Guide to the Human Genome
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Name: PSTPIP1 Sequence: fasta or formatted (416aa) NCBI GI: 20149528
Description:

proline-serine-threonine phosphatase interacting protein 1

Referenced in:

Macrophages and Monocytes
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         35           2
 C cysteine            1.9          8           1
 D aspartate           5.3         22           2
 E glutamate          10.8         45           2
 F phenylalanine       2.6         11           1
 G glycine             5.0         21           2
 H histidine           1.4          6           1
 I isoleucine          3.6         15           1
 K lysine              6.2         26           2
 L leucine             9.1         38           2
 M methionine          2.2          9           2
 N asparagine          2.6         11           1
 P proline             3.6         15           2
 Q glutamine           8.2         34           2
 R arginine            7.2         30           1
 S serine              7.0         29           2
 T threonine           5.5         23           2
 V valine              4.3         18           1
 W tryptophan          1.2          5           2
 Y tyrosine            3.6         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline-serine-threonine phosphatase interacting pro... 
PSTPIP2               0.331   proline-serine-threonine phosphatase interacting pr...
FCHO2                 0.093   FCH domain only 2 isoform a 
PACSIN3               0.092   protein kinase C and casein kinase substrate in neur...
FCHO1                 0.087   FCH domain only 1 isoform b 
FCHO1                 0.087   FCH domain only 1 isoform b 
FCHO1                 0.087   FCH domain only 1 isoform a 
PACSIN1               0.086   protein kinase C and casein kinase substrate in neur...
GAS7                  0.083   growth arrest-specific 7 isoform d 
GAS7                  0.083   growth arrest-specific 7 isoform c 
GAS7                  0.083   growth arrest-specific 7 isoform b 
GAS7                  0.083   growth arrest-specific 7 isoform a 
FCHO2                 0.069   FCH domain only 2 isoform b 
FCHO1                 0.055   FCH domain only 1 isoform c 
PACSIN2               0.055   protein kinase C and casein kinase substrate in neu...
MYO1F                 0.043   myosin IF 
FNBP1                 0.043   formin binding protein 1 
MYO1E                 0.042   myosin IE 
SORBS1                0.042   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.042   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.042   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.042   sorbin and SH3 domain containing 1 isoform 1 
SH3PXD2B              0.042   SH3 and PX domains 2B 
FNBP1L                0.040   formin binding protein 1-like isoform 1 
FNBP1L                0.040   formin binding protein 1-like isoform 2 
NCF1                  0.040   neutrophil cytosolic factor 1 
C1orf113              0.040   SH3 domain-containing protein C1orf113 isoform 1 [H...
NOSTRIN               0.038   nitric oxide synthase trafficker isoform 2 
SORBS1                0.038   sorbin and SH3 domain containing 1 isoform 5 
DNMBP                 0.038   dynamin binding protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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