Guide to the Human Genome
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Search of human proteins with 7706577

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7706577 PSMC3 interacting protein isoform 2 [Homo sapiens]
         (217 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7706577 PSMC3 interacting protein isoform 2 [Homo sapiens]         430   e-121
gi|32261320 PSMC3 interacting protein isoform 1 [Homo sapiens]        400   e-112
gi|55770834 centromere protein F [Homo sapiens]                        43   2e-04
gi|94721321 coiled-coil domain containing 11 [Homo sapiens]            40   0.002
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l...    39   0.003
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l...    39   0.003
gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-l...    39   0.003
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l...    39   0.003
gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein...    39   0.003
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein...    39   0.003
gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo sap...    39   0.003
gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo sap...    39   0.003
gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo sap...    39   0.003
gi|169208016 PREDICTED: similar to golgi autoantigen, golgin sub...    39   0.004
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub...    39   0.004
gi|95089461 discs large homolog 5 [Homo sapiens]                       39   0.004
gi|4504063 golgin 97 [Homo sapiens]                                    37   0.010
gi|21687119 spermatogenesis associated 18 homolog [Homo sapiens]       37   0.013
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  37   0.013
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l...    36   0.022
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l...    36   0.022
gi|71061468 centromere protein E [Homo sapiens]                        36   0.029
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l...    35   0.038
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l...    35   0.038
gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-l...    35   0.038
gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-l...    35   0.038
gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-l...    35   0.038
gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-l...    35   0.038
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom...    35   0.038
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom...    35   0.038

>gi|7706577 PSMC3 interacting protein isoform 2 [Homo sapiens]
          Length = 217

 Score =  430 bits (1106), Expect = e-121
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60
           MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI
Sbjct: 1   MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60

Query: 61  KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSA 120
           KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSA
Sbjct: 61  KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSA 120

Query: 121 LTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA 180
           LTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA
Sbjct: 121 LTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA 180

Query: 181 TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP 217
           TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP
Sbjct: 181 TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP 217


>gi|32261320 PSMC3 interacting protein isoform 1 [Homo sapiens]
          Length = 205

 Score =  400 bits (1027), Expect = e-112
 Identities = 205/217 (94%), Positives = 205/217 (94%), Gaps = 12/217 (5%)

Query: 1   MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60
           MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI
Sbjct: 1   MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60

Query: 61  KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSA 120
           KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEA        
Sbjct: 61  KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEA-------- 112

Query: 121 LTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA 180
               EMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA
Sbjct: 113 ----EMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA 168

Query: 181 TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP 217
           TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP
Sbjct: 169 TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP 205


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 24/163 (14%)

Query: 35   NLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIV 94
            NL +   + ++ V +T ++++   K++E     Q +        +   + +LQ+L+ K+ 
Sbjct: 866  NLMKAEQMHQSFVAETSQRIS---KLQEDTSAHQNVVAETLSALEN-KEKELQLLNDKVE 921

Query: 95   ALTAKVQSLQQSCRYMEAELKELSSALTTPEMQK------------EIQELKKECAGYRE 142
               A++Q L++S   +E  LKEL     T  ++K            EI+EL +E      
Sbjct: 922  TEQAEIQELKKSNHLLEDSLKELQLLSETLSLEKKEMSSIISLNKREIEELTQE----NG 977

Query: 143  RLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSD 185
             LK I A+ N    +EK  + ++ + +     +R++  +ELSD
Sbjct: 978  TLKEINASLN----QEKMNLIQKSESFANYIDEREKSISELSD 1016


>gi|94721321 coiled-coil domain containing 11 [Homo sapiens]
          Length = 514

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 29/180 (16%)

Query: 39  EHGLGKAVVVKTLEQLAQQGKIK----EKMYGKQKIYF-----------ADQDQFDMVSD 83
           E  L   +V + L+ L ++   K    E M  +QKIY            A + +FD + +
Sbjct: 306 EQDLNMKLVQRALQDLQEEADKKKQKREDMIREQKIYHKYLAQRREEEKAQEKEFDRILE 365

Query: 84  ADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRER 143
            D      K   L  K + L+      EA  + +   + T ++Q + ++L++E     ER
Sbjct: 366 ED------KAKKLAEKDKELRLE---KEARRQLVDEVMCTRKLQVQ-EKLQREAKEQEER 415

Query: 144 L---KNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFE 200
               K+I  +   +  EEKE   R RQ+  +E+RK+ +M         E   + K++ FE
Sbjct: 416 AMEQKHINESLKELNCEEKENFAR-RQRLAQEYRKQLQMQIAYQQQSQEAEKEEKRREFE 474


>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 601

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  +Q L+ +   L   +  +++S RY
Sbjct: 98  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 157

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L N+ A     T ++K      R K
Sbjct: 158 FEEKSKDLAVRLQHSLQRKGELESV----------LSNVMA-----TQKKKANQLSSRSK 202

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 203 ARTEWKLEQSMREE---ALLKVQLTQLKESFQQVQLERDE 239


>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 630

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  +Q L+ +   L   +  +++S RY
Sbjct: 99  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 158

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L N+ A     T ++K      R K
Sbjct: 159 FEEKSKDLAVRLQHSLQRKGELESV----------LSNVMA-----TQKKKANQLSSRSK 203

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 204 ARTEWKLEQSMREE---ALLKVQLTQLKESFQQVQLERDE 240


>gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 [Homo sapiens]
          Length = 602

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  +Q L+ +   L   +  +++S RY
Sbjct: 98  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKGKLNTDLYHMKRSLRY 157

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L N+ A     T ++K      R K
Sbjct: 158 FEEKSKDLAVCLQHSLQRKGELESV----------LSNVMA-----TQKKKANQLSSRSK 202

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 203 ARTEWKLEQSMREE---ALLKVQLTQLKESFQQVQLERDE 239


>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  +Q L+ +   L   +  +++S RY
Sbjct: 99  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKGKLNTDLYHMKRSLRY 158

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L N+ A     T ++K      R K
Sbjct: 159 FEEKSKDLAVCLQHSLQRKGELESV----------LSNVMA-----TQKKKANQLSSRSK 203

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 204 ARTEWKLEQSMREE---ALLKVQLTQLKESFQQVQLERDE 240


>gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein 3
           isoform 2 [Homo sapiens]
          Length = 602

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  +Q L+ +   L   +  +++S RY
Sbjct: 98  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 157

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L N+ A     T ++K      R K
Sbjct: 158 FEEKSKDLAVRLQHSLQRKGELESV----------LSNVMA-----TQKKKANQLSSRSK 202

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 203 ARTEWKLEQSMREE---ALLKVQLTQFKESFQQVQLERDE 239


>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
           isoform 1 [Homo sapiens]
          Length = 632

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  +Q L+ +   L   +  +++S RY
Sbjct: 99  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 158

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L N+ A     T ++K      R K
Sbjct: 159 FEEKSKDLAVRLQHSLQRKGELESV----------LSNVMA-----TQKKKANQLSSRSK 203

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 204 ARTEWKLEQSMREE---ALLKVQLTQFKESFQQVQLERDE 240


>gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo
           sapiens]
          Length = 600

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 9/164 (5%)

Query: 27  YSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADL 86
           + +Q+   +LQ+++    +   KT + ++   +++E++   ++     +++   +     
Sbjct: 360 HKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQ---- 415

Query: 87  QVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKN 146
           Q L G+I AL  ++  L + C  +E ELK  S       +Q+E+Q  K   +  R  L+ 
Sbjct: 416 QELGGRIGALQLQLSQLHEQCSSLEKELK--SEKEQRQALQRELQHEKDTSSLLRMELQQ 473

Query: 147 IKAATNHVTPEEKEQVYRERQKYCKEWRKR-KRMATELSDAILE 189
           ++     +   + E+   E QK C+E  +  + M   LS + L+
Sbjct: 474 VEGLKKELRELQDEKA--ELQKICEEQEQALQEMGLHLSQSKLK 515


>gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo
           sapiens]
          Length = 600

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 9/164 (5%)

Query: 27  YSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADL 86
           + +Q+   +LQ+++    +   KT + ++   +++E++   ++     +++   +     
Sbjct: 360 HKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQ---- 415

Query: 87  QVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKN 146
           Q L G+I AL  ++  L + C  +E ELK  S       +Q+E+Q  K   +  R  L+ 
Sbjct: 416 QELGGRIGALQLQLSQLHEQCSSLEKELK--SEKEQRQALQRELQHEKDTSSLLRMELQQ 473

Query: 147 IKAATNHVTPEEKEQVYRERQKYCKEWRKR-KRMATELSDAILE 189
           ++     +   + E+   E QK C+E  +  + M   LS + L+
Sbjct: 474 VEGLKKELRELQDEKA--ELQKICEEQEQALQEMGLHLSQSKLK 515


>gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo
           sapiens]
          Length = 708

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 9/164 (5%)

Query: 27  YSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADL 86
           + +Q+   +LQ+++    +   KT + ++   +++E++   ++     +++   +     
Sbjct: 468 HKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQ---- 523

Query: 87  QVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKN 146
           Q L G+I AL  ++  L + C  +E ELK  S       +Q+E+Q  K   +  R  L+ 
Sbjct: 524 QELGGRIGALQLQLSQLHEQCSSLEKELK--SEKEQRQALQRELQHEKDTSSLLRMELQQ 581

Query: 147 IKAATNHVTPEEKEQVYRERQKYCKEWRKR-KRMATELSDAILE 189
           ++     +   + E+   E QK C+E  +  + M   LS + L+
Sbjct: 582 VEGLKKELRELQDEKA--ELQKICEEQEQALQEMGLHLSQSKLK 623


>gi|169208016 PREDICTED: similar to golgi autoantigen, golgin
           subfamily a, 8E isoform 1 [Homo sapiens]
          Length = 594

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K    ++ + + V +  +Q L  +   L   +  +++S RY
Sbjct: 91  TIKSLKQQKKQVEHQLEEEKKANNERQKAERVLEVQIQTLIIQKEELNTDLYHMERSLRY 150

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q     C G  ER  +   AT     ++K        K 
Sbjct: 151 FEEESKDLAVRL-----QHSLQ-----CKGELERALSAVIATE----KKKANQLSSCSKA 196

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW   + +  +   A+L+      K+ F+++ +E DE
Sbjct: 197 HTEWELEQSLQDQ---ALLKAQLTQLKESFQQLQLERDE 232


>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
           subfamily a, 8E isoform 2 [Homo sapiens]
          Length = 631

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K    ++ + + V +  +Q L  +   L   +  +++S RY
Sbjct: 99  TIKSLKQQKKQVEHQLEEEKKANNERQKAERVLEVQIQTLIIQKEELNTDLYHMERSLRY 158

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q     C G  ER  +   AT     ++K        K 
Sbjct: 159 FEEESKDLAVRL-----QHSLQ-----CKGELERALSAVIATE----KKKANQLSSCSKA 204

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW   + +  +   A+L+      K+ F+++ +E DE
Sbjct: 205 HTEWELEQSLQDQ---ALLKAQLTQLKESFQQLQLERDE 240


>gi|95089461 discs large homolog 5 [Homo sapiens]
          Length = 1919

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 27/187 (14%)

Query: 36  LQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDAD-----LQVLD 90
           LQ E    +   VKT ++  +  + ++ +Y + K+  +++DQ  ++S+ D     +++ +
Sbjct: 400 LQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQ--VISELDKLQTEVELAE 457

Query: 91  GKIVALTAKVQSLQQSCRYMEAELKELSSALT--TPEMQKEIQELKKECAGYRERLKNIK 148
            K+ + T++ ++  +    MEA L+++   +T       KE++ L+K+C    + LK   
Sbjct: 458 SKLKSSTSEKKAANEE---MEA-LRQIKDTVTMDAGRANKEVEILRKQCKALCQELKEAL 513

Query: 149 AATNHVTPEEKEQVYRERQKYCKE-----------WRKRKRMATELSDAI--LEGYPKSK 195
              + V    ++  ++ER K   E            R+R R  +EL++A+  L+   K K
Sbjct: 514 QEAD-VAKCRRDWAFQERDKIVAERDSIRTLCDNLRRERDRAVSELAEALRSLDDTRKQK 572

Query: 196 KQFFEEV 202
                E+
Sbjct: 573 NDVSREL 579


>gi|4504063 golgin 97 [Homo sapiens]
          Length = 767

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 7/141 (4%)

Query: 30  QDVFGNLQREHGLGKAVVVKTLEQLAQQGK----IKEKMYGKQKIYFADQDQFDMVSDAD 85
           ++  G +++E       + +T E+L    +    + +K+   Q+ Y   ++Q D V  A 
Sbjct: 192 EESLGKMEQELEARTRELSRTQEELMNSNQMSSDLSQKLEELQRHYSTLEEQRDHVI-AS 250

Query: 86  LQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLK 145
               + KI AL  K Q LQ   + +  +L+++++   T E +  I  L+++ A   +RL+
Sbjct: 251 KTGAESKITALEQKEQELQALIQQLSIDLQKVTAE--TQEKEDVITHLQEKVASLEKRLE 308

Query: 146 NIKAATNHVTPEEKEQVYRER 166
              +   HV    KE+   E+
Sbjct: 309 QNLSGEEHVQELLKEKTLAEQ 329



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 35/202 (17%)

Query: 17  LRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKT------LEQLAQQGKIK----EKMYG 66
           +R  QEQN  + +       +   GL  A+  K       ++QL ++  I     ++M  
Sbjct: 103 MRKFQEQNETFQAN----RAKMAEGLALALARKDQEWSEKMDQLEKEKNILTAQLQEMKN 158

Query: 67  KQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELS-------- 118
           +    F  +D+ D +     Q L      L  K +SL +  + +EA  +ELS        
Sbjct: 159 QSMNLFQRRDEMDELEGFQQQELSKIKHMLLKKEESLGKMEQELEARTRELSRTQEELMN 218

Query: 119 SALTTPEMQKEIQELKKECAGYRERLKNIKA----ATNHVTP-EEKEQVYR--------E 165
           S   + ++ ++++EL++  +   E+  ++ A    A + +T  E+KEQ  +        +
Sbjct: 219 SNQMSSDLSQKLEELQRHYSTLEEQRDHVIASKTGAESKITALEQKEQELQALIQQLSID 278

Query: 166 RQKYCKEWRKRKRMATELSDAI 187
            QK   E ++++ + T L + +
Sbjct: 279 LQKVTAETQEKEDVITHLQEKV 300


>gi|21687119 spermatogenesis associated 18 homolog [Homo sapiens]
          Length = 538

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 18/165 (10%)

Query: 55  AQQGK-IKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAE 113
           A  GK +  K+   Q  +  ++ +     D D+Q LD  + +  ++   +Q      E  
Sbjct: 89  ASLGKSVDSKVPSLQDTFDRERHKDPSPRDRDMQQLDSNLNSTRSQCNQVQDDLVETEKN 148

Query: 114 LKELS--SALTTPEMQKEIQELKKECAGYRERLKNIKAATN--HVTPEEKEQVYRERQKY 169
           L+E    SA++    ++EI +LKK+       LK+++A  +  H   +++    R  + +
Sbjct: 149 LEESKNRSAISLLAAEEEINQLKKQ-------LKSLQAQEDARHRNTDQRSSENRRSEPW 201

Query: 170 CKEWRKR------KRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             E RKR      K+ A +     +  Y K  +   EE+ + + E
Sbjct: 202 SLEERKREQWNSLKQNADQQDTEAMSDYKKQLRNLKEEIAVLSAE 246


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 14/181 (7%)

Query: 20   LQEQNRPYSS-QDVFGNLQREHGLGKAVVVKTLEQ----LAQQGKIKEKMYGKQKIYFAD 74
            LQE+    +S Q+   N+Q    L K  ++ T +     L++Q ++ +K   +    F D
Sbjct: 1859 LQEKREAVNSLQEELANVQDHLNLAKQDLLHTTKHQDVLLSEQTRL-QKDISEWANRFED 1917

Query: 75   QDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPE--MQKEIQE 132
              + +      LQVL  +I     K+   +   + ++ E +   S L T +  ++++  +
Sbjct: 1918 CQKEEETKQQQLQVLQNEIEENKLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQ 1977

Query: 133  LKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRK----RKRMATELSDAIL 188
            L+KE    + +L  + +    +  EE+ +  +E +++C+   K     KR  +E    ++
Sbjct: 1978 LEKELTDQKSKLDQVLSKV--LAAEERVRTLQEEERWCESLEKTLSQTKRQLSEREQQLV 2035

Query: 189  E 189
            E
Sbjct: 2036 E 2036



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 26/158 (16%)

Query: 51   LEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYM 110
            L  L    K  E+   KQ+    + ++     D+D Q L  K   LT ++Q LQ+     
Sbjct: 1498 LRSLQADAKDLEQHKIKQEEILKEINKIVAAKDSDFQCLSKKKEKLTEELQKLQKDIEMA 1557

Query: 111  E---------------------AELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKA 149
            E                     AEL++L S +T+   Q+E+  L ++    +E L  ++ 
Sbjct: 1558 ERNEDHHLQVLKESEVLLQAKRAELEKLKSQVTS--QQQEMAVLDRQLGHKKEELHLLQG 1615

Query: 150  ATNHVTPEEKEQV---YRERQKYCKEWRKRKRMATELS 184
            +      + +E +     E  + C   R+ K +  ELS
Sbjct: 1616 SMVQAKADLQEALRLGETEVTEKCNHIREVKSLLEELS 1653



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 52  EQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQV-LDGKIVALTAKVQSLQQSCRYM 110
           E   ++ K++E+M  +Q+     Q++F    +  L+  ++       A++Q ++    Y+
Sbjct: 860 EAQVRERKLQEEMALQQEKLATGQEEFRQACERALEARMNFDKRQHEARIQQMENEIHYL 919

Query: 111 EAELKELS--SALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVY---RE 165
           +  LK +     LT  ++Q+  +E ++  A  RE  K  K        + +EQV+   +E
Sbjct: 920 QENLKSMEEIQGLTDLQLQEADEEKERILAQLRELEKKKKLE----DAKSQEQVFGLDKE 975

Query: 166 RQKYCKEWRKRKRMAT 181
            +K  K      ++AT
Sbjct: 976 LKKLKKAVATSDKLAT 991


>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 595

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K    ++ + +   +  +Q L  +   L   +  +++S RY
Sbjct: 91  TIKSLKQQKKQVEHQLEEEKKANNERQKAERELEVQIQTLIIQKEELNTDLYHMERSLRY 150

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q     C G  ER  +   AT     ++K        K 
Sbjct: 151 FEEESKDLAVRL-----QHSLQ-----CKGELERALSAVIATE----KKKANQLSSCSKA 196

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW   + +  +   A+L+      K+ F+++ +E DE
Sbjct: 197 HTEWELEQSLQDQ---ALLKAQLTQLKESFQQLQLERDE 232


>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 4 [Homo sapiens]
          Length = 632

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 17/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K    ++ + +   +  +Q L  +   L   +  +++S RY
Sbjct: 99  TIKSLKQQKKQVEHQLEEEKKANNERQKAERELEVQIQTLIIQKEELNTDLYHMERSLRY 158

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q     C G  ER  +   AT     ++K        K 
Sbjct: 159 FEEESKDLAVRL-----QHSLQ-----CKGELERALSAVIATE----KKKANQLSSCSKA 204

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW   + +  +   A+L+      K+ F+++ +E DE
Sbjct: 205 HTEWELEQSLQDQ---ALLKAQLTQLKESFQQLQLERDE 240


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 37/176 (21%), Positives = 85/176 (48%), Gaps = 13/176 (7%)

Query: 44   KAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSL 103
            K   + T+++  Q   I +K+  K +  +  ++QF++   +++Q    ++       ++ 
Sbjct: 1503 KETEISTIQK--QLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFKEHRKAK 1560

Query: 104  QQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAA----TNHVTPEEK 159
              + + +E+++ EL++ L   E Q+EIQ + KE    +E +K ++ A     + +    K
Sbjct: 1561 DSALQSIESKMLELTNRLQ--ESQEEIQIMIKE----KEEMKRVQEALQIERDQLKENTK 1614

Query: 160  EQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQF-FEEVGIETDEDYNVTL 214
            E V + ++   KE++  K  A   +   +      K+QF  +++ +E  E  N+ L
Sbjct: 1615 EIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRL 1670



 Score = 33.9 bits (76), Expect = 0.11
 Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 18/154 (11%)

Query: 67   KQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEM 126
            KQ+   A +    +  + +L     ++  +  K++   Q  +  + +L  +   ++  EM
Sbjct: 1096 KQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMS--EM 1153

Query: 127  QKEIQELKKECAGYRERLKNIKAATNHVTPEEKE--QVYRERQKYCKEWRKRKRMATELS 184
            QK+I E++      +  LKN +    H+  E  E  Q   E  +  K   K +++  EL 
Sbjct: 1154 QKKINEIEN----LKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQ 1209

Query: 185  DAI------LEGYPKSKKQFFEEVGIETDEDYNV 212
             +       L GY +      E  G++T E+  +
Sbjct: 1210 KSFETERDHLRGYIRE----IEATGLQTKEELKI 1239



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 12/115 (10%)

Query: 75   QDQFDMVSDADLQVLDG--KIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQE 132
            ++Q + ++  ++  +D   K   L  K+Q LQQ C     EL++L        M   I+E
Sbjct: 2185 EEQHESINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLK---LNQNMDLHIEE 2241

Query: 133  LKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAI 187
            + K+ +       +IK     V    KE       ++ +EW   +    +L + I
Sbjct: 2242 ILKDFS--ESEFPSIKTEFQQVLSNRKEMT-----QFLEEWLNTRFDIEKLKNGI 2289



 Score = 29.3 bits (64), Expect = 2.7
 Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 10/137 (7%)

Query: 38   REHGLGKAVVVKTLEQ--LAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVA 95
            +EH   K   ++++E   L    +++E     Q I   ++++   V +A LQ+   ++  
Sbjct: 1554 KEHRKAKDSALQSIESKMLELTNRLQESQEEIQ-IMIKEKEEMKRVQEA-LQIERDQLKE 1611

Query: 96   LTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVT 155
             T ++ +  +  +  E +  ++++   T E   EI+ LK++    +  L+NI+     +T
Sbjct: 1612 NTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLT 1671

Query: 156  P------EEKEQVYRER 166
                   EE   V +ER
Sbjct: 1672 QILHENLEEMRSVTKER 1688


>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 602

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  LQ L+ +   L   +  +++S RY
Sbjct: 98  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQLQTLNIQKEELNTDLYHMKRSLRY 157

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L ++ A     T ++K        K
Sbjct: 158 FEEKSKDLAVRLQHSLQRKGELESV----------LSDVMA-----TQKKKANQLSSPSK 202

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 203 AGTEWKLEQSMREE---ALLKVQLTQLKESFQQVQLERDE 239


>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 19/160 (11%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K  E    ++K     + +   V +  LQ L+ +   L   +  +++S RY
Sbjct: 99  TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQLQTLNIQKEELNTDLYHMKRSLRY 158

Query: 110 MEAELKELSSALTTPEMQK-EIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQK 168
            E + K+L+  L     +K E++ +          L ++ A     T ++K        K
Sbjct: 159 FEEKSKDLAVRLQHSLQRKGELESV----------LSDVMA-----TQKKKANQLSSPSK 203

Query: 169 YCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
              EW+  + M  E   A+L+      K+ F++V +E DE
Sbjct: 204 AGTEWKLEQSMREE---ALLKVQLTQLKESFQQVQLERDE 240


>gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 547

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 16/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K       ++K    ++ + +   +  +Q L+ +   L   +   ++S RY
Sbjct: 111 TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQKGKLNTDLYHTKRSLRY 170

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q         +  L+   +A      ++ E+ +  R K 
Sbjct: 171 FEEESKDLAVRL-----QHSLQR--------KGELERALSAVTATQKKKAERQFSSRSKA 217

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW+  + M  +   A+L+      K+  +EV +E DE
Sbjct: 218 RTEWKLEQSMREQ---ALLKAQLTQLKESLKEVQLERDE 253


>gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 3 [Homo sapiens]
          Length = 601

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K       ++K    ++ + +   +  +Q L+ +   L   +   ++S RY
Sbjct: 103 TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQKGKLNTDLYHTKRSLRY 162

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q       G  ER  +   AT     ++K + +  R K 
Sbjct: 163 FEEESKDLAVRL-----QHSLQR-----KGELERALSAVTATQ----KKKAERFSSRSKA 208

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW+  + M  +   A+L+      K+  +EV +E DE
Sbjct: 209 RTEWKLEQSMREQ---ALLKAQLTQLKESLKEVQLERDE 244


>gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 4 [Homo sapiens]
          Length = 590

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K       ++K    ++ + +   +  +Q L+ +   L   +   ++S RY
Sbjct: 91  TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQKGKLNTDLYHTKRSLRY 150

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q       G  ER  +   AT     ++K + +  R K 
Sbjct: 151 FEEESKDLAVRL-----QHSLQR-----KGELERALSAVTATQ----KKKAERFSSRSKA 196

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW+  + M  +   A+L+      K+  +EV +E DE
Sbjct: 197 RTEWKLEQSMREQ---ALLKAQLTQLKESLKEVQLERDE 232


>gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 629

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 17/159 (10%)

Query: 50  TLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRY 109
           T++ L QQ K       ++K    ++ + +   +  +Q L+ +   L   +   ++S RY
Sbjct: 103 TIKSLKQQKKQVVHQLEEEKKANNEKQKAERELEVQIQRLNIQKGKLNTDLYHTKRSLRY 162

Query: 110 MEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKY 169
            E E K+L+  L     Q  +Q       G  ER  +   AT     ++K + +  R K 
Sbjct: 163 FEEESKDLAVRL-----QHSLQR-----KGELERALSAVTATQ----KKKAERFSSRSKA 208

Query: 170 CKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208
             EW+  + M  +   A+L+      K+  +EV +E DE
Sbjct: 209 RTEWKLEQSMREQ---ALLKAQLTQLKESLKEVQLERDE 244


>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
           sapiens]
          Length = 1133

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 11/168 (6%)

Query: 30  QDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVL 89
           Q     LQ E      V  K +E+  +   +K K   ++K+Y   +++ D+ +    +  
Sbjct: 519 QAASSQLQVEQNKVTTVTEKLIEETKRA--LKSKTDVEEKMYSVTKERDDLKNKLKAEEE 576

Query: 90  DG-----KIVALTAKVQSLQQSCR-YMEAELKELSSALTTPEMQK--EIQELKKECAGYR 141
            G     ++  L  ++QSL+   + +++ +L + S   TT   Q+  +I+EL +E    +
Sbjct: 577 KGNDLLSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLK 636

Query: 142 ERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILE 189
            +LK++KA  + +   E E    ER +Y  E  K + ++ EL    +E
Sbjct: 637 LKLKDMKAIEDDLMKTEDEYETLER-RYANERDKAQFLSKELEHVKME 683


>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
           sapiens]
          Length = 893

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 11/168 (6%)

Query: 30  QDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVL 89
           Q     LQ E      V  K +E+  +   +K K   ++K+Y   +++ D+ +    +  
Sbjct: 279 QAASSQLQVEQNKVTTVTEKLIEETKRA--LKSKTDVEEKMYSVTKERDDLKNKLKAEEE 336

Query: 90  DG-----KIVALTAKVQSLQQSCR-YMEAELKELSSALTTPEMQK--EIQELKKECAGYR 141
            G     ++  L  ++QSL+   + +++ +L + S   TT   Q+  +I+EL +E    +
Sbjct: 337 KGNDLLSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLK 396

Query: 142 ERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILE 189
            +LK++KA  + +   E E    ER +Y  E  K + ++ EL    +E
Sbjct: 397 LKLKDMKAIEDDLMKTEDEYETLER-RYANERDKAQFLSKELEHVKME 443


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,605,687
Number of Sequences: 37866
Number of extensions: 316999
Number of successful extensions: 2039
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 1746
Number of HSP's gapped (non-prelim): 556
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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