Guide to the Human Genome
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Name: USP37 Sequence: fasta or formatted (979aa) NCBI GI: 188497648
Description:

ubiquitin specific peptidase 37

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         49           2
 C cysteine            1.6         16           1
 D aspartate           5.8         57           3
 E glutamate           8.7         85           3
 F phenylalanine       3.4         33           2
 G glycine             4.8         47           2
 H histidine           1.8         18           1
 I isoleucine          4.8         47           2
 K lysine              7.8         76           2
 L leucine             9.9         97           2
 M methionine          1.9         19           1
 N asparagine          4.9         48           2
 P proline             4.9         48           2
 Q glutamine           5.4         53           4
 R arginine            5.3         52           2
 S serine             12.0        117           3
 T threonine           5.5         54           2
 V valine              3.6         35           2
 W tryptophan          0.8          8           1
 Y tyrosine            2.0         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin specific peptidase 37 
USP29                 0.350   ubiquitin specific peptidase 29 
USP26                 0.312   ubiquitin-specific protease 26 
USP12                 0.035   ubiquitin thiolesterase 12 
USP46                 0.033   ubiquitin specific peptidase 46 isoform 2 
USP46                 0.033   ubiquitin specific peptidase 46 isoform 1 
USP2                  0.032   ubiquitin specific peptidase 2 isoform a 
USP2                  0.032   ubiquitin specific peptidase 2 isoform b 
USP3                  0.029   ubiquitin thiolesterase 3 
USP21                 0.027   ubiquitin-specific protease 21 
USP21                 0.027   ubiquitin-specific protease 21 
USP8                  0.026   ubiquitin specific peptidase 8 
USP8                  0.026   ubiquitin specific peptidase 8 
USP8                  0.026   ubiquitin specific peptidase 8 
USP19                 0.026   ubiquitin thioesterase 19 
USP22                 0.024   ubiquitin thiolesterase 22 
USP50                 0.023   ubiquitin specific protease 50 
USP4                  0.021   ubiquitin specific protease 4 isoform a 
USP4                  0.021   ubiquitin specific protease 4 isoform b 
USP15                 0.021   ubiquitin specific peptidase 15 
USP27X                0.021   X-linked ubiquitin thioesterase 27 
USP24                 0.020   ubiquitin specific protease 24 
USP32                 0.019   ubiquitin specific protease 32 
USP6                  0.019   ubiquitin specific protease 6 
USP51                 0.019   ubiquitin specific protease 51 
USP25                 0.018   ubiquitin specific peptidase 25 
USP11                 0.018   ubiquitin specific peptidase 11 
USP49                 0.018   ubiquitin thioesterase 49 
USP16                 0.017   ubiquitin specific protease 16 isoform b 
USP16                 0.017   ubiquitin specific protease 16 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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