Search of human proteins with 76781482

Search of human proteins with 76781482

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|76781482 vascular endothelial growth factor A isoform c
precursor [Homo sapiens]
         (389 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|76781482 vascular endothelial growth factor A isoform c precu...   816   0.0  
gi|76781481 vascular endothelial growth factor A isoform b precu...   809   0.0  
gi|76781480 vascular endothelial growth factor A isoform a precu...   803   0.0  
gi|76781483 vascular endothelial growth factor A isoform d precu...   768   0.0  
gi|76781487 vascular endothelial growth factor A isoform g precu...   754   0.0  
gi|76781484 vascular endothelial growth factor A isoform e precu...   730   0.0  
gi|76781485 vascular endothelial growth factor A isoform f precu...   669   0.0  
gi|20149543 placental growth factor, vascular endothelial growth...   144   1e-34
gi|4507887 vascular endothelial growth factor B [Homo sapiens]        104   1e-22
gi|4885653 vascular endothelial growth factor C preproprotein [H...    77   3e-14
gi|4758378 vascular endothelial growth factor D preproprotein [H...    69   6e-12
gi|77695917 platelet-derived growth factor alpha isoform 1 prepr...    50   5e-06
gi|239757070 PREDICTED: hypothetical protein [Homo sapiens]            45   1e-04
gi|239751580 PREDICTED: hypothetical protein [Homo sapiens]            45   1e-04
gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo ...    45   1e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      44   2e-04
gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]         44   2e-04
gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens]        44   3e-04
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo...    44   3e-04
gi|15451786 platelet-derived growth factor beta isoform 2 prepro...    43   4e-04
gi|4505681 platelet-derived growth factor beta isoform 1 preprop...    43   4e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    43   4e-04
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    43   6e-04
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    43   6e-04
gi|30795231 brain abundant, membrane attached signal protein 1 [...    42   7e-04
gi|239755394 PREDICTED: hypothetical protein [Homo sapiens]            41   0.002
gi|239744215 PREDICTED: hypothetical protein [Homo sapiens]            41   0.002
gi|9994187 platelet-derived growth factor C precursor [Homo sapi...    41   0.002
gi|112421108 capicua homolog [Homo sapiens]                            40   0.004
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       39   0.006

>gi|76781482 vascular endothelial growth factor A isoform c
           precursor [Homo sapiens]
          Length = 389

 Score =  816 bits (2107), Expect = 0.0
 Identities = 389/389 (100%), Positives = 389/389 (100%)

Query: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
           MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60

Query: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
           CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120

Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
           GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180

Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
           MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240

Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
           IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300

Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK 360
           SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK
Sbjct: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK 360

Query: 361 CSCKNTDSRCKARQLELNERTCRCDKPRR 389
           CSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 361 CSCKNTDSRCKARQLELNERTCRCDKPRR 389


>gi|76781481 vascular endothelial growth factor A isoform b
           precursor [Homo sapiens]
          Length = 395

 Score =  809 bits (2090), Expect = 0.0
 Identities = 389/395 (98%), Positives = 389/395 (98%), Gaps = 6/395 (1%)

Query: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
           MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60

Query: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
           CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120

Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
           GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180

Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
           MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240

Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
           IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300

Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSR------PCGPCSERRKHLFVQ 354
           SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSR      PCGPCSERRKHLFVQ
Sbjct: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ 360

Query: 355 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 389
           DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 361 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 395


>gi|76781480 vascular endothelial growth factor A isoform a
           precursor [Homo sapiens]
          Length = 412

 Score =  803 bits (2073), Expect = 0.0
 Identities = 389/412 (94%), Positives = 389/412 (94%), Gaps = 23/412 (5%)

Query: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
           MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60

Query: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
           CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120

Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
           GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180

Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
           MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240

Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
           IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300

Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSR--------------------- 339
           SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSR                     
Sbjct: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVYVGARCCLMPWSLPG 360

Query: 340 --PCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 389
             PCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 361 PHPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 412


>gi|76781483 vascular endothelial growth factor A isoform d
           precursor [Homo sapiens]
          Length = 371

 Score =  768 bits (1983), Expect = 0.0
 Identities = 370/389 (95%), Positives = 370/389 (95%), Gaps = 18/389 (4%)

Query: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
           MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60

Query: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
           CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120

Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
           GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180

Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
           MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240

Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
           IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300

Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK 360
           SFLQHNKCECRPKKDRARQE                   PCGPCSERRKHLFVQDPQTCK
Sbjct: 301 SFLQHNKCECRPKKDRARQE------------------NPCGPCSERRKHLFVQDPQTCK 342

Query: 361 CSCKNTDSRCKARQLELNERTCRCDKPRR 389
           CSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 343 CSCKNTDSRCKARQLELNERTCRCDKPRR 371


>gi|76781487 vascular endothelial growth factor A isoform g
           precursor [Homo sapiens]
          Length = 371

 Score =  754 bits (1946), Expect = 0.0
 Identities = 364/383 (95%), Positives = 364/383 (95%), Gaps = 18/383 (4%)

Query: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
           MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60

Query: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
           CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120

Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
           GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180

Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
           MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240

Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
           IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300

Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK 360
           SFLQHNKCECRPKKDRARQE                   PCGPCSERRKHLFVQDPQTCK
Sbjct: 301 SFLQHNKCECRPKKDRARQE------------------NPCGPCSERRKHLFVQDPQTCK 342

Query: 361 CSCKNTDSRCKARQLELNERTCR 383
           CSCKNTDSRCKARQLELNERTCR
Sbjct: 343 CSCKNTDSRCKARQLELNERTCR 365


>gi|76781484 vascular endothelial growth factor A isoform e
           precursor [Homo sapiens]
          Length = 354

 Score =  730 bits (1884), Expect = 0.0
 Identities = 352/371 (94%), Positives = 352/371 (94%), Gaps = 18/371 (4%)

Query: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
           MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60

Query: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
           CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120

Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
           GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180

Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
           MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240

Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
           IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300

Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK 360
           SFLQHNKCECRPKKDRARQE                   PCGPCSERRKHLFVQDPQTCK
Sbjct: 301 SFLQHNKCECRPKKDRARQE------------------NPCGPCSERRKHLFVQDPQTCK 342

Query: 361 CSCKNTDSRCK 371
           CSCKNTDSRCK
Sbjct: 343 CSCKNTDSRCK 353


>gi|76781485 vascular endothelial growth factor A isoform f
           precursor [Homo sapiens]
          Length = 327

 Score =  669 bits (1725), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
           MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1   MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60

Query: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
           CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61  CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120

Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
           GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180

Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
           MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240

Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
           IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300

Query: 301 SFLQHNKCECRPKKDRARQEK 321
           SFLQHNKCECRPKKDRARQEK
Sbjct: 301 SFLQHNKCECRPKKDRARQEK 321


>gi|20149543 placental growth factor, vascular endothelial growth
           factor-related protein [Homo sapiens]
          Length = 170

 Score =  144 bits (364), Expect = 1e-34
 Identities = 65/145 (44%), Positives = 95/145 (65%), Gaps = 8/145 (5%)

Query: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268
           ++ G G +  EVV F +V+ RSYC  +E LVD+  EYP E+E++F PSCV L+RC GCC 
Sbjct: 29  LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88

Query: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGKG 328
           DE L CVP E +N+TMQ+++I+        E++F QH +CECRP +++ + E++  +G+G
Sbjct: 89  DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148

Query: 329 KGQKRKRKKSRP-----CGPCSERR 348
              KR+R+K RP     CG    RR
Sbjct: 149 ---KRRREKQRPTDCHLCGDAVPRR 170


>gi|4507887 vascular endothelial growth factor B [Homo sapiens]
          Length = 207

 Score =  104 bits (260), Expect = 1e-22
 Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)

Query: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
           LA LL L  A+   + P A G   +  +VV ++DVY R+ C P E +V +  E    +  
Sbjct: 10  LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66

Query: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
              PSCV + RCGGCC D+GLECVPT +  + MQI+ I+ +    +GEMS  +H++CECR
Sbjct: 67  QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125

Query: 312 PKK 314
           PKK
Sbjct: 126 PKK 128


>gi|4885653 vascular endothelial growth factor C preproprotein [Homo
           sapiens]
          Length = 419

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 25/184 (13%)

Query: 219 EVVKFMD-VYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPT 277
           E++K +D  ++++ C P E  +D+ +E+       FKP CV + RCGGCCN EGL+C+ T
Sbjct: 117 EILKSIDNEWRKTQCMPREVCIDVGKEFGVATNTFFKPPCVSVYRCGGCCNSEGLQCMNT 176

Query: 278 EESNITMQIMRIKP--HQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKR 335
             S ++  +  I     QG     +SF  H  C C  K D  RQ    +R       R  
Sbjct: 177 STSYLSKTLFEITVPLSQGPKPVTISFANHTSCRCMSKLDVYRQVHSIIR-------RSL 229

Query: 336 KKSRP-CGPCSERRKHLFVQDPQTCKC---------SCKNTDSRCKARQL-----ELNER 380
             + P C   ++     ++ +   C+C         S    DS      +     EL+E 
Sbjct: 230 PATLPQCQAANKTCPTNYMWNNHICRCLAQEDFMFSSDAGDDSTDGFHDICGPNKELDEE 289

Query: 381 TCRC 384
           TC+C
Sbjct: 290 TCQC 293



 Score = 32.0 bits (71), Expect = 0.98
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 10/46 (21%)

Query: 341 CGPCSERRKHLFVQDPQTCKCSCKNT--DSRCKARQLELNERTCRC 384
           CGP  E        D  +C+C CKN    S+C A + E +E TC+C
Sbjct: 304 CGPHKEL-------DRNSCQCVCKNKLFPSQCGANR-EFDENTCQC 341


>gi|4758378 vascular endothelial growth factor D preproprotein [Homo
           sapiens]
          Length = 354

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)

Query: 219 EVVKFMDV-YQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPT 277
           E +K +D  +QR+ C P ET V++  E        FKP CV + RCGGCCN+E L C+ T
Sbjct: 97  ETLKVIDEEWQRTQCSPRETCVEVASELGKSTNTFFKPPCVNVFRCGGCCNEESLICMNT 156

Query: 278 EESNITMQIMRIKP--HQGQHIGEMSFLQHNKCECRPKKDRARQE--KKSVRGKGKGQKR 333
             S I+ Q+  I         +  +    H  C+C P   R      ++S++   + +  
Sbjct: 157 STSYISKQLFEISVPLTSVPELVPVKVANHTGCKCLPTAPRHPYSIIRRSIQIPEEDRCS 216

Query: 334 KRKKSRPC----------------GPCSERRKHLFVQDPQTCKCSCKNTDSRCKA----- 372
             KK  P                  P +    H  +Q+P  C       + RC+      
Sbjct: 217 HSKKLCPIDMLWDSNKCKCVLQEENPLAGTEDHSHLQEPALCGPHMMFDEDRCECVCKTP 276

Query: 373 --RQLELNERTCRC 384
             + L  + + C C
Sbjct: 277 CPKDLIQHPKNCSC 290


>gi|77695917 platelet-derived growth factor alpha isoform 1
           preproprotein [Homo sapiens]
          Length = 211

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 246 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRI-----KPHQGQHIGEM 300
           P    ++  P CV + RC GCCN   ++C P+   + ++++ ++     KP   +   ++
Sbjct: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169

Query: 301 SFLQHNKCECRPKK-DRARQEKKSVRGKGKGQKRKRKKSRP 340
              +H +C C     +   +E+ + R +  G+KRKRK+ +P
Sbjct: 170 RLEEHLECACATTSLNPDYREEDTGRPRESGKKRKRKRLKP 210


>gi|239757070 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 18/116 (15%)

Query: 69  VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
           +R G+ E  GA         + +    +++ E  EE G Q +  +  PG+ +G A     
Sbjct: 16  MRPGQGEGLGA---------DERRHHVQQQHEGHEEGGSQQQHRSAGPGARSGRAGAAGQ 66

Query: 129 SAPAARAPQALARASG--------RGGRVARRGAEESGPPHSPSRRGSASRAGPGR 176
            A    A +  +RA+G        R G   R G EE  P  +P RRG ASR   GR
Sbjct: 67  GAQGWAAARRESRAAGGRLECLGLRAG-AGRGGGEEEEPARAPPRRGGASRGRVGR 121


>gi|239751580 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 18/116 (15%)

Query: 69  VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
           +R G+ E  GA         + +    +++ E  EE G Q +  +  PG+ +G A     
Sbjct: 16  MRPGQGEGLGA---------DERRHHVQQQHEGHEEGGSQQQHRSAGPGARSGRAGAAGQ 66

Query: 129 SAPAARAPQALARASG--------RGGRVARRGAEESGPPHSPSRRGSASRAGPGR 176
            A    A +  +RA+G        R G   R G EE  P  +P RRG ASR   GR
Sbjct: 67  GAQGWAAARRESRAAGGRLECLGLRAG-AGRGGGEEEEPARAPPRRGGASRGRVGR 121


>gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo
           sapiens]
          Length = 195

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 18/116 (15%)

Query: 69  VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
           +R G+ E  GA         + +    +++ E  EE G Q +  +  PG+ +G A     
Sbjct: 16  MRPGQGEGLGA---------DERRHHVQQQHEGHEEGGSQQQHRSAGPGARSGRAGAAGQ 66

Query: 129 SAPAARAPQALARASG--------RGGRVARRGAEESGPPHSPSRRGSASRAGPGR 176
            A    A +  +RA+G        R G   R G EE  P  +P RRG ASR   GR
Sbjct: 67  GAQGWAAARRESRAAGGRLECLGLRAG-AGRGGGEEEEPARAPPRRGGASRGRVGR 121


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 21/173 (12%)

Query: 11  SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLF-VQLLGCSRFGGAVV 69
           SP  +  PG+         RG+   P P G     GA G A         G   F GAV 
Sbjct: 291 SPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVG 350

Query: 70  RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADS 129
             GEA P G       G E PQ   GE         GP    GA  P    G     AD 
Sbjct: 351 AKGEAGPQG-----PRGSEGPQGVRGEP--------GPPGPAGAAGPAGNPG-----ADG 392

Query: 130 APAARAPQALARASGRGGRVARRG-AEESGPPHSPSRRGSASRAG-PGRASET 180
            P A+        +G  G    RG +   GP   P  +G++   G PG   +T
Sbjct: 393 QPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDT 445



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 52/169 (30%), Positives = 58/169 (34%), Gaps = 23/169 (13%)

Query: 25  DAAASRGQGPE--------PAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEP 76
           DA A    GP         P P G V   GA+G          G + F GA  R G   P
Sbjct: 831 DAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP--GATGFPGAAGRVGPPGP 888

Query: 77  SGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEA-------AVCADS 129
           SG A         P P   E  +    E GP  R G   P    G A       A     
Sbjct: 889 SGNAGPPG----PPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAG 944

Query: 130 APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRAS 178
           AP    PQ +A   G  G   +RG  E G P  P   G   + GP  AS
Sbjct: 945 APGTPGPQGIAGQRGVVGLPGQRG--ERGFPGLPGPSGEPGKQGPSGAS 991



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 49/163 (30%), Positives = 59/163 (36%), Gaps = 13/163 (7%)

Query: 18   PGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPS 77
            PGR  +  A   RG+     P G     GA G      V   G S   G    AG A P 
Sbjct: 1024 PGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGP-----VGPAGKSGDRGETGPAGPAGPV 1078

Query: 78   G-AARSASSGREEPQPEEGEEEEEKEE----ERGPQWRLGARKPGSWTGEAAVCADSAPA 132
            G       +G + P+ ++GE  E+ +      RG     G   P    GE      S PA
Sbjct: 1079 GPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPA 1138

Query: 133  A-RAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
              R P   A A G+ G     G    GPP    R G A   GP
Sbjct: 1139 GPRGPPGSAGAPGKDGLNGLPG--PIGPPGPRGRTGDAGPVGP 1179



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 47/171 (27%), Positives = 59/171 (34%), Gaps = 15/171 (8%)

Query: 11  SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVR 70
           +P    +PG R        +G   +  P G     G  GV  +     +G     GA   
Sbjct: 723 APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGV--RGLTGPIGPPGPAGAPGD 780

Query: 71  AGEAEPSG-----AARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAV 125
            GE+ PSG      AR A   R EP P             GP    G        G+A  
Sbjct: 781 KGESGPSGPAGPTGARGAPGDRGEPGPPG------PAGFAGPPGADGQPGAKGEPGDAGA 834

Query: 126 CADSAPAARA-PQALARASGRGGRVARRGAEES-GPPHSPSRRGSASRAGP 174
             D+ P   A P       G  G    +GA  S GPP +    G+A R GP
Sbjct: 835 KGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGP 885



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 46/180 (25%), Positives = 54/180 (30%), Gaps = 43/180 (23%)

Query: 19   GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
            GR      + + G    P P G   G G RG                G   R GE  P G
Sbjct: 881  GRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGET--------------GPAGRPGEVGPPG 926

Query: 79   ----AARSASSGREEPQPEEGEEEEE-------------KEEERG------PQWRLGARK 115
                A    S G + P    G    +             +  ERG      P    G + 
Sbjct: 927  PPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQG 986

Query: 116  PGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEES-GPPHSPSRRGSASRAGP 174
            P   +GE        P    P  LA   G  GR    GAE S G   SP  +G     GP
Sbjct: 987  PSGASGERG-----PPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGP 1041



 Score = 32.3 bits (72), Expect = 0.75
 Identities = 33/105 (31%), Positives = 36/105 (34%), Gaps = 17/105 (16%)

Query: 70  RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADS 129
           R G   P GA R  +     P P+    E  K  ERG     GA  P    GEA      
Sbjct: 564 RPGPPGPPGA-RGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPP 622

Query: 130 APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
            PA              G    RG  E GP  SP  +G    AGP
Sbjct: 623 GPA--------------GPAGERG--EQGPAGSPGFQGLPGPAGP 651



 Score = 32.0 bits (71), Expect = 0.98
 Identities = 41/152 (26%), Positives = 52/152 (34%), Gaps = 35/152 (23%)

Query: 33   GPEPAPGG-GVEGV-GARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEP 90
            GP  APG  G +G+ G RGV              G    R     P     S   G++ P
Sbjct: 941  GPAGAPGTPGPQGIAGQRGVV-------------GLPGQRGERGFPGLPGPSGEPGKQGP 987

Query: 91   QPEEGEEEEEKEEERGPQWRLG----ARKPGSWTGEAAVCADSAPAARAPQALARASGRG 146
                GE        RGP   +G    A  PG    E A  A+ +P         R    G
Sbjct: 988  SGASGE--------RGPPGPMGPPGLAGPPGESGREGAPGAEGSPG--------RDGSPG 1031

Query: 147  GRVARRGAEESGPPHSPSRRGSASRAGPGRAS 178
             +  R     +GPP +P   G+    GP   S
Sbjct: 1032 AKGDRGETGPAGPPGAPGAPGAPGPVGPAGKS 1063


>gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]
          Length = 598

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 39/140 (27%), Positives = 49/140 (35%), Gaps = 12/140 (8%)

Query: 33  GPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP 92
           G +   GGG  G G  G+           S  G  V++AG   P   AR      E  + 
Sbjct: 35  GDQGKAGGGSPGWGCAGIP---------DSAPGAGVLQAGAVGP---ARGGQGAEEVGES 82

Query: 93  EEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARR 152
             G EE      + P  RL  RKP   +GE     +     R  +    A    G   R 
Sbjct: 83  AGGGEERRVRHPQAPALRLLNRKPQGGSGEIKTPENDLQRGRLSRGPRTAPPAPGMGDRS 142

Query: 153 GAEESGPPHSPSRRGSASRA 172
           G +E   PHSP      S A
Sbjct: 143 GQQERSVPHSPGAPVGTSAA 162


>gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens]
          Length = 1028

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 42/158 (26%), Positives = 55/158 (34%), Gaps = 18/158 (11%)

Query: 18  PGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPS 77
           PG +    A   +G+  EP   G     G+ G +              G   + GE  P 
Sbjct: 358 PGPKGDPGAFGLKGEKGEPGADGEAGRPGSSGPS--------------GDEGQPGEPGPP 403

Query: 78  GAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQ 137
           G    A      P P+    E     ERGP+   G R P    GEA    D       P 
Sbjct: 404 GEKGEAGD-EGNPGPDGAPGERGGPGERGPRGTPGTRGPRGDPGEAGPQGDQ--GREGPV 460

Query: 138 ALARASGRGGRVARRGAE-ESGPPHSPSRRGSASRAGP 174
            +    G  G +  +G   + GPP S   RG+   AGP
Sbjct: 461 GVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGPAGP 498


>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
           motif, 19 preproprotein [Homo sapiens]
          Length = 1207

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 56/177 (31%), Positives = 65/177 (36%), Gaps = 30/177 (16%)

Query: 20  RRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGA 79
           RR  VD A   G   +P   G V GVG  G A     Q  G SR   +V      EP   
Sbjct: 44  RREPVDPAGGSGGSADP---GWVRGVGGGGSAR---AQAAGSSREVRSVAPVPLEEPV-E 96

Query: 80  ARSASSGREEPQPEEGEEEEEKEEERGPQWRLGAR--KPGSWTGEAAVCADSAPAARAPQ 137
            RS S  R  P P EGEE+EE E +  P+   GA    PG+            P +  P 
Sbjct: 97  GRSESRLRPPP-PSEGEEDEELESQELPRGSSGAAALSPGAPASWQPPPPPQPPPSPPPA 155

Query: 138 ALARASG-------------------RGGR-VARRGAEESGPPHSPSRRGSASRAGP 174
             A   G                   R GR +A R A E  P   P   G+AS   P
Sbjct: 156 QHAEPDGDEVLLRIPAFSRDLYLLLRRDGRFLAPRFAVEQRPNPGPGPTGAASAPQP 212


>gi|15451786 platelet-derived growth factor beta isoform 2
           preproprotein [Homo sapiens]
          Length = 226

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 251 YIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHI---GEMSFLQHNK 307
           ++  P CV + RC GCCN+  ++C PT+     +Q+ +I+  + + I     ++   H  
Sbjct: 103 FLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLA 162

Query: 308 CECRPKKDRARQEKKSVRGKGKGQKRKRK 336
           C+C    +     +   R  G  Q+++ K
Sbjct: 163 CKC----ETVAAARPVTRSPGGSQEQRAK 187


>gi|4505681 platelet-derived growth factor beta isoform 1
           preproprotein [Homo sapiens]
          Length = 241

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 251 YIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHI---GEMSFLQHNK 307
           ++  P CV + RC GCCN+  ++C PT+     +Q+ +I+  + + I     ++   H  
Sbjct: 118 FLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLA 177

Query: 308 CECRPKKDRARQEKKSVRGKGKGQKRKRK 336
           C+C    +     +   R  G  Q+++ K
Sbjct: 178 CKC----ETVAAARPVTRSPGGSQEQRAK 202


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 56/196 (28%), Positives = 68/196 (34%), Gaps = 23/196 (11%)

Query: 9   APSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAV 68
           A +  +H L  R   V AAA+   G     G      GA   A              GA 
Sbjct: 35  ASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPA-----------EGAP 83

Query: 69  VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
             A E  P+G AR    G + P P              P  +L     GS    A V A 
Sbjct: 84  GAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAA 143

Query: 129 SAPAA---RAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASETMNFLL 185
           +A AA    AP   A+ +G     AR G      P      G    AGPG A++T+N   
Sbjct: 144 AAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG-AAQTLN--- 199

Query: 186 SWVHWSLALLLYLHHA 201
                  A LL  HHA
Sbjct: 200 -----GSAALLNSHHA 210



 Score = 31.2 bits (69), Expect = 1.7
 Identities = 43/155 (27%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 24  VDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPS--GAAR 81
           V AAA+   GPEPAP G  +  G   +A +      G     G     G  +P+  GAA+
Sbjct: 140 VPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP---GPGPGPGPGPGPGPGKPAGPGAAQ 196

Query: 82  SASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGS---------WTGEA---AVCADS 129
           + +                     GP   L   KP +         + G A   A  A S
Sbjct: 197 TLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPS 256

Query: 130 APAARAPQALARA----SGRGGRVARRGAEESGPP 160
            PAA AP A A A          +AR     +GPP
Sbjct: 257 PPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 58/200 (29%), Positives = 72/200 (36%), Gaps = 34/200 (17%)

Query: 12  PSYHLLPGRRRTVDAAASRG-------QGPEPAPGG----GVEG-------VGARGVALK 53
           P    +PG R     A  +G       +GPE APG     G+ G        GA G   +
Sbjct: 746 PGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGE 805

Query: 54  LFVQ-LLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP----EEGEEEEEKEEER-GP 107
           +      G +   GA    GE  P G A  A     + QP    E+GE  ++ +    GP
Sbjct: 806 VGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGP 865

Query: 108 QWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAE-ESGPPHSPSRR 166
           Q   GA  P   TG        A  A+ P       G  GRV   G+    GPP  P   
Sbjct: 866 QGPSGAPGPQGPTGVTG--PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPS 923

Query: 167 GSASRAG-------PGRASE 179
           G     G       PGRA E
Sbjct: 924 GKDGPKGARGDSGPPGRAGE 943



 Score = 37.7 bits (86), Expect = 0.018
 Identities = 47/170 (27%), Positives = 59/170 (34%), Gaps = 13/170 (7%)

Query: 11  SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARG-VALKLFVQLLGCSRFGGAVV 69
           +P    +PG + +  A    G    P P G     GA G +  K      G + F G   
Sbjct: 409 NPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQG 468

Query: 70  RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEER----GPQWRLGARKPGSWTGEAAV 125
             GE  P+G       G   P  EEG+     E       GP    GA     + G+  +
Sbjct: 469 PKGEPGPAGP-----QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGL 523

Query: 126 CADS-APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
                AP  R P  LA   G  G   R G  E G P +    G    AGP
Sbjct: 524 AGPKGAPGERGPSGLAGPKGANGDPGRPG--EPGLPGARGLTGRPGDAGP 571



 Score = 35.8 bits (81), Expect = 0.068
 Identities = 45/165 (27%), Positives = 51/165 (30%), Gaps = 22/165 (13%)

Query: 19  GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
           GR     AA +RG   +P P G    VG             G   F GA    GEA P+G
Sbjct: 333 GRTGPAGAAGARGNDGQPGPAGPPGPVGP-----------AGGPGFPGAPGAKGEAGPTG 381

Query: 79  A--ARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAP 136
           A     A   R EP               G     GA+  GS        A   P  R P
Sbjct: 382 ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAK--GSAGAPGIAGAPGFPGPRGP 439

Query: 137 QALARASGRGGRVARRGAE-------ESGPPHSPSRRGSASRAGP 174
                A+G  G   + G         E GP   P   G     GP
Sbjct: 440 PGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGP 484



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 51/196 (26%), Positives = 69/196 (35%), Gaps = 38/196 (19%)

Query: 9   APSPSYHLLPGRRRTVDAAASRG----QGPE--------PAPGG-----GVEGV-GARGV 50
           A  P +   PG +       +RG    QGP         P P G     G +G+ GA+G 
Sbjct: 362 AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGS 421

Query: 51  ALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEE-------EEEKEE 103
           A        G     GA    G   P G     ++G   P+ + GE        E+  + 
Sbjct: 422 A--------GAPGIAGAPGFPGPRGPPGP--QGATGPLGPKGQTGEPGIAGFKGEQGPKG 471

Query: 104 ERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEE-SGPPHS 162
           E GP    GA  P    G+    A   P    P       G  G     G +  +GP  +
Sbjct: 472 EPGPAGPQGAPGPAGEEGKRG--ARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGA 529

Query: 163 PSRRGSASRAGPGRAS 178
           P  RG +  AGP  A+
Sbjct: 530 PGERGPSGLAGPKGAN 545



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 47/194 (24%), Positives = 61/194 (31%), Gaps = 51/194 (26%)

Query: 25   DAAASRGQGPEPAPGG----GVEGV-GARGVALKLFVQLLGCSRFGGAVVRAG----EAE 75
            DA A   QGP  APG     GV G  GARG          G + F GA  R G       
Sbjct: 859  DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP-----GATGFPGAAGRVGPPGSNGN 913

Query: 76   PSGAARSASSGREEPQPEEGEE-------------------EEEKEEERGPQWRLGARKP 116
            P        SG++ P+   G+                    E+ +  + GP    G   P
Sbjct: 914  PGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGP 973

Query: 117  GSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEES----------------GPP 160
                G+  +     P  R  +      G  G   ++GA  +                GP 
Sbjct: 974  QGLAGQRGIVG--LPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPA 1031

Query: 161  HSPSRRGSASRAGP 174
              P R GS    GP
Sbjct: 1032 GEPGREGSPGADGP 1045



 Score = 33.1 bits (74), Expect = 0.44
 Identities = 43/175 (24%), Positives = 57/175 (32%), Gaps = 34/175 (19%)

Query: 19   GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
            G    V A  + G    P P G     G RG A              GA    G + P+G
Sbjct: 1059 GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEA--------------GAQGPMGPSGPAG 1104

Query: 79   AARSASSGREEPQPEEGEEEEEKEE----ERGPQWRLGARKPGSWTGEAAVCADSAPAA- 133
            A      G + P+ ++GE  E  E      RG     G   P   +G+      + P+  
Sbjct: 1105 AR--GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGP 1162

Query: 134  RAPQALARASGRGGRVARRG-------------AEESGPPHSPSRRGSASRAGPG 175
            R P      SG+ G     G                +GPP +P   G     GPG
Sbjct: 1163 RGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPG 1217


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 58/200 (29%), Positives = 72/200 (36%), Gaps = 34/200 (17%)

Query: 12  PSYHLLPGRRRTVDAAASRG-------QGPEPAPGG----GVEG-------VGARGVALK 53
           P    +PG R     A  +G       +GPE APG     G+ G        GA G   +
Sbjct: 677 PGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGE 736

Query: 54  LFVQ-LLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP----EEGEEEEEKEEER-GP 107
           +      G +   GA    GE  P G A  A     + QP    E+GE  ++ +    GP
Sbjct: 737 VGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGP 796

Query: 108 QWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAE-ESGPPHSPSRR 166
           Q   GA  P   TG        A  A+ P       G  GRV   G+    GPP  P   
Sbjct: 797 QGPSGAPGPQGPTGVTG--PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPS 854

Query: 167 GSASRAG-------PGRASE 179
           G     G       PGRA E
Sbjct: 855 GKDGPKGARGDSGPPGRAGE 874



 Score = 37.7 bits (86), Expect = 0.018
 Identities = 47/170 (27%), Positives = 59/170 (34%), Gaps = 13/170 (7%)

Query: 11  SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARG-VALKLFVQLLGCSRFGGAVV 69
           +P    +PG + +  A    G    P P G     GA G +  K      G + F G   
Sbjct: 340 NPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQG 399

Query: 70  RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEER----GPQWRLGARKPGSWTGEAAV 125
             GE  P+G       G   P  EEG+     E       GP    GA     + G+  +
Sbjct: 400 PKGEPGPAGP-----QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGL 454

Query: 126 CADS-APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
                AP  R P  LA   G  G   R G  E G P +    G    AGP
Sbjct: 455 AGPKGAPGERGPSGLAGPKGANGDPGRPG--EPGLPGARGLTGRPGDAGP 502



 Score = 35.8 bits (81), Expect = 0.068
 Identities = 45/165 (27%), Positives = 51/165 (30%), Gaps = 22/165 (13%)

Query: 19  GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
           GR     AA +RG   +P P G    VG             G   F GA    GEA P+G
Sbjct: 264 GRTGPAGAAGARGNDGQPGPAGPPGPVGP-----------AGGPGFPGAPGAKGEAGPTG 312

Query: 79  A--ARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAP 136
           A     A   R EP               G     GA+  GS        A   P  R P
Sbjct: 313 ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAK--GSAGAPGIAGAPGFPGPRGP 370

Query: 137 QALARASGRGGRVARRGAE-------ESGPPHSPSRRGSASRAGP 174
                A+G  G   + G         E GP   P   G     GP
Sbjct: 371 PGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGP 415



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 51/196 (26%), Positives = 69/196 (35%), Gaps = 38/196 (19%)

Query: 9   APSPSYHLLPGRRRTVDAAASRG----QGPE--------PAPGG-----GVEGV-GARGV 50
           A  P +   PG +       +RG    QGP         P P G     G +G+ GA+G 
Sbjct: 293 AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGS 352

Query: 51  ALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEE-------EEEKEE 103
           A        G     GA    G   P G     ++G   P+ + GE        E+  + 
Sbjct: 353 A--------GAPGIAGAPGFPGPRGPPGP--QGATGPLGPKGQTGEPGIAGFKGEQGPKG 402

Query: 104 ERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEE-SGPPHS 162
           E GP    GA  P    G+    A   P    P       G  G     G +  +GP  +
Sbjct: 403 EPGPAGPQGAPGPAGEEGKRG--ARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGA 460

Query: 163 PSRRGSASRAGPGRAS 178
           P  RG +  AGP  A+
Sbjct: 461 PGERGPSGLAGPKGAN 476



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 47/194 (24%), Positives = 61/194 (31%), Gaps = 51/194 (26%)

Query: 25  DAAASRGQGPEPAPGG----GVEGV-GARGVALKLFVQLLGCSRFGGAVVRAG----EAE 75
           DA A   QGP  APG     GV G  GARG          G + F GA  R G       
Sbjct: 790 DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP-----GATGFPGAAGRVGPPGSNGN 844

Query: 76  PSGAARSASSGREEPQPEEGEE-------------------EEEKEEERGPQWRLGARKP 116
           P        SG++ P+   G+                    E+ +  + GP    G   P
Sbjct: 845 PGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGP 904

Query: 117 GSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEES----------------GPP 160
               G+  +     P  R  +      G  G   ++GA  +                GP 
Sbjct: 905 QGLAGQRGIVG--LPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPA 962

Query: 161 HSPSRRGSASRAGP 174
             P R GS    GP
Sbjct: 963 GEPGREGSPGADGP 976



 Score = 33.1 bits (74), Expect = 0.44
 Identities = 43/175 (24%), Positives = 57/175 (32%), Gaps = 34/175 (19%)

Query: 19   GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
            G    V A  + G    P P G     G RG A              GA    G + P+G
Sbjct: 990  GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEA--------------GAQGPMGPSGPAG 1035

Query: 79   AARSASSGREEPQPEEGEEEEEKEE----ERGPQWRLGARKPGSWTGEAAVCADSAPAA- 133
            A      G + P+ ++GE  E  E      RG     G   P   +G+      + P+  
Sbjct: 1036 AR--GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGP 1093

Query: 134  RAPQALARASGRGGRVARRG-------------AEESGPPHSPSRRGSASRAGPG 175
            R P      SG+ G     G                +GPP +P   G     GPG
Sbjct: 1094 RGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPG 1148


>gi|30795231 brain abundant, membrane attached signal protein 1
           [Homo sapiens]
          Length = 227

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 17/150 (11%)

Query: 25  DAAASRGQGP--EPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARS 82
           DAAA++ + P  EP    G     A         Q       GG   +A EA  + A  +
Sbjct: 74  DAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESA 133

Query: 83  ASSGREEPQPEEGEEEEEK-------EEERGPQWRLGARKPGSWTGEAAVCADSAPAA-R 134
           A +  EEP  EEGE ++ +       +E +         KPGS   EAA  +   PAA  
Sbjct: 134 APAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGS--SEAAPSSKETPAATE 191

Query: 135 APQALARASGRGGRVARRGAEESGPPHSPS 164
           AP +  +A G         AEE  P  +P+
Sbjct: 192 APSSTPKAQGPAA-----SAEEPKPVEAPA 216



 Score = 34.7 bits (78), Expect = 0.15
 Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 18/118 (15%)

Query: 72  GEAEPSGAARSASSGRE-----EPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVC 126
           G+AE     + A++ +E     EP+  EG  E + E  + P+    A  P +  GEA   
Sbjct: 64  GKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAA-GGEAPKA 122

Query: 127 ADSAPA---ARAPQALARASGRGGR---------VARRGAEESGPPHSPSRRGSASRA 172
           A++A A   + AP A    S   G           A +  +  G P S S+ GS+  A
Sbjct: 123 AEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAA 180



 Score = 33.5 bits (75), Expect = 0.34
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 3/91 (3%)

Query: 73  EAEPSGAAR--SASSGREEP-QPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADS 129
           E+EP  AA    A  G+E+P Q  EG+ EE++ E+     +  A K      E A  A +
Sbjct: 39  ESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKA 98

Query: 130 APAARAPQALARASGRGGRVARRGAEESGPP 160
            P     Q  A      G  A + AE +  P
Sbjct: 99  EPPKAPEQEQAAPGPAAGGEAPKAAEAAAAP 129


>gi|239755394 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 31/147 (21%)

Query: 36  PAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP--- 92
           P P  GV+  G  GV L L                A   +  G  R+   GR+   P   
Sbjct: 16  PGPAQGVQRGGGAGVLLGL---------------TASAVQKPGLGRACKEGRQRKSPLRT 60

Query: 93  ---EEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRV 149
               + E+EEE++E+ G +      +PG   G A      A  AR+P   A  + +G   
Sbjct: 61  LRSNQEEQEEEEDEQNGRR-----HQPGRKQGRA-----QARPARSPLRPAATACKGDDR 110

Query: 150 ARRGAEESGPPHSPSRRGSASRAGPGR 176
             R     G P + SRR ++S    GR
Sbjct: 111 GERKKGRRGNPGTRSRRITSSLWASGR 137


>gi|239744215 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 31/147 (21%)

Query: 36  PAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP--- 92
           P P  GV+  G  GV L L                A   +  G  R+   GR+   P   
Sbjct: 16  PGPAQGVQRGGGAGVLLGL---------------TASAVQKPGLGRACKEGRQRKSPLRT 60

Query: 93  ---EEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRV 149
               + E+EEE++E+ G +      +PG   G A      A  AR+P   A  + +G   
Sbjct: 61  LRSNQEEQEEEEDEQNGRR-----HQPGRKQGRA-----QARPARSPLRPAATACKGDDR 110

Query: 150 ARRGAEESGPPHSPSRRGSASRAGPGR 176
             R     G P + SRR ++S    GR
Sbjct: 111 GERKKGRRGNPGTRSRRITSSLWASGR 137


>gi|9994187 platelet-derived growth factor C precursor [Homo
           sapiens]
          Length = 345

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 11/89 (12%)

Query: 232 CHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGG---CC--NDEGLECVPTEESNITMQI 286
           C P    V I +E     + IF P C+ + RCGG   CC  N    +CVP++ +    ++
Sbjct: 250 CTPRNFSVSIREELK-RTDTIFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEV 308

Query: 287 MRIKPHQG-----QHIGEMSFLQHNKCEC 310
           ++++P  G     + + +++   H +C+C
Sbjct: 309 LQLRPKTGVRGLHKSLTDVALEHHEECDC 337


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 17/122 (13%)

Query: 76   PSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARK--------PGSWTGEAAVC- 126
            P G+  + +SGR  P P +  E     E   P+  L  +         P +WT  A    
Sbjct: 1188 PVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSP 1247

Query: 127  -----ADSAPAARAPQALAR---ASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRAS 178
                 A+   +A+ P+ +A    +S    RV  +G E  G P +P     A    PG +S
Sbjct: 1248 PLPPPAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSS 1307

Query: 179  ET 180
            E+
Sbjct: 1308 ES 1309


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 48/182 (26%), Positives = 65/182 (35%), Gaps = 51/182 (28%)

Query: 17  LPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLF--------------------- 55
           L G +  V A  S+G+     P G +  +G RG+  +                       
Sbjct: 307 LEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPG 366

Query: 56  ----VQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRL 111
               + + G S F G     GEA P+GA      G E PQ + G        E GP   +
Sbjct: 367 PMGPLGIPGSSGFPGNPGMKGEAGPTGA-----RGPEGPQGQRG--------ETGPPGPV 413

Query: 112 GARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASR 171
           G+  PG      A+  D  P A+ P      SG  G         +GPP SP  +GS   
Sbjct: 414 GS--PGL---PGAIGTDGTPGAKGPTGSPGTSGPPG--------SAGPPGSPGPQGSTGP 460

Query: 172 AG 173
            G
Sbjct: 461 QG 462



 Score = 32.3 bits (72), Expect = 0.75
 Identities = 45/170 (26%), Positives = 57/170 (33%), Gaps = 30/170 (17%)

Query: 18   PGRRRTVDAAASRGQ-GPEPAPGG----GVEG-VGARGVALKLFVQLLGCSRFGGAVVRA 71
            PGR   V     RG  GP   PG     G  G VGA G A           + G    R 
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDA----------GQRGDPGSRG 1107

Query: 72   GEAEPSGAARSASSGREEPQPEEGEEEEEKEEER-------GPQWRLGARKPGSWTGEAA 124
                P  A +    G + P+ ++G+  +  +  +       G Q   G   P    G A 
Sbjct: 1108 PIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAG 1167

Query: 125  VCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
            +     P  R P      SG+ G          GP   P  RGS   AGP
Sbjct: 1168 IPGPFGP--RGPPGPVGPSGKEGNPG-----PLGPIGPPGVRGSVGEAGP 1210



 Score = 30.8 bits (68), Expect = 2.2
 Identities = 43/167 (25%), Positives = 55/167 (32%), Gaps = 37/167 (22%)

Query: 8   TAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGA 67
           TA +     LPG       A   G+  EP P G V   G+R                 G 
Sbjct: 790 TAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSR-----------------GN 832

Query: 68  VVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCA 127
               GE  P+GA   A  G + P  + G + E  E   G +   G+  P    G      
Sbjct: 833 PGSRGENGPTGAVGFA--GPQGPDGQPGVKGEPGEP--GQKGDAGSPGPQGLAG------ 882

Query: 128 DSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
             +P    P  +    G        G    GPP +    GSA R GP
Sbjct: 883 --SPGPHGPNGVPGLKG--------GRGTQGPPGATGFPGSAGRVGP 919


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,015,743
Number of Sequences: 37866
Number of extensions: 1070994
Number of successful extensions: 14737
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 504
Number of HSP's that attempted gapping in prelim test: 11400
Number of HSP's gapped (non-prelim): 2712
length of query: 389
length of database: 18,247,518
effective HSP length: 104
effective length of query: 285
effective length of database: 14,309,454
effective search space: 4078194390
effective search space used: 4078194390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.