1394 Query: 678 I----SGVPTPPAIPPQPRPRSLASET 700 + VP P P P P + E+ Sbjct: 1395 LHLRAESVPAHPCGFPAPLPPTRMMES 1421 Score = 35.0 bits (79), Expect = 0.24 Identities = 45/173 (26%), Positives = 61/173 (35%), Gaps = 25/173 (14%) Query: 486 LQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASP 545 + + +D +S S + + P P P P P AS T V A P Sbjct: 1427 IHSSSADATSSSNYHSFVTASSTSVDDALPLPLPVPQPKHASQKT-------VYSSFARP 1479 Query: 546 KVTRSP--PETAAPVEDMARRTKRPAPARP---TMPPPQVSGSRSSPPAPP-------LP 593 VT P P+ RP P + QV G+RS PPA + Sbjct: 1480 DVTTEPFGPDNCLHFNMTPNCQYRPQSVPPHHNKLEQHQVYGARSEPPASMGLRYNTYVA 1539 Query: 594 PGSGSPGTPQALPRRL-----VGSSLRAPTVPPPLPPTPPQPARRQSRRSPAS 641 PG + G R+ + SS+R P +PP P R QS +P S Sbjct: 1540 PGRNASGHHSKPCSRVEYVSSLSSSVRNTCYPEDIPPY-PTIRRVQSLHAPPS 1591 >gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens] Length = 1738 Score = 103 bits (258), Expect = 4e-22 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 6/207 (2%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASD- 330 RV+G L HL G E+ +++C + G+ + G++RL+ AS ++RL+ S+ Sbjct: 19 RVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIVD-GIYRLSGVASNIQRLRHEFDSEH 77 Query: 331 --PHSLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVC 388 + E + D H+V K Y RELP PL+T+ LY+ + A S RL + +V Sbjct: 78 VPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVI 137 Query: 389 SRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAAS 448 +LPP + L +LM+ L+ LA+ + M N+AIV PNLL + E AA Sbjct: 138 QQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAF 197 Query: 449 VS-SIQVVGVVEALIQSADTLFPGDIN 474 + IQ V VVE ++ D LF G I+ Sbjct: 198 MEVRIQSV-VVEFILNHVDVLFSGRIS 223 Score = 36.6 bits (83), Expect = 0.081 Identities = 49/207 (23%), Positives = 76/207 (36%), Gaps = 31/207 (14%) Query: 505 PTPATTPA-----PAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPP--ETAAP 557 PTP P+ P+ +P + A + T +++ + AS V P + AA Sbjct: 886 PTPPNLPSDKIYPPSGSPEENTSTATMTYMTTTPATAQMSTKEASWDVAEQPTTADFAAA 945 Query: 558 VEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAP 617 RT RP +PPP S PP G QA + +S + Sbjct: 946 TLQRTHRTNRP------LPPPPSQRSAEQPPV---------VGQVQAATNIGLNNSHKVQ 990 Query: 618 TVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATAEGGAPEA 677 V P+P PP+P ++ PAS + G A+ + ++ Q L +G Sbjct: 991 GV-VPVPERPPEP---RAMDDPASAFISDSG-AAAAQCPMATAVQPGLPEKVRDGARVPL 1045 Query: 678 I----SGVPTPPAIPPQPRPRSLASET 700 + VP P P P P + E+ Sbjct: 1046 LHLRAESVPAHPCGFPAPLPPTRMMES 1072 Score = 35.0 bits (79), Expect = 0.24 Identities = 45/173 (26%), Positives = 61/173 (35%), Gaps = 25/173 (14%) Query: 486 LQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASP 545 + + +D +S S + + P P P P P AS T V A P Sbjct: 1078 IHSSSADATSSSNYHSFVTASSTSVDDALPLPLPVPQPKHASQKT-------VYSSFARP 1130 Query: 546 KVTRSP--PETAAPVEDMARRTKRPAPARP---TMPPPQVSGSRSSPPAPP-------LP 593 VT P P+ RP P + QV G+RS PPA + Sbjct: 1131 DVTTEPFGPDNCLHFNMTPNCQYRPQSVPPHHNKLEQHQVYGARSEPPASMGLRYNTYVA 1190 Query: 594 PGSGSPGTPQALPRRL-----VGSSLRAPTVPPPLPPTPPQPARRQSRRSPAS 641 PG + G R+ + SS+R P +PP P R QS +P S Sbjct: 1191 PGRNASGHHSKPCSRVEYVSSLSSSVRNTCYPEDIPPY-PTIRRVQSLHAPPS 1242 >gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens] Length = 1227 Score = 102 bits (255), Expect = 9e-22 Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 7/197 (3%) Query: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332 V+GV +A + ++ + CV + GM+E G++R++ A+ ++ LK + Sbjct: 1007 VFGVKIAVVTKRERSKVPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNK 1066 Query: 333 SLEEFCS--DPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSR 390 + S D +A+AG LK Y RELPEPL T + Y ++ +L +P A+ + + Sbjct: 1067 DVSVMMSEMDVNAIAGTLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLS 1126 Query: 391 LPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVS 450 LP NL +L+ L R+AE++ VNKM+ N+A V GP LL P EKE + ++ Sbjct: 1127 LPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPIT 1186 Query: 451 -----SIQVVGVVEALI 462 S++V+ V+ L+ Sbjct: 1187 MTDSWSLEVMSQVQVLL 1203 Score = 30.8 bits (68), Expect = 4.5 Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 17/99 (17%) Query: 508 ATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKR 567 A+ P PAPA P PA A R + E P A P R P A+ D Sbjct: 94 ASRPQPAPADGADPPPAEEPEA---RPDGEGSPGKARPGTARRPGAAASGERD------- 143 Query: 568 PAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALP 606 PP V+ RS+ + G G PG P Sbjct: 144 -----DRGPPASVAALRSN--FERIRKGHGQPGADAEKP 175 >gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens] Length = 1271 Score = 102 bits (255), Expect = 9e-22 Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 7/197 (3%) Query: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332 V+GV +A + ++ + CV + GM+E G++R++ A+ ++ LK + Sbjct: 1051 VFGVKIAVVTKRERSKVPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNK 1110 Query: 333 SLEEFCS--DPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSR 390 + S D +A+AG LK Y RELPEPL T + Y ++ +L +P A+ + + Sbjct: 1111 DVSVMMSEMDVNAIAGTLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLLS 1170 Query: 391 LPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASVS 450 LP NL +L+ L R+AE++ VNKM+ N+A V GP LL P EKE + ++ Sbjct: 1171 LPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPIT 1230 Query: 451 -----SIQVVGVVEALI 462 S++V+ V+ L+ Sbjct: 1231 MTDSWSLEVMSQVQVLL 1247 Score = 30.8 bits (68), Expect = 4.5 Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 17/99 (17%) Query: 508 ATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKR 567 A+ P PAPA P PA A R + E P A P R P A+ D Sbjct: 94 ASRPQPAPADGADPPPAEEPEA---RPDGEGSPGKARPGTARRPGAAASGERD------- 143 Query: 568 PAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALP 606 PP V+ RS+ + G G PG P Sbjct: 144 -----DRGPPASVAALRSN--FERIRKGHGQPGADAEKP 175 >gi|4757980 beta chimerin isoform 2 [Homo sapiens] Length = 468 Score = 102 bits (253), Expect = 2e-21 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDP 331 +VY L T ++ + + ++ C+ + + G+K EGL+R++ ++ +K D Sbjct: 273 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG 332 Query: 332 HSLEEFCS---DPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVC 388 + + D + + GALK Y R+LP P++T+D Y ++ AA + RL+A+ EV Sbjct: 333 EKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVL 392 Query: 389 SRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAAS 448 LPP + LRYLM L ++ ++ N M N+ IV GP L+ PPE + L Sbjct: 393 MLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPE----DSTLTTLH 448 Query: 449 VSSIQVVGVVEALIQSADTLF 469 Q + +V+ LI++ D LF Sbjct: 449 DMRYQKL-IVQILIENEDVLF 468 >gi|91106928 beta chimerin isoform 1 [Homo sapiens] Length = 332 Score = 102 bits (253), Expect = 2e-21 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDP 331 +VY L T ++ + + ++ C+ + + G+K EGL+R++ ++ +K D Sbjct: 137 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG 196 Query: 332 HSLEEFCS---DPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVC 388 + + D + + GALK Y R+LP P++T+D Y ++ AA + RL+A+ EV Sbjct: 197 EKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVL 256 Query: 389 SRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAAS 448 LPP + LRYLM L ++ ++ N M N+ IV GP L+ PPE + L Sbjct: 257 MLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPE----DSTLTTLH 312 Query: 449 VSSIQVVGVVEALIQSADTLF 469 Q + +V+ LI++ D LF Sbjct: 313 DMRYQKL-IVQILIENEDVLF 332 >gi|4757766 Rho GTPase activating protein 1 [Homo sapiens] Length = 439 Score = 101 bits (252), Expect = 2e-21 Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 7/164 (4%) Query: 274 YGVSLATHLQELGRE---IALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASD 330 +GVSL HLQE E I + + V L + + EG+FR +A V++ ++Q Sbjct: 242 FGVSLQ-HLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMG 300 Query: 331 -PHSLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCS 389 P +++ ++ H A LK++LRELPEPL+TFDLY + ++ E R+ A +V Sbjct: 301 LPVDFDQY-NELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDE-SQRVPATLQVLQ 358 Query: 390 RLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLW 433 LP EN LR+L FL +++ + NKMT +N+A+V GPNLLW Sbjct: 359 TLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLW 402 >gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sapiens] Length = 890 Score = 101 bits (252), Expect = 2e-21 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 4/203 (1%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDP 331 RV+G L HLQ G+E+ +++C + G+ + G++RL+ +S +++L+Q S+ Sbjct: 16 RVFGCDLQEHLQHSGQEVPQVLKSCAEFVEEYGVVD-GIYRLSGVSSNIQKLRQEFESER 74 Query: 332 HS---LEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVC 388 + + D H V+ K+Y RELP+PL+T+ LYD + A ++ RL + EV Sbjct: 75 KPDLRRDVYLQDIHCVSSLCKAYFRELPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVL 134 Query: 389 SRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAAS 448 LP N L +LM+ L +A M N+AIV PNLL + E AA Sbjct: 135 RELPVPNYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNLLRSKDIEASGFNGTAAF 194 Query: 449 VSSIQVVGVVEALIQSADTLFPG 471 + VVE ++ D LF G Sbjct: 195 MEVRVQSIVVEFILTHVDQLFGG 217 Score = 35.0 bits (79), Expect = 0.24 Identities = 37/153 (24%), Positives = 53/153 (34%), Gaps = 14/153 (9%) Query: 507 PATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAP--------- 557 PA P+PA P P P L E+ E+ PAS + S P+ AP Sbjct: 450 PALQHRPSPASGPGPGPGLGPGPPDEKLEAS----PASSPLADSGPDDLAPALEDSLSQE 505 Query: 558 VEDMARRTKRPAPARPT-MPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRA 616 V+D + + + P + +++ PG PG VG + Sbjct: 506 VQDSFSFLEDSSSSEPEWVGAEDGEVAQAEAAGAAFSPGEDDPGMGYLEELLGVGPQVEE 565 Query: 617 PTVPPPLPPTPPQPARRQSRRSPASPSPASPGP 649 +V PPL A+ S S A P P Sbjct: 566 FSVEPPLDDLSLDEAQFVLAPSCCSLDSAGPRP 598 >gi|71040098 Rho GTPase activating protein 30 isoform 1 [Homo sapiens] Length = 1101 Score = 101 bits (252), Expect = 2e-21 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 4/203 (1%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDP 331 RV+G L HLQ G+E+ +++C + G+ + G++RL+ +S +++L+Q S+ Sbjct: 16 RVFGCDLQEHLQHSGQEVPQVLKSCAEFVEEYGVVD-GIYRLSGVSSNIQKLRQEFESER 74 Query: 332 HS---LEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVC 388 + + D H V+ K+Y RELP+PL+T+ LYD + A ++ RL + EV Sbjct: 75 KPDLRRDVYLQDIHCVSSLCKAYFRELPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVL 134 Query: 389 SRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAAS 448 LP N L +LM+ L +A M N+AIV PNLL + E AA Sbjct: 135 RELPVPNYRTLEFLMRHLVHMASFSAQTNMHARNLAIVWAPNLLRSKDIEASGFNGTAAF 194 Query: 449 VSSIQVVGVVEALIQSADTLFPG 471 + VVE ++ D LF G Sbjct: 195 MEVRVQSIVVEFILTHVDQLFGG 217 Score = 35.0 bits (79), Expect = 0.24 Identities = 37/153 (24%), Positives = 53/153 (34%), Gaps = 14/153 (9%) Query: 507 PATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAP--------- 557 PA P+PA P P P L E+ E+ PAS + S P+ AP Sbjct: 450 PALQHRPSPASGPGPGPGLGPGPPDEKLEAS----PASSPLADSGPDDLAPALEDSLSQE 505 Query: 558 VEDMARRTKRPAPARPT-MPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRA 616 V+D + + + P + +++ PG PG VG + Sbjct: 506 VQDSFSFLEDSSSSEPEWVGAEDGEVAQAEAAGAAFSPGEDDPGMGYLEELLGVGPQVEE 565 Query: 617 PTVPPPLPPTPPQPARRQSRRSPASPSPASPGP 649 +V PPL A+ S S A P P Sbjct: 566 FSVEPPLDDLSLDEAQFVLAPSCCSLDSAGPRP 598 >gi|26986534 Rho GTPase activating protein 12 [Homo sapiens] Length = 846 Score = 99.8 bits (247), Expect = 8e-21 Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 9/200 (4%) Query: 272 RVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDP 331 +V+G +LA Q + ++ C+ + G+ +G++R++ +V+++L+ + D Sbjct: 652 QVFGSNLANLCQRENGTVPKFVKLCIEHVEEHGLDIDGIYRVSGNLAVIQKLRFAVNHDE 711 Query: 332 HS--LEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCS 389 + D H + GALK + RELPEPL TF+ ++D++ A +EP R+ A++++ Sbjct: 712 KLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIK-QEPRQRVAAVKDLIR 770 Query: 390 RLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLWPPEKEGDQAQLDAASV 449 +LP N ++ L + L R+ E E N+MT +IAIV GP LL P ++ G+ A V Sbjct: 771 QLPKPNQDTMQILFRHLRRVIENGEKNRMTYQSIAIVFGPTLLKPEKETGNIA------V 824 Query: 450 SSIQVVGVVEALIQSADTLF 469 ++ +VE ++ ++F Sbjct: 825 HTVYQNQIVELILLELSSIF 844 >gi|194272142 myosin IXB isoform 2 [Homo sapiens] Length = 2022 Score = 98.6 bits (244), Expect = 2e-20 Identities = 53/148 (35%), Positives = 87/148 (58%) Query: 289 IALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGAL 348 + + +E + + G+ EGL+R + A+ + L+Q + +DP +++ HA+ G L Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771 Query: 349 KSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLAR 408 K +LRELPEPLMTF Y D++RA L E +L A+ V LP N ++L L+ L + Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831 Query: 409 LAEEQEVNKMTPSNIAIVLGPNLLWPPE 436 +A ++VN+M+P +AI+ P LL P+ Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCLLRCPD 1859 >gi|33356170 myosin IXB isoform 1 [Homo sapiens] Length = 2157 Score = 98.6 bits (244), Expect = 2e-20 Identities = 53/148 (35%), Positives = 87/148 (58%) Query: 289 IALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGAL 348 + + +E + + G+ EGL+R + A+ + L+Q + +DP +++ HA+ G L Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771 Query: 349 KSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLAR 408 K +LRELPEPLMTF Y D++RA L E +L A+ V LP N ++L L+ L + Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831 Query: 409 LAEEQEVNKMTPSNIAIVLGPNLLWPPE 436 +A ++VN+M+P +AI+ P LL P+ Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCLLRCPD 1859 Score = 38.9 bits (89), Expect = 0.016 Identities = 41/150 (27%), Positives = 53/150 (35%), Gaps = 34/150 (22%) Query: 482 SAVTLQDTVSDRLASEELPSTAVPTP-ATTPAPAPAPAPAPAPALASAAT-KERTESEVP 539 S +L + + R ASE P+ A+P P A TP+P P A P +S T + +T P Sbjct: 2004 STESLLEERAGRGASEGPPAPALPCPGAPTPSPLPTVAAPPRRRPSSFVTVRVKTPRRTP 2063 Query: 540 PRPAS------------PKVTRSPPETAAPVEDMARRTKRP------------------- 568 P + P+ E AAPV +RP Sbjct: 2064 IMPTANIKLPPGLPSHLPRWAPGAREAAAPVRRREPPARRPDQIHSVYITPGADLPVQGA 2123 Query: 569 -APARPTMPPPQVSGSRSSPPAPPLPPGSG 597 P PP S PP LPP SG Sbjct: 2124 LEPLEEDGQPPGAKRRYSDPPTYCLPPASG 2153 >gi|50843948 Rho GTPase activating protein 10 [Homo sapiens] Length = 786 Score = 98.2 bits (243), Expect = 2e-20 Identities = 101/392 (25%), Positives = 166/392 (42%), Gaps = 69/392 (17%) Query: 257 GQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAG 316 G+ S S PR G + L ++G I I C+ + + G+ ++GL+R+ Sbjct: 369 GKEALSHSFNTAIIPRPEGNA---QLDKMGFTI---IRKCISAVETRGINDQGLYRVVGV 422 Query: 317 ASVLKRLKQTMASDPHSLEEFCSDPHA------VAGALKSYLRELPEPLMTFDLYDDWMR 370 +S ++RL +M D + E + A + ALK YLR LPEPLMT++L+ D++ Sbjct: 423 SSKVQRLL-SMLMDVKTCNEVDLENSADWEVKTITSALKQYLRSLPEPLMTYELHGDFIV 481 Query: 371 AASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPN 430 A P +R+ A+ + +LP +N L L+K L ++ + N MT +N+ +V GP Sbjct: 482 PAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHLTNVSNHSKQNLMTVANLGVVFGPT 541 Query: 431 LLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLF--PGDINFNVSGLFSA----- 483 L+ P E+ A L +I VVE LI++ + +F P D F SA Sbjct: 542 LMRPQEE--TVAALMDLKFQNI----VVEILIENHEKIFRTPPDTTFPEPTCLSASPPNA 595 Query: 484 ----------------------VTLQDTVSDRLASEELPSTAV-----PTPATTPAPAPA 516 + L+D + + E+ P++++ P+P TT P P Sbjct: 596 PPRQSKRQGQRTKRPVAVYNLCLELEDGDNPYPSKEDTPTSSLDSLSSPSPVTTAVPGP- 654 Query: 517 PAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMP 576 P P LA + S +P + S V P++ T + P P Sbjct: 655 PGPDKNHLLADGGSFGDWASTIPGQTRSSMVQWLNPQSPT-------TTSSNSAVTPLSP 707 Query: 577 PPQVSGSRSSPPAPPLPPGSGSPGTPQALPRR 608 S P P PP + + P+++ R Sbjct: 708 --------GSSPFPFSPPATVADKPPESIRSR 731 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.128 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,266,618 Number of Sequences: 37866 Number of extensions: 2241507 Number of successful extensions: 65224 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1133 Number of HSP's successfully gapped in prelim test: 2683 Number of HSP's that attempted gapping in prelim test: 17495 Number of HSP's gapped (non-prelim): 21588 length of query: 701 length of database: 18,247,518 effective HSP length: 109 effective length of query: 592 effective length of database: 14,120,124 effective search space: 8359113408 effective search space used: 8359113408 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.