PDGFA 36255

Name: PDGFA	Sequence: fasta or formatted (211aa)		NCBI GI: 77695917
Description: platelet-derived growth factor alpha isoform 1 preproprotein		Referenced in: Platelets and Megakaryocytes
Other entries for this name: alt prot [196aa] platelet-derived growth factor alpha isoform 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 13 1 C cysteine 4.7 10 2 D aspartate 3.3 7 1 E glutamate 9.5 20 2 F phenylalanine 0.5 1 1 G glycine 3.3 7 1 H histidine 3.8 8 2 I isoleucine 4.7 10 1 K lysine 8.1 17 2 L leucine 9.5 20 4 M methionine 0.5 1 1 N asparagine 1.4 3 1 P proline 6.6 14 2 Q glutamine 2.4 5 1 R arginine 11.4 24 2 S serine 7.1 15 2 T threonine 5.7 12 2 V valine 9.0 19 1 W tryptophan 0.5 1 1 Y tyrosine 1.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 platelet-derived growth factor alpha isoform 1 prepr... PDGFA 0.908 platelet-derived growth factor alpha isoform 2 prepr... PDGFB 0.302 platelet-derived growth factor beta isoform 1 preprop... PDGFB 0.282 platelet-derived growth factor beta isoform 2 prepro... PGF 0.069 placental growth factor, vascular endothelial growth... VEGFB 0.064 vascular endothelial growth factor B VEGFA 0.062 vascular endothelial growth factor A isoform c precu... VEGFA 0.054 vascular endothelial growth factor A isoform b precu... VEGFA 0.054 vascular endothelial growth factor A isoform a precu... FIGF 0.052 vascular endothelial growth factor D preproprotein [H... VEGFC 0.045 vascular endothelial growth factor C preproprotein [H... PDGFC 0.037 platelet-derived growth factor C precursor VEGFA 0.037 vascular endothelial growth factor A isoform f precu... VEGFA 0.035 vascular endothelial growth factor A isoform e precu... VEGFA 0.035 vascular endothelial growth factor A isoform d precu... VEGFA 0.035 vascular endothelial growth factor A isoform g precu... PDGFD 0.027 platelet derived growth factor D isoform 1 precursor... PDGFD 0.027 platelet derived growth factor D isoform 2 precursor... CXCL12 0.017 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... APC2 0.015 adenomatosis polyposis coli 2 C1orf68 0.012 skin-specific protein 32 TBCKL 0.010 TBC domain-containing protein kinase-like LOC100294088 0.007 PREDICTED: hypothetical protein, partial SPANXN3 0.007 SPANX-N3 protein NF2 0.007 neurofibromin 2 isoform 7 NF2 0.007 neurofibromin 2 isoform 2 NF2 0.007 neurofibromin 2 isoform 2 NF2 0.007 neurofibromin 2 isoform 7 NF2 0.007 neurofibromin 2 isoform 6 NF2 0.007 neurofibromin 2 isoform 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.