Guide to the Human Genome
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Name: BRUNOL6 Sequence: fasta or formatted (481aa) NCBI GI: 70780381
Description:

bruno-like 6, RNA binding protein

Referenced in:

RNA-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.7         66           4
 C cysteine            1.5          7           1
 D aspartate           3.7         18           1
 E glutamate           3.5         17           2
 F phenylalanine       4.8         23           1
 G glycine            11.2         54           2
 H histidine           2.5         12           2
 I isoleucine          2.5         12           1
 K lysine              4.0         19           1
 L leucine             9.4         45           2
 M methionine          2.5         12           1
 N asparagine          2.5         12           2
 P proline             9.4         45           2
 Q glutamine           7.3         35           3
 R arginine            4.6         22           2
 S serine              5.6         27           3
 T threonine           4.2         20           2
 V valine              5.0         24           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bruno-like 6, RNA binding protein 
BRUNOL4               0.638   bruno-like 4, RNA binding protein isoform 1 
TNRC4                 0.635   trinucleotide repeat containing 4 
BRUNOL4               0.633   bruno-like 4, RNA binding protein isoform 2 
BRUNOL4               0.628   bruno-like 4, RNA binding protein isoform 3 
BRUNOL5               0.597   bruno-like 5, RNA binding protein isoform 1 
BRUNOL4               0.576   bruno-like 4, RNA binding protein isoform 4 
CUGBP2                0.372   CUG triplet repeat, RNA binding protein 2 isoform 3 ...
CUGBP2                0.371   CUG triplet repeat, RNA binding protein 2 isoform 4...
CUGBP2                0.369   CUG triplet repeat, RNA binding protein 2 isoform 1 ...
CUGBP2                0.369   CUG triplet repeat, RNA binding protein 2 isoform 2...
CUGBP1                0.359   CUG triplet repeat, RNA-binding protein 1 isoform 2 ...
CUGBP1                0.359   CUG triplet repeat, RNA-binding protein 1 isoform 1 [...
CUGBP1                0.357   CUG triplet repeat, RNA-binding protein 1 isoform 3 ...
BRUNOL5               0.280   bruno-like 5, RNA binding protein isoform 2 
ELAVL4                0.061   ELAV-like 4 isoform 1 
ELAVL3                0.060   ELAV-like protein 3 isoform 1 
ELAVL3                0.060   ELAV-like protein 3 isoform 2 
ELAVL4                0.058   ELAV-like 4 isoform 5 
ELAVL4                0.058   ELAV-like 4 isoform 4 
ELAVL4                0.058   ELAV-like 4 isoform 3 
ELAVL4                0.058   ELAV-like 4 isoform 2 
SF3B4                 0.058   splicing factor 3b, subunit 4 
ELAVL2                0.056   ELAV (embryonic lethal, abnormal vision, Drosophila...
HNRNPR                0.052   heterogeneous nuclear ribonucleoprotein R isoform 3...
HNRNPR                0.052   heterogeneous nuclear ribonucleoprotein R isoform 1...
HNRNPR                0.052   heterogeneous nuclear ribonucleoprotein R isoform 4...
HNRNPR                0.052   heterogeneous nuclear ribonucleoprotein R isoform 2 [...
RBM45                 0.052   RNA binding motif protein 45 
SYNCRIP               0.052   synaptotagmin binding, cytoplasmic RNA interacting ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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