Guide to the Human Genome
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Name: SH3GLB1 Sequence: fasta or formatted (365aa) NCBI GI: 7705773
Description:

SH3-containing protein SH3GLB1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         31           2
 C cysteine            1.4          5           1
 D aspartate           4.9         18           1
 E glutamate           7.9         29           2
 F phenylalanine       3.0         11           1
 G glycine             5.2         19           1
 H histidine           1.1          4           2
 I isoleucine          4.9         18           1
 K lysine              6.8         25           2
 L leucine            12.1         44           3
 M methionine          2.5          9           1
 N asparagine          6.0         22           3
 P proline             3.3         12           1
 Q glutamine           4.9         18           1
 R arginine            4.9         18           1
 S serine              7.4         27           2
 T threonine           7.1         26           1
 V valine              4.1         15           2
 W tryptophan          0.5          2           1
 Y tyrosine            3.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-containing protein SH3GLB1 
SH3GLB2               0.637   SH3-domain GRB2-like endophilin B2 
SH3GL1                0.146   SH3-domain GRB2-like 1 
SH3GL3                0.126   SH3-domain GRB2-like 3 
SH3GL2                0.126   SH3-domain GRB2-like 2 
RICH2                 0.038   Rho GTPase-activating protein RICH2 
C1orf113              0.030   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.030   SH3 domain-containing protein C1orf113 isoform 2 [H...
SH3D19                0.029   SH3 domain containing 19 isoform c 
SH3D19                0.029   SH3 domain containing 19 isoform b 
SH3D19                0.029   SH3 domain containing 19 isoform a 
PSTPIP1               0.027   proline-serine-threonine phosphatase interacting pro...
NEBL                  0.026   nebulette non-muscle isoform 
SNX33                 0.026   sorting nexin 33 
NEBL                  0.025   nebulette sarcomeric isoform 
ITSN1                 0.023   intersectin 1 isoform ITSN-s 
ITSN1                 0.023   intersectin 1 isoform ITSN-l 
ARHGAP10              0.023   Rho GTPase activating protein 10 
VAV2                  0.022   vav 2 guanine nucleotide exchange factor isoform 1 ...
VAV2                  0.022   vav 2 guanine nucleotide exchange factor isoform 2 [...
STAM                  0.020   signal transducing adaptor molecule 1 
SORBS1                0.020   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.020   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.020   sorbin and SH3 domain containing 1 isoform 5 
SORBS1                0.020   sorbin and SH3 domain containing 1 isoform 4 
SORBS1                0.020   sorbin and SH3 domain containing 1 isoform 3 
RUSC1                 0.020   RUN and SH3 domain containing 1 isoform c 
RUSC1                 0.020   RUN and SH3 domain containing 1 isoform b 
RUSC1                 0.020   RUN and SH3 domain containing 1 isoform a 
RUSC1                 0.020   RUN and SH3 domain containing 1 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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