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Search of human proteins with 14110378
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14110378 neighbor of BRCA1 gene 1 [Homo sapiens]
(966 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14110378 neighbor of BRCA1 gene 1 [Homo sapiens] 1952 0.0
gi|14110375 neighbor of BRCA1 gene 1 [Homo sapiens] 1952 0.0
gi|14110381 neighbor of BRCA1 gene 1 [Homo sapiens] 1952 0.0
gi|214830451 sequestosome 1 isoform 2 [Homo sapiens] 55 2e-07
gi|214830438 sequestosome 1 isoform 2 [Homo sapiens] 55 2e-07
gi|4505571 sequestosome 1 isoform 1 [Homo sapiens] 55 2e-07
gi|13236514 chromosome 6 open reading frame 106 isoform a [Homo ... 55 4e-07
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 54 7e-07
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 53 1e-06
gi|17975763 myelin transcription factor 1 [Homo sapiens] 52 3e-06
gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... 48 5e-05
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 47 7e-05
gi|4502805 chromogranin A precursor [Homo sapiens] 46 2e-04
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 44 6e-04
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 43 0.001
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 43 0.001
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 43 0.002
gi|41406057 amyloid beta A4 protein isoform c precursor [Homo sa... 42 0.002
gi|41406055 amyloid beta A4 protein isoform b precursor [Homo sa... 42 0.002
gi|4502167 amyloid beta A4 protein isoform a precursor [Homo sap... 42 0.002
gi|209915570 amyloid beta A4 protein isoform e precursor [Homo s... 42 0.002
gi|209915573 amyloid beta A4 protein isoform f precursor [Homo s... 42 0.002
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 41 0.005
gi|164419758 bromodomain containing 2 [Homo sapiens] 41 0.006
gi|4826806 bromodomain containing 2 [Homo sapiens] 41 0.006
gi|210032580 SET domain containing 1B [Homo sapiens] 40 0.008
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 40 0.011
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 40 0.011
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 40 0.011
gi|82830424 gon-4-like isoform a [Homo sapiens] 40 0.011
>gi|14110378 neighbor of BRCA1 gene 1 [Homo sapiens]
Length = 966
Score = 1952 bits (5058), Expect = 0.0
Identities = 966/966 (100%), Positives = 966/966 (100%)
Query: 1 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS 60
MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS
Sbjct: 1 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS 60
Query: 61 QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV 120
QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV
Sbjct: 61 QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV 120
Query: 121 LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK 180
LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK
Sbjct: 121 LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK 180
Query: 181 LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC 240
LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC
Sbjct: 181 LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC 240
Query: 241 EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA 300
EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA
Sbjct: 241 EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA 300
Query: 301 EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP 360
EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP
Sbjct: 301 EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP 360
Query: 361 LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT 420
LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT
Sbjct: 361 LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT 420
Query: 421 LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP 480
LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP
Sbjct: 421 LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP 480
Query: 481 FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN 540
FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN
Sbjct: 481 FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN 540
Query: 541 VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE 600
VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE
Sbjct: 541 VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE 600
Query: 601 KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD 660
KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD
Sbjct: 601 KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD 660
Query: 661 AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE 720
AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE
Sbjct: 661 AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE 720
Query: 721 VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG 780
VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG
Sbjct: 721 VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG 780
Query: 781 ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV 840
ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV
Sbjct: 781 ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV 840
Query: 841 TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL 900
TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL
Sbjct: 841 TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL 900
Query: 901 FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND 960
FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND
Sbjct: 901 FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND 960
Query: 961 WYSQRY 966
WYSQRY
Sbjct: 961 WYSQRY 966
>gi|14110375 neighbor of BRCA1 gene 1 [Homo sapiens]
Length = 966
Score = 1952 bits (5058), Expect = 0.0
Identities = 966/966 (100%), Positives = 966/966 (100%)
Query: 1 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS 60
MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS
Sbjct: 1 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS 60
Query: 61 QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV 120
QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV
Sbjct: 61 QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV 120
Query: 121 LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK 180
LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK
Sbjct: 121 LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK 180
Query: 181 LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC 240
LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC
Sbjct: 181 LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC 240
Query: 241 EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA 300
EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA
Sbjct: 241 EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA 300
Query: 301 EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP 360
EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP
Sbjct: 301 EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP 360
Query: 361 LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT 420
LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT
Sbjct: 361 LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT 420
Query: 421 LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP 480
LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP
Sbjct: 421 LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP 480
Query: 481 FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN 540
FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN
Sbjct: 481 FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN 540
Query: 541 VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE 600
VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE
Sbjct: 541 VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE 600
Query: 601 KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD 660
KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD
Sbjct: 601 KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD 660
Query: 661 AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE 720
AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE
Sbjct: 661 AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE 720
Query: 721 VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG 780
VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG
Sbjct: 721 VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG 780
Query: 781 ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV 840
ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV
Sbjct: 781 ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV 840
Query: 841 TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL 900
TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL
Sbjct: 841 TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL 900
Query: 901 FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND 960
FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND
Sbjct: 901 FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND 960
Query: 961 WYSQRY 966
WYSQRY
Sbjct: 961 WYSQRY 966
>gi|14110381 neighbor of BRCA1 gene 1 [Homo sapiens]
Length = 966
Score = 1952 bits (5058), Expect = 0.0
Identities = 966/966 (100%), Positives = 966/966 (100%)
Query: 1 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS 60
MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS
Sbjct: 1 MEPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINS 60
Query: 61 QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV 120
QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV
Sbjct: 61 QGEYEEALKMAVKQGNQLQMQVHEGHHVVDEAPPPVVGAKRLAARAGKKPLAHYSSLVRV 120
Query: 121 LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK 180
LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK
Sbjct: 121 LGSDMKTPEDPAVQSFPLVPCDTDQPQDKPPDWFTSYLETFREQVVNETVEKLEQKLHEK 180
Query: 181 LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC 240
LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC
Sbjct: 181 LVLQNPSLGSCPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNIC 240
Query: 241 EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA 300
EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA
Sbjct: 241 EDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLQKQVDKNFLKA 300
Query: 301 EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP 360
EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP
Sbjct: 301 EKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTLMLP 360
Query: 361 LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT 420
LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT
Sbjct: 361 LQPCTSVMPMLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLT 420
Query: 421 LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP 480
LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP
Sbjct: 421 LASTEKKDVLVPCLKAGHVGVVSVEFIAPALEGTYTSHWRLSHKGQQFGPRVWCSIIVDP 480
Query: 481 FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN 540
FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN
Sbjct: 481 FPSEESPDNIEKGMISSSKTDDLTCQQEETFLLAKEERQLGEVTEQTEGTAACIPQKAKN 540
Query: 541 VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE 600
VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE
Sbjct: 541 VASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDVTPCMSPLPHDSPLIE 600
Query: 601 KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD 660
KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD
Sbjct: 601 KPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLD 660
Query: 661 AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE 720
AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE
Sbjct: 661 AAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE 720
Query: 721 VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG 780
VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG
Sbjct: 721 VQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAG 780
Query: 781 ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV 840
ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV
Sbjct: 781 ERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPV 840
Query: 841 TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL 900
TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL
Sbjct: 841 TIPEVSSVPDQIRGEPRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKAL 900
Query: 901 FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND 960
FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND
Sbjct: 901 FAGPPVTAQPIISEDQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLNNND 960
Query: 961 WYSQRY 966
WYSQRY
Sbjct: 961 WYSQRY 966
>gi|214830451 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 55.5 bits (132), Expect = 2e-07
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 191 CPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNICEDCEAGPYGH 250
C + P ++E P N ++ C+ C +VG RY+CS+CP Y++C CE G
Sbjct: 21 CRRDHRPPCAQEA---PRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEG--KGL 75
Query: 251 DTNHVLLKLRRPVVGSSEPFCHSKY 275
H L P SE F HS++
Sbjct: 76 HRGHTKLAFPSPFGHLSEGFSHSRW 100
>gi|214830438 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 55.5 bits (132), Expect = 2e-07
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 191 CPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNICEDCEAGPYGH 250
C + P ++E P N ++ C+ C +VG RY+CS+CP Y++C CE G
Sbjct: 21 CRRDHRPPCAQEA---PRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEG--KGL 75
Query: 251 DTNHVLLKLRRPVVGSSEPFCHSKY 275
H L P SE F HS++
Sbjct: 76 HRGHTKLAFPSPFGHLSEGFSHSRW 100
>gi|4505571 sequestosome 1 isoform 1 [Homo sapiens]
Length = 440
Score = 55.5 bits (132), Expect = 2e-07
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 191 CPSEVSMPTSEETLFLPENQFSWHIACNNCQRRIVGVRYQCSLCPSYNICEDCEAGPYGH 250
C + P ++E P N ++ C+ C +VG RY+CS+CP Y++C CE G
Sbjct: 105 CRRDHRPPCAQEA---PRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEG--KGL 159
Query: 251 DTNHVLLKLRRPVVGSSEPFCHSKY 275
H L P SE F HS++
Sbjct: 160 HRGHTKLAFPSPFGHLSEGFSHSRW 184
>gi|13236514 chromosome 6 open reading frame 106 isoform a [Homo
sapiens]
Length = 298
Score = 54.7 bits (130), Expect = 4e-07
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 372 SAAFVDE-NLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVL 430
S +FV++ + +G + P T+F+K WR++N+G W LK++ G+ V+
Sbjct: 74 SMSFVEDVTIGEGESIPPDTQFVKTWRIQNSGAEAWPPGVCLKYVGGD---QFGHVNMVM 130
Query: 431 VPCLKAGHVGVVSVEFIAPALEGTYTSHWRL-SHKGQQFGPRVWCSIIVD 479
V L+ + VSV+ +P+ G Y WR+ + G +G +W + V+
Sbjct: 131 VRSLEPQEIADVSVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILSVE 180
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 53.9 bits (128), Expect = 7e-07
Identities = 81/328 (24%), Positives = 138/328 (42%), Gaps = 72/328 (21%)
Query: 529 GTAACIPQKAKNVASERELYIPSVDLLTAQDLLSFELLDIN--------IVQELERVPHN 580
G AA P AK + +ER L DL + L E +D+ ++++ E++
Sbjct: 813 GIAAIGP--AKELEAERSLMSSPEDLTKDFEELKAEEVDVTKDIKPQLELIEDEEKLKET 870
Query: 581 TPVDVT-----------PCMSP---------------LPHDSPLIEKPGLGQIEE-ENEG 613
PV+ P SP P + +EK G+ IE+ E+EG
Sbjct: 871 EPVEAYVIQKEREVTKGPAESPDEGITTTEGEGECEQTPEELEPVEKQGVDDIEKFEDEG 930
Query: 614 AGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIR-SLTLD---AAPDHNPPC 669
AGF+ ++ + KAE EE EED G + VC + + S T D A + +
Sbjct: 931 AGFEESSETG-DYEEKAET-EEAEEPEED--GEEHVCVSASKHSPTEDEESAKAEADAYI 986
Query: 670 RQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASS 729
R+K + + A + + +E I E E + EE+ ++E++ ++ ++E +
Sbjct: 987 REK--RESVASGDDRAEEDMDEAIEKGEAE---QSEEEADEEDKAEDAREEEYEPEKMEA 1041
Query: 730 EDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEA--GERLPGG- 786
EDY++ + + + G L+ P + GA+ G+EPA + E LPGG
Sbjct: 1042 EDYVMAVVD--KAAEAGGAEEQYGFLTTPTKQLGAQ-----SPGREPASSIHDETLPGGS 1094
Query: 787 ------------ENQPQEHSISDILTTS 802
E+QP+E + + T S
Sbjct: 1095 ESEATASDEENREDQPEEFTATSGYTQS 1122
Score = 31.6 bits (70), Expect = 3.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 291 KQVDKNFLKAEKQRLRAEKKQRKAEVKELKKQLK 324
K+V K K EK+ ++ E+K+ K E+K+L K K
Sbjct: 707 KEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAK 740
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 53.1 bits (126), Expect = 1e-06
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 676 MTFALPEGPL--------GNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSA 727
M P+ PL G E+EE EEE +EEE+EE+EEEE+E ++E + + A
Sbjct: 713 MLLTTPQVPLAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEA 772
Query: 728 SSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAGER--LPG 785
++ + L E S SS S+ +R EG P + E+ R +
Sbjct: 773 AA---AVALGEVLGPR-----SGSSSEGSERSTDRSQEGAPSTLLADDQKESRGRASMAD 824
Query: 786 GENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGVDLPVTIPEV 845
G+ +P+E S + +L + ++ P+ E+ P ++ H + + E
Sbjct: 825 GDLEPEEGSKTLVLVSPGDMKKSPVTAELAPDPDLGTLAALTPQHERPQPTGSQLDVSEP 884
Query: 846 SSVPDQIRGEPR 857
++ ++ EP+
Sbjct: 885 GTLSSVLKSEPK 896
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 51.6 bits (122), Expect = 3e-06
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 604 LGQIEEEN---EGAGFKALPD-SMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTL 659
LGQI EE E G A P +V + ++A A+ EE E+ L E V+ +T
Sbjct: 171 LGQIAEETLVEEDLGQAAKPGPGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVE-VTT 229
Query: 660 DAAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKD 719
+ + D P + + + +G L +E+E+ EEE E+EE+EE+EEEE+E ++
Sbjct: 230 ERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEE 289
Query: 720 EVQSQSSASSED 731
E + + E+
Sbjct: 290 EEEEEEEEEEEE 301
>gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo
sapiens]
Length = 1544
Score = 47.8 bits (112), Expect = 5e-05
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 28/185 (15%)
Query: 568 INIVQELERVPHNTPVDVTPCMSPLPHDSPLIEKPGLGQIEEENEGAGFKALP-DSMVSV 626
I EL++ H + +SP P DS + + GL NEG LP +SM SV
Sbjct: 615 IGRAMELQKARHPKHLSTPSSVSPEPQDSAKLRQSGLA-----NEGTDAGYLPANSMSSV 669
Query: 627 KRKAENIASVEEAEEDLSGTQFVCETVIRSLTLDAAPDHNPPCRQKSLQMTFALPEGPLG 686
A S E +E+ +G++ V ET TLD P ++L F P PL
Sbjct: 670 ASGAS--FSQEGGKENDTGSKQVGETSAPGDTLDGTP--------RTLNTVFDFPPPPLD 719
Query: 687 NEKE---EIIHIAEE---------EAVMEEEEDEEDEEEEDELKDEVQSQSSASSEDYII 734
+E E+ + E ++V E EDE+ E++L+ + + S + ++
Sbjct: 720 QVQEEECEVERVTEHGTPKPFRKFDSVAFGESQSEDEQFENDLETDPPNWQQLVSREVLL 779
Query: 735 ILPEC 739
L C
Sbjct: 780 GLKPC 784
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 47.4 bits (111), Expect = 7e-05
Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 34/306 (11%)
Query: 534 IPQKAKNVASEREL--YIPSVDLLTAQDLLSFELLDINIVQELERV-PHNTPVDVTPCMS 590
+P+K + +A+ + ++P + + + L+ F L+ + +++++ R+ P + PC+
Sbjct: 1797 LPEKQEQLAAIYAVLEHLPEANHNSLERLI-FHLVKVALLEDVNRMSPGALAIIFAPCLL 1855
Query: 591 PLPHDS-PLIEKPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFV 649
P +S PL + +I E + + M K K E I+ +E AE
Sbjct: 1856 RCPDNSDPLTSMKDVLKITTCVE----MLIKEQMRKYKVKMEEISQLEAAES-------- 1903
Query: 650 CETVIRSLTLDAAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEE--AVMEEEED 707
R L+L N P L++ F+ P + N+ + I EEE ++EEE
Sbjct: 1904 --IAFRRLSLLR---QNAPW---PLKLGFSSPYEGVLNKSPKTRDIQEEELEVLLEEEAA 1955
Query: 708 EEDEEEEDELKDEVQSQSSASSEDYIIILPE-----CFDTSRPLGDSMYSSALSQPGLER 762
DE+ E E+ E ED LPE + + S + +L + R
Sbjct: 1956 GGDEDREKEILIERIQSIKEEKEDITYRLPELDPRGSDEENLDSETSASTESLLEERAGR 2015
Query: 763 GA-EGKPGVEAGQEPAEAGERLPGGENQPQEHSISDILTTSQTLETVPLIPEV-VELPPS 820
GA EG P A LP P+ S + +T P++P ++LPP
Sbjct: 2016 GASEGPPAPALPCPGAPTPSPLPTVAAPPRRRPSSFVTVRVKTPRRTPIMPTANIKLPPG 2075
Query: 821 LPRSSP 826
LP P
Sbjct: 2076 LPSHLP 2081
>gi|4502805 chromogranin A precursor [Homo sapiens]
Length = 457
Score = 45.8 bits (107), Expect = 2e-04
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 37/204 (18%)
Query: 595 DSPLIEKPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVI 654
DS EK G E +GA +ALP+ M K + N A EE EE+
Sbjct: 135 DSKEAEKSG-----EATDGARPQALPEPMQESKAEGNNQAPGEEEEEE------------ 177
Query: 655 RSLTLDAAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIH----IAEEEAVMEEEEDEED 710
+ A + +PP S + EG + ++ ++ E + E+EE+
Sbjct: 178 -----EEATNTHPPASLPSQKYPGPQAEGDSEGLSQGLVDREKGLSAEPGWQAKREEEEE 232
Query: 711 EEEEDELKDEVQSQSSASSEDYIIILPECFDTSRPL--GDSMYSSALSQPGLERGAEGKP 768
EEEE E +E + + +++ P + + G+S S AL+ G GKP
Sbjct: 233 EEEEAEAGEEAVPEEEGPT---VVLNPHPSLGYKEIRKGESR-SEALAVDG-----AGKP 283
Query: 769 GVEAGQEPAEAGERLPGGENQPQE 792
G E Q+P GE+ + + +E
Sbjct: 284 GAEEAQDPEGKGEQEHSQQKEEEE 307
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 44.3 bits (103), Expect = 6e-04
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 600 EKPGLGQIEEENEGAGFKA-LPDSMVSVKRKAENIASVEEAEE--DLSGTQFVCETVI-- 654
EKP ++++ + G K + S S+ SVEE EE D F+ E V+
Sbjct: 796 EKPSQKRVKKLRKKQGSKEDMTRSEESISSGTSTARSVEEVEEENDQEMESFITEEVLGQ 855
Query: 655 -RSLTLDAAPDHNPPCRQKSLQMTFALPEGPLGNE-KEEIIHIAEEEAVMEEEEDEEDEE 712
+ L A D + + L+ EG L EE + E+ EEEDE++EE
Sbjct: 856 QKKSPLHAKMDESKEGSIQGLEEMQVEREGSLNPSLNEENVKGQGEKKEESEEEDEKEEE 915
Query: 713 EEDELKDEVQSQSSASSEDYIIILPECFDTSRPLGDSMY 751
EE+E +E + + A E + + E D L + Y
Sbjct: 916 EEEEKLEEEKEEKEAQEEQESLSVGEEEDKEEGLEEIYY 954
Score = 30.8 bits (68), Expect = 6.4
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 682 EGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSEDYIIILP 737
E L EKEE E+E++ EE++++E E+ ++++S + +S Y + +P
Sbjct: 918 EEKLEEEKEEKEAQEEQESLSVGEEEDKEEGLEEIYYEDMESFTISSGNTYFVFVP 973
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 43.1 bits (100), Expect = 0.001
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSEDYIIILPECFDTSRPLG 747
E EE+ EEE EEEE+EE+EEEE+E + + + Q ++ +DT
Sbjct: 221 EDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND---------YDTRSEAS 271
Query: 748 DSMYSSALSQPGLERGAEGKPG 769
DS S G R G G
Sbjct: 272 DSGSESVSFTDGSVRSGSGTDG 293
Score = 36.2 bits (82), Expect = 0.15
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
E EE+ AEE+ ++E+ +EE+EEEE+E ++E + + ++
Sbjct: 211 EDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDE 254
Score = 34.3 bits (77), Expect = 0.58
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 687 NEKEEIIHIAEEEAVMEE--EEDE---EDEEEEDELKDEVQSQSSASSEDY 732
NE+E + EE+ +EE EEDE ED EEE+E ++E + + E+Y
Sbjct: 200 NEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEY 250
Score = 33.9 bits (76), Expect = 0.75
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 686 GNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSAS 728
G E+EE EEE EEEE E+DE ++ E ++ ++S AS
Sbjct: 229 GEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEAS 271
Score = 30.4 bits (67), Expect = 8.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 683 GPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
G G+ E+ + EE +EE+ +E++E EED +DE + E+
Sbjct: 186 GSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEE 234
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 43.1 bits (100), Expect = 0.001
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSEDYIIILPECFDTSRPLG 747
E EE+ EEE EEEE+EE+EEEE+E + + + Q ++ +DT
Sbjct: 221 EDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND---------YDTRSEAS 271
Query: 748 DSMYSSALSQPGLERGAEGKPG 769
DS S G R G G
Sbjct: 272 DSGSESVSFTDGSVRSGSGTDG 293
Score = 36.2 bits (82), Expect = 0.15
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
E EE+ AEE+ ++E+ +EE+EEEE+E ++E + + ++
Sbjct: 211 EDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDE 254
Score = 34.3 bits (77), Expect = 0.58
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 687 NEKEEIIHIAEEEAVMEE--EEDE---EDEEEEDELKDEVQSQSSASSEDY 732
NE+E + EE+ +EE EEDE ED EEE+E ++E + + E+Y
Sbjct: 200 NEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEY 250
Score = 33.9 bits (76), Expect = 0.75
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 686 GNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSAS 728
G E+EE EEE EEEE E+DE ++ E ++ ++S AS
Sbjct: 229 GEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEAS 271
Score = 30.4 bits (67), Expect = 8.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 683 GPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
G G+ E+ + EE +EE+ +E++E EED +DE + E+
Sbjct: 186 GSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEE 234
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 42.7 bits (99), Expect = 0.002
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 623 MVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLDAAPDHNPPCRQKSLQMTFALPE 682
++S +E E+ E L E + + A P + +S PE
Sbjct: 991 LISNAAVSEEEREAEKEAERLMEQASCWEKEEQEILSTRANSRQSPAKVQSKNKYLHSPE 1050
Query: 683 G-PLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
P+ E+ +++ +++E + EEEE++E+EEEE+E ++E + + E+
Sbjct: 1051 SRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEE 1100
Score = 40.8 bits (94), Expect = 0.006
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSS 726
E+EE EEE EEEEDEE+EEEE+E ++E QSS
Sbjct: 1071 EEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSS 1109
Score = 39.3 bits (90), Expect = 0.018
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 665 HNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQ 724
H+P R + + L +E+EE EEE EEEE+EEDEEEE+E ++E + +
Sbjct: 1047 HSPESRPVTGERGQLLELSKESSEEEEEEEDEEEEE--EEEEEEEDEEEEEEEEEEEEEE 1104
Query: 725 SSASS 729
+ SS
Sbjct: 1105 NIQSS 1109
Score = 33.1 bits (74), Expect = 1.3
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 681 PEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDE 716
P G + E+ + EEE EEEE+EE+EEEE E
Sbjct: 1335 PNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGE 1370
Score = 32.0 bits (71), Expect = 2.9
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDE 720
EK E I EE EEEE+EE+EEEE+ ++E
Sbjct: 1341 EKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEE 1373
Score = 30.8 bits (68), Expect = 6.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 703 EEEEDEEDEEEEDELKDEVQSQSSASS 729
EEEE+EE+EEEE+E ++E + + +
Sbjct: 1351 EEEEEEEEEEEEEEEEEEGEEEEGGGN 1377
>gi|41406057 amyloid beta A4 protein isoform c precursor [Homo
sapiens]
Length = 695
Score = 42.4 bits (98), Expect = 0.002
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 689 KEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
+++++ +AEEE V E EE+E D++E+DE DEV+ ++ E+
Sbjct: 222 EDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEE 264
Score = 33.9 bits (76), Expect = 0.75
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSE 730
E+EE+ + EEEA +D+ED+E+ DE+++E + ++E
Sbjct: 230 EEEEVAEVEEEEA-----DDDEDDEDGDEVEEEAEEPYEEATE 267
>gi|41406055 amyloid beta A4 protein isoform b precursor [Homo
sapiens]
Length = 751
Score = 42.4 bits (98), Expect = 0.002
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 689 KEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
+++++ +AEEE V E EE+E D++E+DE DEV+ ++ E+
Sbjct: 222 EDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEE 264
Score = 33.9 bits (76), Expect = 0.75
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSE 730
E+EE+ + EEEA +D+ED+E+ DE+++E + ++E
Sbjct: 230 EEEEVAEVEEEEA-----DDDEDDEDGDEVEEEAEEPYEEATE 267
>gi|4502167 amyloid beta A4 protein isoform a precursor [Homo
sapiens]
Length = 770
Score = 42.4 bits (98), Expect = 0.002
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 689 KEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
+++++ +AEEE V E EE+E D++E+DE DEV+ ++ E+
Sbjct: 222 EDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEE 264
Score = 33.9 bits (76), Expect = 0.75
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSE 730
E+EE+ + EEEA +D+ED+E+ DE+++E + ++E
Sbjct: 230 EEEEVAEVEEEEA-----DDDEDDEDGDEVEEEAEEPYEEATE 267
>gi|209915570 amyloid beta A4 protein isoform e precursor [Homo
sapiens]
Length = 639
Score = 42.4 bits (98), Expect = 0.002
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 689 KEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
+++++ +AEEE V E EE+E D++E+DE DEV+ ++ E+
Sbjct: 166 EDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEE 208
Score = 33.9 bits (76), Expect = 0.75
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSE 730
E+EE+ + EEEA +D+ED+E+ DE+++E + ++E
Sbjct: 174 EEEEVAEVEEEEA-----DDDEDDEDGDEVEEEAEEPYEEATE 211
>gi|209915573 amyloid beta A4 protein isoform f precursor [Homo
sapiens]
Length = 714
Score = 42.4 bits (98), Expect = 0.002
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 689 KEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
+++++ +AEEE V E EE+E D++E+DE DEV+ ++ E+
Sbjct: 166 EDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEE 208
Score = 33.9 bits (76), Expect = 0.75
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 688 EKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSE 730
E+EE+ + EEEA +D+ED+E+ DE+++E + ++E
Sbjct: 174 EEEEVAEVEEEEA-----DDDEDDEDGDEVEEEAEEPYEEATE 211
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 41.2 bits (95), Expect = 0.005
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Query: 684 PLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSED 731
PL +E+EE EEE V+ EEE+EE+EE ++E ++EV++ ED
Sbjct: 4 PLRDEEEE-----EEEMVVSEEEEEEEEEGDEEEEEEVEAADEDDEED 46
Score = 36.6 bits (83), Expect = 0.12
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 30/146 (20%)
Query: 656 SLTLDAAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIH--IAEEEAVMEEEEDEEDEEE 713
S T A N PC K P P +EK E I + +EEA +EE+ E++
Sbjct: 1597 SPTTPEASATNSPCTSK--------PATPAPSEKGEGIRTPLEKEEAENQEEKPEKNSRI 1648
Query: 714 EDELKDEVQSQSSASSEDYIIILPECFDTSR-PLGDSMYSSALSQPGLERGAEGKPGVEA 772
++++ E + S A S L E + + PL D + PG+ E +PG
Sbjct: 1649 GEKMETEADAPSPAPS------LGERLEPRKIPLEDEV-------PGVPGEMEPEPGYRG 1695
Query: 773 GQEPAEAGERLPG--GENQP---QEH 793
+E + A E PG GE +P QEH
Sbjct: 1696 DREKS-ATESTPGERGEEKPLDGQEH 1720
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 40.8 bits (94), Expect = 0.006
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 43/203 (21%)
Query: 620 PDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLDAAPDHNPPCRQKSLQMTF- 678
P + +VKRK EN +A+E + + + + PDH+ + LQ F
Sbjct: 393 PMDLSTVKRKMEN-RDYRDAQEFAADVRLMFSNCYKY----NPPDHDVVAMARKLQDVFE 447
Query: 679 --------------------ALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELK 718
A+P G + E + E+ EEEE+E++E+EE+E
Sbjct: 448 FRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEE-- 505
Query: 719 DEVQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGL----------ERGAEGKP 768
+S+SS S E+ L E + R + + + +ALSQ + E+ + K
Sbjct: 506 ---ESESSDSEEERAHRLAELQEQLRAVHEQL--AALSQGPISKPKRKREKKEKKKKRKA 560
Query: 769 GVEAGQEPAEAGERLPGGENQPQ 791
G+ A+ ++ P PQ
Sbjct: 561 EKHRGRAGADEDDKGPRAPRPPQ 583
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 40.8 bits (94), Expect = 0.006
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 43/203 (21%)
Query: 620 PDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTLDAAPDHNPPCRQKSLQMTF- 678
P + +VKRK EN +A+E + + + + PDH+ + LQ F
Sbjct: 393 PMDLSTVKRKMEN-RDYRDAQEFAADVRLMFSNCYKY----NPPDHDVVAMARKLQDVFE 447
Query: 679 --------------------ALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELK 718
A+P G + E + E+ EEEE+E++E+EE+E
Sbjct: 448 FRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEE-- 505
Query: 719 DEVQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGL----------ERGAEGKP 768
+S+SS S E+ L E + R + + + +ALSQ + E+ + K
Sbjct: 506 ---ESESSDSEEERAHRLAELQEQLRAVHEQL--AALSQGPISKPKRKREKKEKKKKRKA 560
Query: 769 GVEAGQEPAEAGERLPGGENQPQ 791
G+ A+ ++ P PQ
Sbjct: 561 EKHRGRAGADEDDKGPRAPRPPQ 583
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 40.4 bits (93), Expect = 0.008
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 686 GNEKEEIIHIAEE-EAVMEEEEDEEDEEEEDELKDEVQSQSSASSEDYIIILPECFDTSR 744
G E++E ++EE E+ EEEE EE+EEEED+ D+ + + ++D L E + +
Sbjct: 1032 GGEEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEA--SEK 1089
Query: 745 PLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAGERLPGGENQP 790
GDS +S K + E +E+ E E+ P
Sbjct: 1090 DEGDSDEEETVSI------VTSKAEATSSSESSESSEFESSSESSP 1129
Score = 37.0 bits (84), Expect = 0.089
Identities = 62/275 (22%), Positives = 98/275 (35%), Gaps = 28/275 (10%)
Query: 600 EKPGLGQIEEENEGAGFKALPDSMVSVKRKAENIASVEEAEEDLSGTQFVCETVIRSLTL 659
E L + E++EG + S+V+ K +A + + E+ E
Sbjct: 1079 EDTALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSE-----------------F 1121
Query: 660 DAAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKD 719
+++ + +P + ++ E E+EE +AEE ED E + EE L
Sbjct: 1122 ESSSESSPSSSEDEEEVVAREEE----EEEEEEEMVAEESMASAGPEDFEQDGEEAALAP 1177
Query: 720 EVQSQSSASSEDYIIILPECF-DTSRP--LGDSMYSSALSQPGLERGAEGKPGVEAGQEP 776
+ S E+ + I E RP L + + +P R +PG+ QE
Sbjct: 1178 GAPAVDSLGMEEEVDIETEAVAPEERPSMLDEPPLPVGVEEPADSREPPEEPGL--SQEG 1235
Query: 777 AEAGERLPGGENQPQEHSISDILTTSQTLETVPLIPEVVELPPSLPRSSPCVHHHGSPGV 836
A P + +S LE P P ++ LP P P SP
Sbjct: 1236 AMLLSPEPPAKEVEARPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPPPRPPRPPSPPP 1295
Query: 837 DLPVTIPEVSSVPDQIRGE--PRGSSGLVNSRQKS 869
+ T SVP + E P + GL S KS
Sbjct: 1296 EPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKS 1330
Score = 30.4 bits (67), Expect = 8.3
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 10/144 (6%)
Query: 685 LGNEKEEIIHIAEEEAVMEEEEDEE---DEEEEDELKDEVQSQSSASSEDYIIILPE--- 738
L E+E E E EEE+D++ D+ +E E DE + S AS +D E
Sbjct: 1041 LSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETV 1100
Query: 739 CFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAGERLPGGENQPQEHSISDI 798
TS+ S S+ S E +E P +E A E E + +E +++
Sbjct: 1101 SIVTSKAEATSSSESSESSE-FESSSESSPSSSEDEEEVVAREE---EEEEEEEEMVAEE 1156
Query: 799 LTTSQTLETVPLIPEVVELPPSLP 822
S E E L P P
Sbjct: 1157 SMASAGPEDFEQDGEEAALAPGAP 1180
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 40.0 bits (92), Expect = 0.011
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 691 EIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSEDYIIILPECFDTSRPLGDSM 750
E+ I EE+ EEEE+EE+EEEE+E+ EV S S+ + E D +RP S
Sbjct: 346 ELSRIEEEKEDEEEEEEEEEEEEEEEV-TEVLLDSCVVSQVGVGQSEE--DGTRPQSTS- 401
Query: 751 YSSALSQPGLE--RGAEGKPGVEAGQEPAEAGERLPGGENQPQEHSISDILTTSQTLETV 808
+ G E + AE K EA + E E+ P + +E ++ S +
Sbjct: 402 DQKLWEEVGEEAKKEAEEKAKEEAEEVAEEEAEKEPQDWAETKEEPEAEAEAASSGVPAT 461
Query: 809 PLIPEVVELPPSLPRSSPCVHHHGSPGVDLPVTIPEVSS---VPDQIRGEPR 857
PE V++ + S P + P LP P S VP G R
Sbjct: 462 KQHPE-VQVEDTDADSCPLMAEENPPSTVLPPPSPAKSDTLIVPSSASGTHR 512
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 40.0 bits (92), Expect = 0.011
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 682 EGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSE 730
E G+E+EE EEE EE EE+EEEE+E ++E S S +SE
Sbjct: 273 ESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASE 321
Score = 37.4 bits (85), Expect = 0.068
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 670 RQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASS 729
R+ S + + G E+EE EEE EE +EE+EEEE+E ++ + AS
Sbjct: 262 RKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASE 321
Query: 730 EDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAGERLPGGENQ 789
+ + E + + + + +R + E EA E + GE
Sbjct: 322 QSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS---------GESEEAEEEV--GEGT 370
Query: 790 PQEHSIS--DILTTSQTLETVPLIPEVVELPPSLPRSSPC 827
PQ +++ D + S L + L ELP LP C
Sbjct: 371 PQSSALTEGDYVPDSPALLPIEL---KQELPKYLPALQGC 407
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 40.0 bits (92), Expect = 0.011
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 682 EGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASSE 730
E G+E+EE EEE EE EE+EEEE+E ++E S S +SE
Sbjct: 283 ESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASE 331
Score = 37.4 bits (85), Expect = 0.068
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 670 RQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDEEEEDELKDEVQSQSSASS 729
R+ S + + G E+EE EEE EE +EE+EEEE+E ++ + AS
Sbjct: 272 RKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASE 331
Query: 730 EDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAGQEPAEAGERLPGGENQ 789
+ + E + + + + +R + E EA E + GE
Sbjct: 332 QSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS---------GESEEAEEEV--GEGT 380
Query: 790 PQEHSIS--DILTTSQTLETVPLIPEVVELPPSLPRSSPC 827
PQ +++ D + S L + L ELP LP C
Sbjct: 381 PQSSALTEGDYVPDSPALLPIEL---KQELPKYLPALQGC 417
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 40.0 bits (92), Expect = 0.011
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 707 DEEDEEEEDELKDEVQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEG 766
+EE+EE+ D+L + + + S++SE+ ++ +PE +T L +SQ G +E
Sbjct: 1458 EEEEEEDFDDLTQDEEDEMSSASEESVLSVPELQETMEKLTWLASERRMSQEG---ESEE 1514
Query: 767 KPGVEAGQEPAEAGERLPGG------ENQPQEHSISDILTTSQTLETVPLIPEV 814
+ E EP E E G E++ + ++ D T + PEV
Sbjct: 1515 ENSQEENSEPEEEEEEEAEGMESLQKEDEMTDEAVGDSAEKPPTFASPETAPEV 1568
Score = 32.3 bits (72), Expect = 2.2
Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 21/123 (17%)
Query: 660 DAAPDHNPPCRQKSLQMTFALPEGPLGNEKEEIIHIAEEEAVMEEEEDEEDE------EE 713
D D S + ++PE L E++ +A E + +E E EE+ E
Sbjct: 1467 DLTQDEEDEMSSASEESVLSVPE--LQETMEKLTWLASERRMSQEGESEEENSQEENSEP 1524
Query: 714 EDELKDEVQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGKPGVEAG 773
E+E ++E + S ED + T +GDS +P E P VE
Sbjct: 1525 EEEEEEEAEGMESLQKEDEM--------TDEAVGDS-----AEKPPTFASPETAPEVETS 1571
Query: 774 QEP 776
+ P
Sbjct: 1572 RTP 1574
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,305,437
Number of Sequences: 37866
Number of extensions: 2160223
Number of successful extensions: 23867
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 273
Number of HSP's that attempted gapping in prelim test: 14763
Number of HSP's gapped (non-prelim): 4528
length of query: 966
length of database: 18,247,518
effective HSP length: 112
effective length of query: 854
effective length of database: 14,006,526
effective search space: 11961573204
effective search space used: 11961573204
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.