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Search of human proteins with 13929462
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase
1, membrane-bound form [Homo sapiens]
(398 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... 816 0.0
gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2... 401 e-112
gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ... 401 e-112
gi|4502349 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ... 329 2e-90
gi|47078258 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4... 280 2e-75
gi|9994175 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ... 280 2e-75
gi|4757828 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ... 239 3e-63
gi|190570165 beta-1,4-galactosyltransferase 6 [Homo sapiens] 226 3e-59
gi|6005952 xylosylprotein beta 1,4-galactosyltransferase 7 [Homo... 129 6e-30
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s... 39 0.008
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 38 0.014
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 37 0.031
gi|4758416 golgi-specific brefeldin A resistant guanine nucleoti... 37 0.041
gi|154816184 transmembrane protein 55B isoform 2 [Homo sapiens] 37 0.041
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 37 0.041
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 37 0.041
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 36 0.070
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 36 0.070
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 36 0.070
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 36 0.070
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 35 0.091
gi|189181750 human immunodeficiency virus type I enhancer bindin... 35 0.091
gi|116089331 human immunodeficiency virus type I enhancer bindin... 35 0.091
gi|39812378 RAN binding protein 9 [Homo sapiens] 35 0.16
gi|25952087 potassium voltage-gated channel, shaker-related subf... 35 0.16
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 35 0.16
gi|167736355 mucin 4 isoform a [Homo sapiens] 34 0.20
gi|154146199 sal-like 3 [Homo sapiens] 34 0.20
gi|7661886 DAZ associated protein 2 isoform a [Homo sapiens] 34 0.20
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 34 0.20
>gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1,
membrane-bound form [Homo sapiens]
Length = 398
Score = 816 bits (2107), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MRLREPLLSGSAAMPGASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVSTPL 60
MRLREPLLSGSAAMPGASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVSTPL
Sbjct: 1 MRLREPLLSGSAAMPGASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVSTPL 60
Query: 61 QGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVP 120
QGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVP
Sbjct: 61 QGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVP 120
Query: 121 HTTALSLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAI 180
HTTALSLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAI
Sbjct: 121 HTTALSLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAI 180
Query: 181 IIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYD 240
IIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYD
Sbjct: 181 IIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYD 240
Query: 241 YTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTI 300
YTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTI
Sbjct: 241 YTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTI 300
Query: 301 NGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIA 360
NGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIA
Sbjct: 301 NGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIA 360
Query: 361 HTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
HTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS
Sbjct: 361 HTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGTPS 398
>gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 401 bits (1030), Expect = e-112
Identities = 206/383 (53%), Positives = 249/383 (65%), Gaps = 24/383 (6%)
Query: 16 GASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSG 75
G +L+R C+ ++ +C LH V ++ Y L S G A SS
Sbjct: 6 GGTLERVCKAVLLLCLLHFLVAVILYFD----VYAQHLAFFSRFSARGPAHALHPAASSS 61
Query: 76 ELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACPEESP 135
+ +RP +S P V + PGP TA +LP CP+ P
Sbjct: 62 SSSSNCSRPNATASSSGLPE-------VPSALPGP------------TAPTLPPCPDSPP 102
Query: 136 LLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWL 195
LVG +LIEF P+ LE V ++NP V MGGRY P DC VA+IIPFR+R+ HL+YWL
Sbjct: 103 GLVGRLLIEFTSPMPLERVQRENPGVLMGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWL 162
Query: 196 YYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALK-DYDYTCFVFSDVDLIPM 254
+YLHP+L+RQ+L YG+YVINQ G+ FNRAKLLNVGF EALK D Y CF+FSDVDL+PM
Sbjct: 163 HYLHPILRRQRLRYGVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPM 222
Query: 255 NDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGED 314
+D N YRC QPRH ++AMDKFGF LPY YFGGVS LSK QFL INGFPN YWGWGGED
Sbjct: 223 DDRNLYRCGDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGED 282
Query: 315 DDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 374
DDIFNR+ GM ISRP+ +GR RMI+H RDK NEPNPQRF +I +TK TM DG+ S+
Sbjct: 283 DDIFNRISLTGMKISRPDIRIGRYRMIKHDRDKHNEPNPQRFTKIQNTKLTMKRDGIGSV 342
Query: 375 TYQVLDVQRYPLYTQITVDIGTP 397
YQVL+V R PL+T ITVDIG P
Sbjct: 343 RYQVLEVSRQPLFTNITVDIGRP 365
>gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 401 bits (1030), Expect = e-112
Identities = 206/383 (53%), Positives = 249/383 (65%), Gaps = 24/383 (6%)
Query: 16 GASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSG 75
G +L+R C+ ++ +C LH V ++ Y L S G A SS
Sbjct: 6 GGTLERVCKAVLLLCLLHFLVAVILYFD----VYAQHLAFFSRFSARGPAHALHPAASSS 61
Query: 76 ELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACPEESP 135
+ +RP +S P V + PGP TA +LP CP+ P
Sbjct: 62 SSSSNCSRPNATASSSGLPE-------VPSALPGP------------TAPTLPPCPDSPP 102
Query: 136 LLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWL 195
LVG +LIEF P+ LE V ++NP V MGGRY P DC VA+IIPFR+R+ HL+YWL
Sbjct: 103 GLVGRLLIEFTSPMPLERVQRENPGVLMGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWL 162
Query: 196 YYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALK-DYDYTCFVFSDVDLIPM 254
+YLHP+L+RQ+L YG+YVINQ G+ FNRAKLLNVGF EALK D Y CF+FSDVDL+PM
Sbjct: 163 HYLHPILRRQRLRYGVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPM 222
Query: 255 NDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGED 314
+D N YRC QPRH ++AMDKFGF LPY YFGGVS LSK QFL INGFPN YWGWGGED
Sbjct: 223 DDRNLYRCGDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGED 282
Query: 315 DDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 374
DDIFNR+ GM ISRP+ +GR RMI+H RDK NEPNPQRF +I +TK TM DG+ S+
Sbjct: 283 DDIFNRISLTGMKISRPDIRIGRYRMIKHDRDKHNEPNPQRFTKIQNTKLTMKRDGIGSV 342
Query: 375 TYQVLDVQRYPLYTQITVDIGTP 397
YQVL+V R PL+T ITVDIG P
Sbjct: 343 RYQVLEVSRQPLFTNITVDIGRP 365
>gi|4502349 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3
[Homo sapiens]
Length = 393
Score = 329 bits (844), Expect = 2e-90
Identities = 166/306 (54%), Positives = 204/306 (66%), Gaps = 6/306 (1%)
Query: 97 GGDSSPVVD-SGPGPA----SNLTSVPVPHTTALSLPACPEESPLLVGPMLIEFNMPVDL 151
G D P D S P S+L P LP CPE SPLLVGP+ + F+ L
Sbjct: 39 GRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPLLVGPVSVSFSPVPSL 98
Query: 152 ELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGI 211
+ ++NP V+ GGRY P C + AII+P R R+ HL+ LY+LHP LQRQQL YGI
Sbjct: 99 AEIVERNPRVEPGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGI 158
Query: 212 YVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQ-PRHIS 270
YVI+QAG+ FNRAKLLNVG +EAL+D ++ C DVDL+P NDHN Y C + PRH++
Sbjct: 159 YVIHQAGNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVA 218
Query: 271 VAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISR 330
VAM+KFG+SLPY QYFGGVSAL+ Q+L +NGFPN YWGWGGEDDDI R+ GM ISR
Sbjct: 219 VAMNKFGYSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAGMKISR 278
Query: 331 PNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQI 390
P VG +M++H DK NE NP RFD + T+ + DG+NSLTYQ+L + PLYT I
Sbjct: 279 PPTSVGHYKMVKHRGDKGNEENPHRFDLLVRTQNSWTQDGMNSLTYQLLARELGPLYTNI 338
Query: 391 TVDIGT 396
T DIGT
Sbjct: 339 TADIGT 344
>gi|47078258 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4
[Homo sapiens]
Length = 344
Score = 280 bits (716), Expect = 2e-75
Identities = 137/272 (50%), Positives = 181/272 (66%), Gaps = 1/272 (0%)
Query: 122 TTALSLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAII 181
T + L CP SP L G + F + LE V +NP V G RY P++C + +VAI+
Sbjct: 69 TKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRG-RYRPQECKALQRVAIL 127
Query: 182 IPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDY 241
+P RNR++HL Y L +LHP LQRQQLDYGIYVI+QA FNRAKLLNVG+ EALK+ ++
Sbjct: 128 VPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLEALKEENW 187
Query: 242 TCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTIN 301
CF+F DVDL+P ND N Y+C P+H+ V + G+ L Y YFGGV+ALS++QF +N
Sbjct: 188 DCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSREQFFKVN 247
Query: 302 GFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAH 361
GF NNYWGWGGEDDD+ R+ + M ISRP VG+ M+ H+RDK NE N +R +
Sbjct: 248 GFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAERMKLLHQ 307
Query: 362 TKETMLSDGLNSLTYQVLDVQRYPLYTQITVD 393
+DGL+S +Y+++ V+ PLY ITVD
Sbjct: 308 VSRVWRTDGLSSCSYKLVSVEHNPLYINITVD 339
>gi|9994175 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4
[Homo sapiens]
Length = 344
Score = 280 bits (716), Expect = 2e-75
Identities = 137/272 (50%), Positives = 181/272 (66%), Gaps = 1/272 (0%)
Query: 122 TTALSLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAII 181
T + L CP SP L G + F + LE V +NP V G RY P++C + +VAI+
Sbjct: 69 TKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRG-RYRPQECKALQRVAIL 127
Query: 182 IPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDY 241
+P RNR++HL Y L +LHP LQRQQLDYGIYVI+QA FNRAKLLNVG+ EALK+ ++
Sbjct: 128 VPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLEALKEENW 187
Query: 242 TCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTIN 301
CF+F DVDL+P ND N Y+C P+H+ V + G+ L Y YFGGV+ALS++QF +N
Sbjct: 188 DCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSREQFFKVN 247
Query: 302 GFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAH 361
GF NNYWGWGGEDDD+ R+ + M ISRP VG+ M+ H+RDK NE N +R +
Sbjct: 248 GFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAERMKLLHQ 307
Query: 362 TKETMLSDGLNSLTYQVLDVQRYPLYTQITVD 393
+DGL+S +Y+++ V+ PLY ITVD
Sbjct: 308 VSRVWRTDGLSSCSYKLVSVEHNPLYINITVD 339
>gi|4757828 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5
[Homo sapiens]
Length = 388
Score = 239 bits (610), Expect = 3e-63
Identities = 124/268 (46%), Positives = 166/268 (61%), Gaps = 6/268 (2%)
Query: 130 CPEESPLLVGPMLI---EFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRN 186
CPE P + GP+ I E M EL +K +P +K+GG + P DC+ KVAI+IPFRN
Sbjct: 114 CPERLPSMKGPIDINMSEIGMDYIHELFSK-DPTIKLGGHWKPSDCMPRWKVAILIPFRN 172
Query: 187 RQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVF 246
R EHL +L P+LQRQ+L + YV+ Q G FNRA L NVGFQEA+KD D+ C +F
Sbjct: 173 RHEHLPVLFRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIF 232
Query: 247 SDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNN 306
DVD IP +D N Y C PRH + +DK+ + LPY ++FGGVS L+ +QF INGFPN
Sbjct: 233 HDVDHIPESDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNA 292
Query: 307 YWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETM 366
+WGWGGEDDD++NR+ G S+SRP G+ + I H + R+ + +KE
Sbjct: 293 FWGWGGEDDDLWNRVQNAGYSVSRPEGDTGKYKSIPH-HHRGEVQFLGRYALLRKSKERQ 351
Query: 367 LSDGLNSLTYQVLDVQRYPLYTQITVDI 394
DGLN+L Y ++ LY ITV++
Sbjct: 352 GLDGLNNLNY-FANITYDALYKNITVNL 378
>gi|190570165 beta-1,4-galactosyltransferase 6 [Homo sapiens]
Length = 382
Score = 226 bits (576), Expect = 3e-59
Identities = 117/283 (41%), Positives = 178/283 (62%), Gaps = 7/283 (2%)
Query: 115 TSVPVPHTTALSLPACPEESPLLVGPMLIEFNMPV--DLELVAKQNPNVKMGGRYAPRDC 172
T +P T + LP CPE+ P + G + + + ++ + ++ +++ GG + P+DC
Sbjct: 94 TYLPENFTYSPYLP-CPEKLPYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDC 152
Query: 173 VSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGF 232
KVA++IPFRNR EHL + +L P+LQ+Q+L++ YVI Q G FNRA L NVGF
Sbjct: 153 KPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGF 212
Query: 233 QEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSAL 292
+EA+KD + C +F DVD +P ND N Y C PRH + +DK+ + LPY ++FGGVS L
Sbjct: 213 KEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGL 272
Query: 293 SKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPN 352
+ +QF INGFPN +WGWGGEDDD++NR+ + G +++RP +G+ + I H +
Sbjct: 273 TVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPH-HHRGEVQF 331
Query: 353 PQRFDRIAHTKETMLSDGLNSLTYQ-VLDVQRYPLYTQITVDI 394
R+ + ++KE DGLN+L Y+ + V R LYT I+V++
Sbjct: 332 LGRYKLLRYSKERQYIDGLNNLIYRPKILVDR--LYTNISVNL 372
>gi|6005952 xylosylprotein beta 1,4-galactosyltransferase 7 [Homo
sapiens]
Length = 327
Score = 129 bits (323), Expect = 6e-30
Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 9/208 (4%)
Query: 175 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQE 234
PH++A+++PFR R E L ++ ++ L R+++ + IYV+NQ FNRA L+NVGF E
Sbjct: 92 PHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLE 151
Query: 235 ALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSK 294
+ DY DVDL+P+N+ Y F + VA + Y Y GG+ LSK
Sbjct: 152 SSNSTDY--IAMHDVDLLPLNEELDYG-FPEAGPFHVASPELHPLYHYKTYVGGILLLSK 208
Query: 295 QQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQ 354
Q + NG N +WGWG EDD+ + R+ G+ + RP+ + + RH D Q
Sbjct: 209 QHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQ 268
Query: 355 RFDRIAHTKETML----SDGLNSLTYQV 378
+ RIA K+ GLN++ Y V
Sbjct: 269 K--RIAAQKQEQFKVDREGGLNTVKYHV 294
>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
sapiens]
Length = 412
Score = 38.9 bits (89), Expect = 0.008
Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 14/106 (13%)
Query: 81 GARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTS-VPVPHTTALSLPACPEESPLLVG 139
G PPP GA G + P S PGPA TS +P LS +E +
Sbjct: 236 GLAGPPPRGAQDPALGPGPAPPATQSSPGPAQGSTSGLPAHACAQLSPSPIKKEESGIPN 295
Query: 140 PMLIEFNMPVDL------ELVAKQNPNVK----MGGRYAPRDCVSP 175
P L +PV L E +A + P K MG PR C+ P
Sbjct: 296 PCLA---LPVGLALGPTREKLAPEEPPEKRAVLMGPMDPPRPCMPP 338
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 38.1 bits (87), Expect = 0.014
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 219 DTIFNRAKLLNVGFQEALKDYDYTCFVFSDVD-------LIPMNDHNAYRCFSQPRHISV 271
D +F L L Y +FS D +P ++H A+
Sbjct: 633 DLVFTTEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFT---------- 682
Query: 272 AMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRP 331
K GF + Y G++ + K + + GF + GWG ED D+FN++V G+ R
Sbjct: 683 --QKTGF---WRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRS 737
Query: 332 NAV 334
V
Sbjct: 738 QEV 740
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 37.0 bits (84), Expect = 0.031
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 285 YFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAV 334
Y G++ + K L GF + GWG ED D++N+++ G+ R V
Sbjct: 778 YGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQEV 827
>gi|4758416 golgi-specific brefeldin A resistant guanine nucleotide
exchange factor 1 [Homo sapiens]
Length = 1859
Score = 36.6 bits (83), Expect = 0.041
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 21/107 (19%)
Query: 66 SAAAIGQSSGELRTGGARPPPP----LGASSQPRP--------GGDSSPVVDS------- 106
++A + ++G+ RT G PPP LGA +P SPV S
Sbjct: 1737 ASAHLTSAAGDTRTPGHPPPPEIPSELGACDFEKPESPRAASSSSPGSPVASSPSRLSPT 1796
Query: 107 --GPGPASNLTSVPVPHTTALSLPACPEESPLLVGPMLIEFNMPVDL 151
GP P + + P + L + P P+++ P LIE PV L
Sbjct: 1797 PDGPPPLAQPPLILQPLASPLQVGVPPMTLPIILNPALIEATSPVPL 1843
>gi|154816184 transmembrane protein 55B isoform 2 [Homo sapiens]
Length = 277
Score = 36.6 bits (83), Expect = 0.041
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 56 VSTPLQGGSNSAAAIGQSSGELRTGGARPP--PPLGASSQPRPGGDSSPVVDSGPGPASN 113
+S P+ GG+ +G GG P PP GA+ P P G + + P P S
Sbjct: 11 LSEPIDGGAGGNGLVGPGGSGAGPGGGLTPSAPPYGAAFPPFPEGHPAVLPGEDPPPYSP 70
Query: 114 LTS 116
LTS
Sbjct: 71 LTS 73
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 36.6 bits (83), Expect = 0.041
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 78 RTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACPEESP 135
R G PPPP SS P + P+ D PGP T P LS PA P E P
Sbjct: 782 RRKGPPPPPPKRLSSVSGPSPEPPPL-DESPGPKEGATG---PRRRTLSEPAGPSEPP 835
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 36.6 bits (83), Expect = 0.041
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 78 RTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACPEESP 135
R G PPPP SS P + P+ D PGP T P LS PA P E P
Sbjct: 864 RRKGPPPPPPKRLSSVSGPSPEPPPL-DESPGPKEGATG---PRRRTLSEPAGPSEPP 917
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 35.8 bits (81), Expect = 0.070
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 84 PPPPLGASSQPRPGGDSSPVVDSGPG----PASNLTSVPVPHTTALSLPACPEESP 135
PPPP AS QP P V PG P+++LT P P A+++P+ +SP
Sbjct: 386 PPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTVPSSLPQSP 441
Score = 31.2 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 84 PPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACPEESP 135
PPPP A + PGG P GP +V VP SLP P E+P
Sbjct: 398 PPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTVPS----SLPQSPPENP 445
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 35.8 bits (81), Expect = 0.070
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 84 PPPPLGASSQPRPGGDSSPVVDSGPG----PASNLTSVPVPHTTALSLPACPEESP 135
PPPP AS QP P V PG P+++LT P P A+++P+ +SP
Sbjct: 370 PPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTVPSSLPQSP 425
Score = 31.2 bits (69), Expect = 1.7
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 84 PPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACPEESP 135
PPPP A + PGG P GP +V VP SLP P E+P
Sbjct: 382 PPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTVPS----SLPQSPPENP 429
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 35.8 bits (81), Expect = 0.070
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 84 PPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACP----------EE 133
P P +G S P P + P + P P+ L P P P+ P EE
Sbjct: 319 PEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENGLSEE 378
Query: 134 SP-LLVGP--MLIEFNMPVDLELVAKQNPNVKMGGRYAPRD 171
P LLV P ++ E +D EL K P +G ++ RD
Sbjct: 379 KPHLLVFPPDLVAEQFTLMDAELFKKVVPYHCLGSIWSQRD 419
Score = 28.9 bits (63), Expect = 8.5
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 76 ELRTGGARPPPPLGASS-QPRPGGDSSP--VVDSGPGPASNLTSVPVP-------HTTAL 125
EL AR P P+ A + +P P +P ++ P PA L P P AL
Sbjct: 274 ELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAVGLESAPAPAL 333
Query: 126 SLPACPEESP 135
L PE+ P
Sbjct: 334 ELEPAPEQDP 343
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 35.8 bits (81), Expect = 0.070
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 84 PPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACP----------EE 133
P P +G S P P + P + P P+ L P P P+ P EE
Sbjct: 264 PEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENGLSEE 323
Query: 134 SP-LLVGP--MLIEFNMPVDLELVAKQNPNVKMGGRYAPRD 171
P LLV P ++ E +D EL K P +G ++ RD
Sbjct: 324 KPHLLVFPPDLVAEQFTLMDAELFKKVVPYHCLGSIWSQRD 364
Score = 28.9 bits (63), Expect = 8.5
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 76 ELRTGGARPPPPLGASS-QPRPGGDSSP--VVDSGPGPASNLTSVPVP-------HTTAL 125
EL AR P P+ A + +P P +P ++ P PA L P P AL
Sbjct: 219 ELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAVGLESAPAPAL 278
Query: 126 SLPACPEESP 135
L PE+ P
Sbjct: 279 ELEPAPEQDP 288
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 35.4 bits (80), Expect = 0.091
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 45 RDLSRLPQLVGVSTPLQ---GGSNSAAAIGQSSGELRTGGARPPPP-----LGASSQPRP 96
R+L +P +G PL GG G SGE G +PPPP G +Q R
Sbjct: 148 RELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGEREGGAPQPPPPRGWRGKGVRAQQRG 207
Query: 97 GGDSSPVVDSGPGPASN 113
G + P P+S+
Sbjct: 208 GSGGE---GASPSPSSS 221
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 35.4 bits (80), Expect = 0.091
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 28/107 (26%)
Query: 42 LAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSS 101
L G S LPQ+ PL GS + + S ++R PP +SS P
Sbjct: 1250 LPGDVESHLPQIKTSLAPLATGSAGLSPSTEYSSDIRLPPVAPP---ASSSAP------- 1299
Query: 102 PVVDSGPGPASNLTSVPVPHTTALSLPACPEESPLLVGPMLIEFNMP 148
TS P L+LPACP+ LV P+ ++ NMP
Sbjct: 1300 -------------TSAP-----PLALPACPDTMVSLVVPVRVQTNMP 1328
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 35.4 bits (80), Expect = 0.091
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 28/107 (26%)
Query: 42 LAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSS 101
L G S LPQ+ PL GS + + S ++R PP +SS P
Sbjct: 1250 LPGDVESHLPQIKTSLAPLATGSAGLSPSTEYSSDIRLPPVAPP---ASSSAP------- 1299
Query: 102 PVVDSGPGPASNLTSVPVPHTTALSLPACPEESPLLVGPMLIEFNMP 148
TS P L+LPACP+ LV P+ ++ NMP
Sbjct: 1300 -------------TSAP-----PLALPACPDTMVSLVVPVRVQTNMP 1328
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 34.7 bits (78), Expect = 0.16
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 84 PPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACP 131
PPPP +++ P G + P + +GPGPA P P A S A P
Sbjct: 88 PPPPPASAAAPASGPPAPPGLAAGPGPAG---GAPTPALVAGSSAAAP 132
>gi|25952087 potassium voltage-gated channel, shaker-related
subfamily, member 5 [Homo sapiens]
Length = 613
Score = 34.7 bits (78), Expect = 0.16
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 46 DLSRLPQLVGVSTPLQGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPR----PGGDSS 101
+++ +P G + ++GG + A GQ++G G + PP G S P+ G +
Sbjct: 2 EIALVPLENGGAMTVRGGDEARAGCGQATG----GELQCPPTAGLSDGPKEPAPKGRGAQ 57
Query: 102 PVVDSGPGPASNLTSVPVPHTTALSLPACPEESP 135
DSG P P+P LP PEE P
Sbjct: 58 RDADSGVRPLP-----PLPDPGVRPLPPLPEELP 86
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 34.7 bits (78), Expect = 0.16
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 83 RPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACP 131
RPPPP+ +P P G + PVV+ P P + P+P++ + SLP P
Sbjct: 174 RPPPPV----RPVPQG-TPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGP 217
Score = 30.8 bits (68), Expect = 2.2
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSSGELRTGGARPPPPL-----GASSQPRPGGDSSPVVDSGPG 109
G PL+GG + Q S TGG +PP P+ QP+P P GP
Sbjct: 281 GPGYPLRGGRAPSPGYPQQSPYPATGG-KPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPA 339
Query: 110 PASNLTSVPVP 120
P P P
Sbjct: 340 PPYGFPPPPGP 350
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 34.3 bits (77), Expect = 0.20
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 55 GVSTPLQGGSNSAAAIGQ-------SSGELRTGGARPPPPLGASSQPRPGGDSSPVVD-- 105
G +TPL S S+A+ G S+ TG A P P G SS PV D
Sbjct: 1644 GHATPLHVTSPSSASTGHATPLPVTSTSSASTGHATPLPVTGLSSATTDDTTRLPVTDVS 1703
Query: 106 ------SGPGPASNLTSVPVPHTTALSLPACPEESPLLVGPMLI 143
+ P P ++L+SV TT L + + S P+L+
Sbjct: 1704 SASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHASPLLV 1747
Score = 34.3 bits (77), Expect = 0.20
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G ++ + TG A P P G SS PV D
Sbjct: 3196 GHATPLHVTSPSSASTGDTTPVPVTDTSSVSTGHATPLPVTGLSSASTGDTTRLPVTDIS 3255
Query: 108 PGPASNLTSVPVPHTTALS 126
T +PV +T+++S
Sbjct: 3256 SASTGQATPLPVTNTSSVS 3274
Score = 33.9 bits (76), Expect = 0.27
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 55 GVSTPLQGGSNSAAAIGQ-------SSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G S TG A P P SS GD+ P+ +
Sbjct: 1276 GDTTPLPVTSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSAST--GDTMPLPVTS 1333
Query: 108 PGPASNLTSVPVPHTTALSL 127
P AS + P+P T A S+
Sbjct: 1334 PSSASTGDTTPLPVTDASSV 1353
Score = 33.9 bits (76), Expect = 0.27
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 55 GVSTPLQGGSNSAAAIGQ-------SSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G S TG A P P SS GD+ P+ +
Sbjct: 1484 GDTTPLPVTSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSAST--GDTMPLPVTS 1541
Query: 108 PGPASNLTSVPVPHTTALSL 127
P AS + P+P T A S+
Sbjct: 1542 PSSASTGDTTPLPVTDASSV 1561
Score = 33.5 bits (75), Expect = 0.35
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S+A+ GQ++ + TG P P SS S PV D+
Sbjct: 3068 GHATPLLVTDASSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATSLPVTDTS 3127
Query: 108 PGPASNLTSVPVPHTTA 124
+ TS+PV T++
Sbjct: 3128 SASTGDTTSLPVTDTSS 3144
Score = 33.1 bits (74), Expect = 0.45
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSSG-------ELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S+A+ G ++ TG A P P SS PV D+
Sbjct: 2812 GDTTPLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLLPVTDTS 2871
Query: 108 PGPASNLTSVPVPHTTALS 126
+ TS+PV T+++S
Sbjct: 2872 SASIGHATSLPVTDTSSIS 2890
Score = 32.7 bits (73), Expect = 0.59
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 34 LGVTLVYYLAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSGELRTGGARPPPPLGASSQ 93
L VT+ + D S LP + G S+ G + SS + TG A P P SS
Sbjct: 3361 LHVTIPSSASTGDTSTLP-VTGASSASTGHATPLPVTDTSS--VSTGHATPLPVTSLSSV 3417
Query: 94 PRPGGDSSPVVDSGPGPASNLTSVPVPHTTALSLPACPEESPLLV 138
GD++P+ + AS + P+P T+LS + + +PLLV
Sbjct: 3418 ST--GDTTPLPVTDASSASTGQATPLP-VTSLSSVSTGDTTPLLV 3459
Score = 32.7 bits (73), Expect = 0.59
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G TPL S S+A+ G ++ + TG A P P ASS GD++P+ +
Sbjct: 3612 GHVTPLPVTSTSSASTGHATPLLVTDASSVSTGHATPLPVTDASSAST--GDTTPLPVTD 3669
Query: 108 PGPASNLTSVPVPHTTALSLPACPEESPLLV 138
AS + P+P T+LS + + +PL V
Sbjct: 3670 TSSASTGQATPLP-VTSLSSVSTGDTTPLPV 3699
Score = 32.3 bits (72), Expect = 0.77
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSSG-------ELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G ++ TG A P P SS PV D+
Sbjct: 2572 GHATPLPVTSTSSASTGDTTPLPVTDTYSASTGQATPLPVTDTSSASTGDTTPLPVTDTS 2631
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +PV +T+++S
Sbjct: 2632 SASTGHATPLPVTNTSSVS 2650
Score = 32.3 bits (72), Expect = 0.77
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+ + G ++ + TG A P P SS PV D+
Sbjct: 3436 GQATPLPVTSLSSVSTGDTTPLLVTDASSVSTGHATPLPVTDTSSASTGDTTRLPVTDTS 3495
Query: 108 PGPASNLTSVPVPHTTALSLPACPEESPLLV 138
T +PV T+LS + + +PLLV
Sbjct: 3496 SASTGQATPLPV---TSLSSVSTGDTTPLLV 3523
Score = 32.0 bits (71), Expect = 1.0
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL ++A+ G ++ + TG A P SS GD++P+ +
Sbjct: 1884 GDTTPLPVTDTNSASTGDTTPLHVTDASSVSTGHATSLPVTSLSSAST--GDTTPLPVTS 1941
Query: 108 PGPASNLTSVPVPHTTALSLP 128
P AS+ + P+P T A S+P
Sbjct: 1942 PSSASSGHTTPLPVTDASSVP 1962
Score = 32.0 bits (71), Expect = 1.0
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 55 GVSTPLQGGSNSAAAIGQSSGEL-------RTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G ++ L TG A P P SS GD++P+ +
Sbjct: 3052 GDTTPLPVTSPSSASTGHATPLLVTDASSASTGQATPLPVTSLSSVST--GDTTPLPVTS 3109
Query: 108 PGPAS--NLTSVPVPHTTALS 126
P AS + TS+PV T++ S
Sbjct: 3110 PSSASTGHATSLPVTDTSSAS 3130
Score = 31.6 bits (70), Expect = 1.3
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G TPL S S+A+ G S+ TG P P SS PV D+
Sbjct: 1036 GHVTPLPVTSFSSASTGDSTPLPVTDTSSASTGHVTPLPVTSLSSASTGDTTPLPVTDTS 1095
Query: 108 PGPASNLTSVPVPHTTALS 126
+ TS+PV T+++S
Sbjct: 1096 SASTGHATSLPVTDTSSVS 1114
Score = 31.2 bits (69), Expect = 1.7
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQ-------SSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G STPL S+A+ G S TG P P SS S PV D+
Sbjct: 1052 GDSTPLPVTDTSSASTGHVTPLPVTSLSSASTGDTTPLPVTDTSSASTGHATSLPVTDTS 1111
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +PV T++ S
Sbjct: 1112 SVSTGHTTPLPVTDTSSAS 1130
Score = 31.2 bits (69), Expect = 1.7
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S+A+ GQ++ + TG P P SS S PV D+
Sbjct: 2780 GDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDTSSASTGHATSLPVTDTS 2839
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +P T++ S
Sbjct: 2840 SASTGHATPLPDTDTSSAS 2858
Score = 31.2 bits (69), Expect = 1.7
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 48 SRLPQLVGVSTPLQGGSNSAAAIGQ-------SSGELRTGGARPPPPLGASSQPRPGGDS 100
SR G +TPL S+ + G S+ + TG A P P SS G +
Sbjct: 3845 SRSSASTGHATPLPVTDTSSVSTGHATPLPVTSTSSVSTGHATPLPVTSPSSAST--GHA 3902
Query: 101 SPVVDSGPGPASNLTSVPVPHTTALSL 127
+PV + AS + P+P T A SL
Sbjct: 3903 TPVPVTSTSSASTGDTTPLPVTNASSL 3929
Score = 30.8 bits (68), Expect = 2.2
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G ++ + TG A P SS S PV D+
Sbjct: 2124 GDTTPLPVTSPSSASTGDTTPLPVTDTSSVSTGHATSLPVTDTSSASTGHATSLPVTDTS 2183
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +PV T++ S
Sbjct: 2184 SASTGHATPLPVTDTSSAS 2202
Score = 30.8 bits (68), Expect = 2.2
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G ++ + TG P P +SS PV D+
Sbjct: 2332 GDTTPLPVTSPSSASTGHATPLHVTDASSVSTGDTTPLPVTSSSSASSGHTTPLPVTDAS 2391
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +PV T++ S
Sbjct: 2392 SASTGDTTPLPVTDTSSAS 2410
Score = 30.8 bits (68), Expect = 2.2
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 55 GVSTPLQGGSNSAAAIGQ-------SSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+ + G S TG A P SS S PV D+
Sbjct: 3084 GQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATSLPVTDTSSASTGDTTSLPVTDTS 3143
Query: 108 PGPASNLTSVPVPHTTALSLPACPEESPLLV 138
+ TS+PV T++ S + +PLLV
Sbjct: 3144 SAYTGDTTSLPVTDTSSSS---TGDTTPLLV 3171
Score = 30.8 bits (68), Expect = 2.2
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G +S TG A P P SS GD++P+ +
Sbjct: 3932 GHATPLHVTSPSSASRGDTSTLPVTDASSASTGHATPLPLTSLSSVST--GDTTPLPVTD 3989
Query: 108 PGPASNLTSVPVPHTTALSLPACPEESPLLV 138
AS + P+P T+LS + + +PL V
Sbjct: 3990 TSSASTGQATPLP-VTSLSSVSTGDTTPLPV 4019
Score = 30.4 bits (67), Expect = 2.9
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSSGEL-------RTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G ++ L TG A P P ASS S PV
Sbjct: 1180 GDTTPLPVTSPSSASTGHATPLLVTDTSSASTGHATPLPVTDASSVSTDHATSLPVTIPS 1239
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +PV T++ S
Sbjct: 1240 AASTGHTTPLPVTDTSSAS 1258
Score = 30.4 bits (67), Expect = 2.9
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSSGEL-------RTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G ++ L TG A P P ASS S PV
Sbjct: 1388 GDTTPLPVTSPSSASTGHATPLLVTDTSSASTGHATPLPVTDASSVSTDHATSLPVTIPS 1447
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +PV T++ S
Sbjct: 1448 AASTGHTTPLPVTDTSSAS 1466
Score = 30.4 bits (67), Expect = 2.9
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQS-------SGELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+A+ G + + TG A P P SS PV D+
Sbjct: 2204 GQATPLPVTSPSSASTGHAIPLLVTDTSSASTGQATPLPVTSLSSASTGDTTPLPVTDAS 2263
Query: 108 PGPASNLTSVPVPHTTALS 126
+ TS+PV +++S
Sbjct: 2264 SVSTGHATSLPVTSLSSVS 2282
Score = 30.0 bits (66), Expect = 3.8
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 55 GVSTPLQGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNL 114
G +TPL S S+A+ G ++ P P ASS P S PV D+ +
Sbjct: 1932 GDTTPLPVTSPSSASSGHTT---------PLPVTDASSVPTGHATSLPVTDASSVSTGHA 1982
Query: 115 TSVPVPHTTALS 126
T +PV +++S
Sbjct: 1983 TPLPVTDASSVS 1994
Score = 30.0 bits (66), Expect = 3.8
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S S+ + G ++ TG A P P SS PV D+
Sbjct: 2764 GHATPLPLTSLSSVSTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDTS 2823
Query: 108 PGPASNLTSVPVPHTTALS 126
+ TS+PV T++ S
Sbjct: 2824 SASTGHATSLPVTDTSSAS 2842
Score = 30.0 bits (66), Expect = 3.8
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 46 DLSRLPQL------VGVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASS 92
D +RLP G +TPL S S+A+ G ++ + TG A P SS
Sbjct: 3789 DTTRLPVTDVSSASTGHATPLPVTSTSSASTGDTTPLPVTDTSSVSTGHATSLPVTSRSS 3848
Query: 93 QPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALS 126
PV D+ + T +PV T+++S
Sbjct: 3849 ASTGHATPLPVTDTSSVSTGHATPLPVTSTSSVS 3882
Score = 29.6 bits (65), Expect = 5.0
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S+A+ G ++ + TG P P SS PV D+
Sbjct: 2940 GHATPLPVTDTSSASTGHATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHTTPLPVTDTS 2999
Query: 108 PGPASNLTSVPVPHTTALS 126
T++PV T++ S
Sbjct: 3000 SASTGQATALPVTSTSSAS 3018
Score = 29.6 bits (65), Expect = 5.0
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 24/163 (14%)
Query: 31 ALHLGVTLVYYLAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSGELRTGGARPPPPLGA 90
A L VT + ++ D + LP V + + G ++ + +S + TG P P
Sbjct: 3998 ATPLPVTSLSSVSTGDTTPLP--VTIPSSASSGHTTSLPVTDASS-VSTGHGTPLPVTST 4054
Query: 91 SSQPRPGGDSSPVVDSGPGPASNLTSVPVPHT-------------TALSLPACPEESPLL 137
SS PV D+ + T +PV T T+LS + +PL
Sbjct: 4055 SSASTGDTTPLPVTDTSSASTGHATPLPVTDTSSASTGHATPLPVTSLSSVSTGHATPLA 4114
Query: 138 V----GPMLIEFNMPVDLELVAKQNPNVKM-GGRYAPRDCVSP 175
V + + P+ +E P++K GGR R SP
Sbjct: 4115 VSSATSASTVSSDSPLKMETPGMTTPSLKTDGGR---RTATSP 4154
Score = 29.3 bits (64), Expect = 6.5
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQSSG-------ELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S+ + G ++ TG P P SS PV D+
Sbjct: 1900 GDTTPLHVTDASSVSTGHATSLPVTSLSSASTGDTTPLPVTSPSSASSGHTTPLPVTDAS 1959
Query: 108 PGPASNLTSVPVPHTTALS 126
P + TS+PV +++S
Sbjct: 1960 SVPTGHATSLPVTDASSVS 1978
Score = 29.3 bits (64), Expect = 6.5
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Query: 31 ALHLGVTLVYYLAGRDLSRLPQL------VGVSTPLQGGSNSAAAIGQ-------SSGEL 77
A L VT + + D +RLP G +TPL + S+ + G S
Sbjct: 3230 ATPLPVTGLSSASTGDTTRLPVTDISSASTGQATPLPVTNTSSVSTGDTMPLPVTSPSSA 3289
Query: 78 RTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVPHTTALS 126
TG A P P SS PV + + T +PV T++ S
Sbjct: 3290 STGHATPLPVTSTSSASTGHATPVPVTSTSSASTGHTTPLPVTDTSSAS 3338
Score = 29.3 bits (64), Expect = 6.5
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 55 GVSTPLQGGSNSAAAIGQ-------SSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSG 107
G +TPL S+ + G S TG A P P G SS PV D+
Sbjct: 3708 GHATPLPVTIPSSVSTGDTMPLPVTSPSSASTGHATPLPVTGLSSASTGDTTPLPVTDTS 3767
Query: 108 PGPASNLTSVPVPHTTALS 126
+ T +PV T++ S
Sbjct: 3768 SASTRHATPLPVTDTSSAS 3786
Score = 28.9 bits (63), Expect = 8.5
Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 21/117 (17%)
Query: 46 DLSRLPQL------VGVSTPLQGGSNSAAAIGQSS-------GELRTGGARPPPPLGASS 92
D +RLP G +TPL S S+ + G ++ + TG A P P SS
Sbjct: 3485 DTTRLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLLVTDASSVSTGHATPLPVTDTSS 3544
Query: 93 QPRPGGDSSPVVDSGPGPASNLTSVPVP--------HTTALSLPACPEESPLLVGPM 141
PV D+ T +PV HTT L + + S V P+
Sbjct: 3545 ASTGDTTRLPVTDTSSASTGQATPLPVTIPSSSSSGHTTPLPVTSTSSVSTGHVTPL 3601
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 34.3 bits (77), Expect = 0.20
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 48 SRLPQLVGVSTPLQGGSNSAAAIGQS-SGELRTGGARP--PPPLGASSQPRPGGDSSPVV 104
S+LP L + PL G+ +AA G + GA+P P GAS+ P S+P
Sbjct: 256 SQLPGLAAL--PLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAPAA 313
Query: 105 DSG-PGPASNLTSVPVPHTTALSLPACPEESPLLVGPMLI 143
S P PA+ + P P + A S P P L L+
Sbjct: 314 PSAAPAPAAPAPA-PAPQSAASSQPQSASTPPALAPGSLL 352
>gi|7661886 DAZ associated protein 2 isoform a [Homo sapiens]
Length = 168
Score = 34.3 bits (77), Expect = 0.20
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 11 SAAMPGASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVSTPLQGGSNSAAAI 70
SAA PGASL VAV L + + YY G G + ++GG ++ A
Sbjct: 62 SAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYP-----PGSTVLVEGGYDAGARF 116
Query: 71 GQSSGELRTGGARPPPPLG 89
G + T G PPPP G
Sbjct: 117 GAGA----TAGNIPPPPPG 131
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 34.3 bits (77), Expect = 0.20
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 61 QGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPA--SNLTSVP 118
+G AA QS+G + P P +PV+ + P P +N+TSVP
Sbjct: 153 KGKGRKPAAGAQSAGTQQVAAVSSVSPATPFQSVPPTVSQTPVIAATPVPTITANVTSVP 212
Query: 119 VPHTTALSLPACP 131
VP A PA P
Sbjct: 213 VPPAAAPPPPATP 225
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,209,848
Number of Sequences: 37866
Number of extensions: 937639
Number of successful extensions: 6929
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 5976
Number of HSP's gapped (non-prelim): 1149
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.