RUFY1 37569

Name: RUFY1	Sequence: fasta or formatted (600aa)		NCBI GI: 94721330
Description: RUN and FYVE domain-containing 1 isoform b		Referenced in: Additional Interaction Domain Families Zinc Finger Proteins
Other entries for this name: alt mRNA [600aa] RUN and FYVE domain-containing 1 isoform b alt prot [708aa] RUN and FYVE domain-containing 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 31 2 C cysteine 2.7 16 1 D aspartate 4.7 28 2 E glutamate 12.5 75 3 F phenylalanine 1.8 11 2 G glycine 4.3 26 2 H histidine 3.3 20 2 I isoleucine 3.3 20 1 K lysine 9.2 55 2 L leucine 14.5 87 3 M methionine 3.5 21 2 N asparagine 3.0 18 1 P proline 1.3 8 1 Q glutamine 8.7 52 3 R arginine 4.8 29 2 S serine 7.0 42 2 T threonine 3.5 21 1 V valine 4.8 29 2 W tryptophan 0.5 3 1 Y tyrosine 1.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RUN and FYVE domain-containing 1 isoform b RUFY1 1.000 RUN and FYVE domain-containing 1 isoform b RUFY1 1.000 RUN and FYVE domain-containing 1 isoform a RUFY2 0.629 RUN and FYVE domain-containing 2 isoform a RUFY3 0.461 RUN and FYVE domain containing 3 isoform 1 RUFY3 0.382 RUN and FYVE domain containing 3 isoform 3 RUFY3 0.380 RUN and FYVE domain containing 3 isoform 2 RUFY2 0.356 RUN and FYVE domain-containing 2 isoform b EEA1 0.088 early endosome antigen 1, 162kD FYCO1 0.080 FYVE and coiled-coil domain containing 1 RUNDC3B 0.070 RUN domain containing 3B isoform c RUNDC3A 0.069 RUN domain containing 3A isoform 3 RUNDC3B 0.069 RUN domain containing 3B isoform b RUNDC3A 0.066 RUN domain containing 3A isoform 1 RUNDC3A 0.066 RUN domain containing 3A isoform 2 RUNDC3B 0.062 RUN domain containing 3B isoform a DSP 0.058 desmoplakin isoform I CCDC88A 0.058 coiled-coil domain containing 88A isoform 2 CCDC88A 0.058 coiled-coil domain containing 88A isoform 1 MYH9 0.055 myosin, heavy polypeptide 9, non-muscle MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... GRIPAP1 0.054 GRIP1 associated protein 1 isoform 2 MYH6 0.054 myosin heavy chain 6 MYH1 0.053 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH10 0.053 myosin, heavy polypeptide 10, non-muscle LOC100133758 0.052 PREDICTED: hypothetical protein, partial LOC440243 0.051 PREDICTED: Putative golgin subfamily A member 6-lik... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.