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Name: KCNQ5 Sequence: fasta or formatted (932aa) NCBI GI: 28373065
Description:

potassium voltage-gated channel, KQT-like subfamily, member 5 isoform 1

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [923aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
alt prot [942aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
alt prot [951aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
alt prot [822aa] potassium voltage-gated channel, KQT-like subfamily, member 5 iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         79           6
 C cysteine            1.9         18           3
 D aspartate           4.4         41           2
 E glutamate           4.8         45           2
 F phenylalanine       3.9         36           2
 G glycine             7.5         70           6
 H histidine           1.7         16           2
 I isoleucine          5.3         49           2
 K lysine              6.1         57           2
 L leucine            10.1         94           4
 M methionine          1.5         14           1
 N asparagine          2.1         20           1
 P proline             4.6         43           3
 Q glutamine           4.7         44           2
 R arginine            6.9         64           2
 S serine             10.6         99           3
 T threonine           6.1         57           2
 V valine              5.8         54           2
 W tryptophan          1.4         13           2
 Y tyrosine            2.0         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, KQT-like subfamily,... 
KCNQ5                 0.993   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.986   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.986   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.447   potassium voltage-gated channel, KQT-like subfamily...
KCNQ4                 0.404   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ4                 0.398   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ2                 0.362   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.360   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.355   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.354   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ3                 0.315   potassium voltage-gated channel KQT-like protein 3 [H...
KCNQ2                 0.246   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ1                 0.213   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ1                 0.198   potassium voltage-gated channel, KQT-like subfamily,...
KCNB2                 0.036   potassium voltage-gated channel, Shab-related subfam...
KCNA3                 0.036   potassium voltage-gated channel, shaker-related subf...
KCNB1                 0.034   potassium voltage-gated channel, Shab-related subfami...
KCNA4                 0.034   potassium voltage-gated channel, shaker-related subfa...
KCNC4                 0.034   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.034   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.034   Shaw-related voltage-gated potassium channel protein...
KCNA1                 0.034   potassium voltage-gated channel subfamily A member ...
KCNC2                 0.032   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.032   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.032   Shaw-related voltage-gated potassium channel protein...
KCNC3                 0.031   Shaw-related voltage-gated potassium channel protein...
KCNA2                 0.031   potassium voltage-gated channel, shaker-related subfa...
KCND2                 0.030   potassium voltage-gated channel, Shal-related subfami...
KCNV1                 0.030   potassium channel, subfamily V, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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