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Search of human proteins with 76781481
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|76781481 vascular endothelial growth factor A isoform b
precursor [Homo sapiens]
(395 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|76781481 vascular endothelial growth factor A isoform b precu... 829 0.0
gi|76781480 vascular endothelial growth factor A isoform a precu... 818 0.0
gi|76781482 vascular endothelial growth factor A isoform c precu... 809 0.0
gi|76781483 vascular endothelial growth factor A isoform d precu... 766 0.0
gi|76781487 vascular endothelial growth factor A isoform g precu... 751 0.0
gi|76781484 vascular endothelial growth factor A isoform e precu... 728 0.0
gi|76781485 vascular endothelial growth factor A isoform f precu... 669 0.0
gi|20149543 placental growth factor, vascular endothelial growth... 141 1e-33
gi|4507887 vascular endothelial growth factor B [Homo sapiens] 104 1e-22
gi|4885653 vascular endothelial growth factor C preproprotein [H... 77 3e-14
gi|4758378 vascular endothelial growth factor D preproprotein [H... 69 7e-12
gi|77695917 platelet-derived growth factor alpha isoform 1 prepr... 47 3e-05
gi|239757070 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239751580 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo ... 45 1e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 44 2e-04
gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens] 44 2e-04
gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens] 44 3e-04
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo... 44 3e-04
gi|15451786 platelet-derived growth factor beta isoform 2 prepro... 43 4e-04
gi|4505681 platelet-derived growth factor beta isoform 1 preprop... 43 4e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 4e-04
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 43 6e-04
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 43 6e-04
gi|30795231 brain abundant, membrane attached signal protein 1 [... 42 7e-04
gi|239755394 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239744215 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|9994187 platelet-derived growth factor C precursor [Homo sapi... 41 0.002
gi|112421108 capicua homolog [Homo sapiens] 40 0.004
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 39 0.006
>gi|76781481 vascular endothelial growth factor A isoform b
precursor [Homo sapiens]
Length = 395
Score = 829 bits (2142), Expect = 0.0
Identities = 395/395 (100%), Positives = 395/395 (100%)
Query: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
Query: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ 360
SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ
Sbjct: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ 360
Query: 361 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 395
DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 361 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 395
>gi|76781480 vascular endothelial growth factor A isoform a
precursor [Homo sapiens]
Length = 412
Score = 818 bits (2114), Expect = 0.0
Identities = 395/412 (95%), Positives = 395/412 (95%), Gaps = 17/412 (4%)
Query: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
Query: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSV--------------- 345
SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSV
Sbjct: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVYVGARCCLMPWSLPG 360
Query: 346 --PCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 395
PCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 361 PHPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 412
>gi|76781482 vascular endothelial growth factor A isoform c
precursor [Homo sapiens]
Length = 389
Score = 809 bits (2090), Expect = 0.0
Identities = 389/395 (98%), Positives = 389/395 (98%), Gaps = 6/395 (1%)
Query: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
Query: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ 360
SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSR PCGPCSERRKHLFVQ
Sbjct: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSR------PCGPCSERRKHLFVQ 354
Query: 361 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 395
DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 355 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 389
>gi|76781483 vascular endothelial growth factor A isoform d
precursor [Homo sapiens]
Length = 371
Score = 766 bits (1977), Expect = 0.0
Identities = 370/395 (93%), Positives = 370/395 (93%), Gaps = 24/395 (6%)
Query: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
Query: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ 360
SFLQHNKCECRPKKDRARQE PCGPCSERRKHLFVQ
Sbjct: 301 SFLQHNKCECRPKKDRARQEN------------------------PCGPCSERRKHLFVQ 336
Query: 361 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 395
DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
Sbjct: 337 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR 371
>gi|76781487 vascular endothelial growth factor A isoform g
precursor [Homo sapiens]
Length = 371
Score = 751 bits (1940), Expect = 0.0
Identities = 364/389 (93%), Positives = 364/389 (93%), Gaps = 24/389 (6%)
Query: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
Query: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ 360
SFLQHNKCECRPKKDRARQE PCGPCSERRKHLFVQ
Sbjct: 301 SFLQHNKCECRPKKDRARQEN------------------------PCGPCSERRKHLFVQ 336
Query: 361 DPQTCKCSCKNTDSRCKARQLELNERTCR 389
DPQTCKCSCKNTDSRCKARQLELNERTCR
Sbjct: 337 DPQTCKCSCKNTDSRCKARQLELNERTCR 365
>gi|76781484 vascular endothelial growth factor A isoform e
precursor [Homo sapiens]
Length = 354
Score = 728 bits (1878), Expect = 0.0
Identities = 352/377 (93%), Positives = 352/377 (93%), Gaps = 24/377 (6%)
Query: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
Query: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
Query: 301 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ 360
SFLQHNKCECRPKKDRARQE PCGPCSERRKHLFVQ
Sbjct: 301 SFLQHNKCECRPKKDRARQEN------------------------PCGPCSERRKHLFVQ 336
Query: 361 DPQTCKCSCKNTDSRCK 377
DPQTCKCSCKNTDSRCK
Sbjct: 337 DPQTCKCSCKNTDSRCK 353
>gi|76781485 vascular endothelial growth factor A isoform f
precursor [Homo sapiens]
Length = 327
Score = 669 bits (1725), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
Sbjct: 1 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG 60
Query: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
Sbjct: 61 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT 120
Query: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
Sbjct: 121 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET 180
Query: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
Sbjct: 181 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD 240
Query: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
Sbjct: 241 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM 300
Query: 301 SFLQHNKCECRPKKDRARQEK 321
SFLQHNKCECRPKKDRARQEK
Sbjct: 301 SFLQHNKCECRPKKDRARQEK 321
>gi|20149543 placental growth factor, vascular endothelial growth
factor-related protein [Homo sapiens]
Length = 170
Score = 141 bits (355), Expect = 1e-33
Identities = 64/146 (43%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 209 MAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCN 268
++ G G + EVV F +V+ RSYC +E LVD+ EYP E+E++F PSCV L+RC GCC
Sbjct: 29 LSAGNGSSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCG 88
Query: 269 DEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGKG 328
DE L CVP E +N+TMQ+++I+ E++F QH +CECRP +++ + E++ +G+G
Sbjct: 89 DENLHCVPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRG 148
Query: 329 KGQKRKRKKSRYKSWSVPCGPCSERR 354
KR+R+K R + CG RR
Sbjct: 149 ---KRRREKQRPTDCHL-CGDAVPRR 170
>gi|4507887 vascular endothelial growth factor B [Homo sapiens]
Length = 207
Score = 104 bits (260), Expect = 1e-22
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 192 LALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEY 251
LA LL L A+ + P A G + +VV ++DVY R+ C P E +V + E +
Sbjct: 10 LAALLQLAPAQAPVSQPDAPG---HQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAK 66
Query: 252 IFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECR 311
PSCV + RCGGCC D+GLECVPT + + MQI+ I+ + +GEMS +H++CECR
Sbjct: 67 QLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQILMIR-YPSSQLGEMSLEEHSQCECR 125
Query: 312 PKK 314
PKK
Sbjct: 126 PKK 128
>gi|4885653 vascular endothelial growth factor C preproprotein [Homo
sapiens]
Length = 419
Score = 77.0 bits (188), Expect = 3e-14
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 31/202 (15%)
Query: 219 EVVKFMD-VYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPT 277
E++K +D ++++ C P E +D+ +E+ FKP CV + RCGGCCN EGL+C+ T
Sbjct: 117 EILKSIDNEWRKTQCMPREVCIDVGKEFGVATNTFFKPPCVSVYRCGGCCNSEGLQCMNT 176
Query: 278 EESNITMQIMRIKP--HQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGK-----GKG 330
S ++ + I QG +SF H C C K D RQ +R +
Sbjct: 177 STSYLSKTLFEITVPLSQGPKPVTISFANHTSCRCMSKLDVYRQVHSIIRRSLPATLPQC 236
Query: 331 QKRKRKKSRYKSWSVPCGPCSERRKHLFVQ--------------------DPQTCKCSCK 370
Q + W+ C + +F D +TC+C C+
Sbjct: 237 QAANKTCPTNYMWNNHICRCLAQEDFMFSSDAGDDSTDGFHDICGPNKELDEETCQCVCR 296
Query: 371 N--TDSRCKARQLELNERTCRC 390
+ C + EL+ +C+C
Sbjct: 297 AGLRPASCGPHK-ELDRNSCQC 317
Score = 32.0 bits (71), Expect = 1.00
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 10/46 (21%)
Query: 347 CGPCSERRKHLFVQDPQTCKCSCKNT--DSRCKARQLELNERTCRC 390
CGP E D +C+C CKN S+C A + E +E TC+C
Sbjct: 304 CGPHKEL-------DRNSCQCVCKNKLFPSQCGANR-EFDENTCQC 341
>gi|4758378 vascular endothelial growth factor D preproprotein [Homo
sapiens]
Length = 354
Score = 68.9 bits (167), Expect = 7e-12
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 219 EVVKFMDV-YQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPT 277
E +K +D +QR+ C P ET V++ E FKP CV + RCGGCCN+E L C+ T
Sbjct: 97 ETLKVIDEEWQRTQCSPRETCVEVASELGKSTNTFFKPPCVNVFRCGGCCNEESLICMNT 156
Query: 278 EESNITMQIMRIKP--HQGQHIGEMSFLQHNKCECRPKKDRARQE--KKSVRGKGKGQKR 333
S I+ Q+ I + + H C+C P R ++S++ + +
Sbjct: 157 STSYISKQLFEISVPLTSVPELVPVKVANHTGCKCLPTAPRHPYSIIRRSIQIPEEDRCS 216
Query: 334 KRKK-----SRYKSWSVPC-----GPCSERRKHLFVQDPQTCKCSCKNTDSRCKA----- 378
KK + S C P + H +Q+P C + RC+
Sbjct: 217 HSKKLCPIDMLWDSNKCKCVLQEENPLAGTEDHSHLQEPALCGPHMMFDEDRCECVCKTP 276
Query: 379 --RQLELNERTCRC 390
+ L + + C C
Sbjct: 277 CPKDLIQHPKNCSC 290
>gi|77695917 platelet-derived growth factor alpha isoform 1
preproprotein [Homo sapiens]
Length = 211
Score = 47.0 bits (110), Expect = 3e-05
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 246 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRI-----KPHQGQHIGEM 300
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
Query: 301 SFLQHNKCECRPKK-DRARQEKKSVRGKGKGQKRKRKK 337
+H +C C + +E+ + R + G+KRKRK+
Sbjct: 170 RLEEHLECACATTSLNPDYREEDTGRPRESGKKRKRKR 207
>gi|239757070 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 69 VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
+R G+ E GA + + +++ E EE G Q + + PG+ +G A
Sbjct: 16 MRPGQGEGLGA---------DERRHHVQQQHEGHEEGGSQQQHRSAGPGARSGRAGAAGQ 66
Query: 129 SAPAARAPQALARASG--------RGGRVARRGAEESGPPHSPSRRGSASRAGPGR 176
A A + +RA+G R G R G EE P +P RRG ASR GR
Sbjct: 67 GAQGWAAARRESRAAGGRLECLGLRAG-AGRGGGEEEEPARAPPRRGGASRGRVGR 121
>gi|239751580 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 69 VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
+R G+ E GA + + +++ E EE G Q + + PG+ +G A
Sbjct: 16 MRPGQGEGLGA---------DERRHHVQQQHEGHEEGGSQQQHRSAGPGARSGRAGAAGQ 66
Query: 129 SAPAARAPQALARASG--------RGGRVARRGAEESGPPHSPSRRGSASRAGPGR 176
A A + +RA+G R G R G EE P +P RRG ASR GR
Sbjct: 67 GAQGWAAARRESRAAGGRLECLGLRAG-AGRGGGEEEEPARAPPRRGGASRGRVGR 121
>gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo
sapiens]
Length = 195
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 69 VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
+R G+ E GA + + +++ E EE G Q + + PG+ +G A
Sbjct: 16 MRPGQGEGLGA---------DERRHHVQQQHEGHEEGGSQQQHRSAGPGARSGRAGAAGQ 66
Query: 129 SAPAARAPQALARASG--------RGGRVARRGAEESGPPHSPSRRGSASRAGPGR 176
A A + +RA+G R G R G EE P +P RRG ASR GR
Sbjct: 67 GAQGWAAARRESRAAGGRLECLGLRAG-AGRGGGEEEEPARAPPRRGGASRGRVGR 121
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 44.3 bits (103), Expect = 2e-04
Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 21/173 (12%)
Query: 11 SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLF-VQLLGCSRFGGAVV 69
SP + PG+ RG+ P P G GA G A G F GAV
Sbjct: 291 SPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVG 350
Query: 70 RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADS 129
GEA P G G E PQ GE GP GA P G AD
Sbjct: 351 AKGEAGPQG-----PRGSEGPQGVRGEP--------GPPGPAGAAGPAGNPG-----ADG 392
Query: 130 APAARAPQALARASGRGGRVARRG-AEESGPPHSPSRRGSASRAG-PGRASET 180
P A+ +G G RG + GP P +G++ G PG +T
Sbjct: 393 QPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDT 445
Score = 43.9 bits (102), Expect = 3e-04
Identities = 52/169 (30%), Positives = 58/169 (34%), Gaps = 23/169 (13%)
Query: 25 DAAASRGQGPE--------PAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEP 76
DA A GP P P G V GA+G G + F GA R G P
Sbjct: 831 DAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP--GATGFPGAAGRVGPPGP 888
Query: 77 SGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEA-------AVCADS 129
SG A P P E + E GP R G P G A A
Sbjct: 889 SGNAGPPG----PPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAG 944
Query: 130 APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRAS 178
AP PQ +A G G +RG E G P P G + GP AS
Sbjct: 945 APGTPGPQGIAGQRGVVGLPGQRG--ERGFPGLPGPSGEPGKQGPSGAS 991
Score = 43.5 bits (101), Expect = 3e-04
Identities = 49/163 (30%), Positives = 59/163 (36%), Gaps = 13/163 (7%)
Query: 18 PGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPS 77
PGR + A RG+ P G GA G V G S G AG A P
Sbjct: 1024 PGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGP-----VGPAGKSGDRGETGPAGPAGPV 1078
Query: 78 G-AARSASSGREEPQPEEGEEEEEKEE----ERGPQWRLGARKPGSWTGEAAVCADSAPA 132
G +G + P+ ++GE E+ + RG G P GE S PA
Sbjct: 1079 GPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPA 1138
Query: 133 A-RAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
R P A A G+ G G GPP R G A GP
Sbjct: 1139 GPRGPPGSAGAPGKDGLNGLPG--PIGPPGPRGRTGDAGPVGP 1179
Score = 39.3 bits (90), Expect = 0.006
Identities = 47/171 (27%), Positives = 59/171 (34%), Gaps = 15/171 (8%)
Query: 11 SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVR 70
+P +PG R +G + P G G GV + +G GA
Sbjct: 723 APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGV--RGLTGPIGPPGPAGAPGD 780
Query: 71 AGEAEPSG-----AARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAV 125
GE+ PSG AR A R EP P GP G G+A
Sbjct: 781 KGESGPSGPAGPTGARGAPGDRGEPGPPG------PAGFAGPPGADGQPGAKGEPGDAGA 834
Query: 126 CADSAPAARA-PQALARASGRGGRVARRGAEES-GPPHSPSRRGSASRAGP 174
D+ P A P G G +GA S GPP + G+A R GP
Sbjct: 835 KGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGP 885
Score = 35.0 bits (79), Expect = 0.12
Identities = 46/180 (25%), Positives = 54/180 (30%), Gaps = 43/180 (23%)
Query: 19 GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
GR + + G P P G G G RG G R GE P G
Sbjct: 881 GRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGET--------------GPAGRPGEVGPPG 926
Query: 79 ----AARSASSGREEPQPEEGEEEEE-------------KEEERG------PQWRLGARK 115
A S G + P G + + ERG P G +
Sbjct: 927 PPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQG 986
Query: 116 PGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEES-GPPHSPSRRGSASRAGP 174
P +GE P P LA G GR GAE S G SP +G GP
Sbjct: 987 PSGASGERG-----PPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGP 1041
Score = 32.3 bits (72), Expect = 0.76
Identities = 33/105 (31%), Positives = 36/105 (34%), Gaps = 17/105 (16%)
Query: 70 RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADS 129
R G P GA R + P P+ E K ERG GA P GEA
Sbjct: 564 RPGPPGPPGA-RGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPP 622
Query: 130 APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
PA G RG E GP SP +G AGP
Sbjct: 623 GPA--------------GPAGERG--EQGPAGSPGFQGLPGPAGP 651
Score = 32.0 bits (71), Expect = 1.00
Identities = 41/152 (26%), Positives = 52/152 (34%), Gaps = 35/152 (23%)
Query: 33 GPEPAPGG-GVEGV-GARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEP 90
GP APG G +G+ G RGV G R P S G++ P
Sbjct: 941 GPAGAPGTPGPQGIAGQRGVV-------------GLPGQRGERGFPGLPGPSGEPGKQGP 987
Query: 91 QPEEGEEEEEKEEERGPQWRLG----ARKPGSWTGEAAVCADSAPAARAPQALARASGRG 146
GE RGP +G A PG E A A+ +P R G
Sbjct: 988 SGASGE--------RGPPGPMGPPGLAGPPGESGREGAPGAEGSPG--------RDGSPG 1031
Query: 147 GRVARRGAEESGPPHSPSRRGSASRAGPGRAS 178
+ R +GPP +P G+ GP S
Sbjct: 1032 AKGDRGETGPAGPPGAPGAPGAPGPVGPAGKS 1063
>gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]
Length = 598
Score = 44.3 bits (103), Expect = 2e-04
Identities = 39/140 (27%), Positives = 49/140 (35%), Gaps = 12/140 (8%)
Query: 33 GPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP 92
G + GGG G G G+ S G V++AG P AR E +
Sbjct: 35 GDQGKAGGGSPGWGCAGIP---------DSAPGAGVLQAGAVGP---ARGGQGAEEVGES 82
Query: 93 EEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARR 152
G EE + P RL RKP +GE + R + A G R
Sbjct: 83 AGGGEERRVRHPQAPALRLLNRKPQGGSGEIKTPENDLQRGRLSRGPRTAPPAPGMGDRS 142
Query: 153 GAEESGPPHSPSRRGSASRA 172
G +E PHSP S A
Sbjct: 143 GQQERSVPHSPGAPVGTSAA 162
>gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens]
Length = 1028
Score = 43.5 bits (101), Expect = 3e-04
Identities = 42/158 (26%), Positives = 55/158 (34%), Gaps = 18/158 (11%)
Query: 18 PGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPS 77
PG + A +G+ EP G G+ G + G + GE P
Sbjct: 358 PGPKGDPGAFGLKGEKGEPGADGEAGRPGSSGPS--------------GDEGQPGEPGPP 403
Query: 78 GAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQ 137
G A P P+ E ERGP+ G R P GEA D P
Sbjct: 404 GEKGEAGD-EGNPGPDGAPGERGGPGERGPRGTPGTRGPRGDPGEAGPQGDQ--GREGPV 460
Query: 138 ALARASGRGGRVARRGAE-ESGPPHSPSRRGSASRAGP 174
+ G G + +G + GPP S RG+ AGP
Sbjct: 461 GVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGPAGP 498
>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
motif, 19 preproprotein [Homo sapiens]
Length = 1207
Score = 43.5 bits (101), Expect = 3e-04
Identities = 56/177 (31%), Positives = 65/177 (36%), Gaps = 30/177 (16%)
Query: 20 RRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGA 79
RR VD A G +P G V GVG G A Q G SR +V EP
Sbjct: 44 RREPVDPAGGSGGSADP---GWVRGVGGGGSAR---AQAAGSSREVRSVAPVPLEEPV-E 96
Query: 80 ARSASSGREEPQPEEGEEEEEKEEERGPQWRLGAR--KPGSWTGEAAVCADSAPAARAPQ 137
RS S R P P EGEE+EE E + P+ GA PG+ P + P
Sbjct: 97 GRSESRLRPPP-PSEGEEDEELESQELPRGSSGAAALSPGAPASWQPPPPPQPPPSPPPA 155
Query: 138 ALARASG-------------------RGGR-VARRGAEESGPPHSPSRRGSASRAGP 174
A G R GR +A R A E P P G+AS P
Sbjct: 156 QHAEPDGDEVLLRIPAFSRDLYLLLRRDGRFLAPRFAVEQRPNPGPGPTGAASAPQP 212
>gi|15451786 platelet-derived growth factor beta isoform 2
preproprotein [Homo sapiens]
Length = 226
Score = 43.1 bits (100), Expect = 4e-04
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 251 YIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHI---GEMSFLQHNK 307
++ P CV + RC GCCN+ ++C PT+ +Q+ +I+ + + I ++ H
Sbjct: 103 FLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLA 162
Query: 308 CECRPKKDRARQEKKSVRGKGKGQKRKRK 336
C+C + + R G Q+++ K
Sbjct: 163 CKC----ETVAAARPVTRSPGGSQEQRAK 187
>gi|4505681 platelet-derived growth factor beta isoform 1
preproprotein [Homo sapiens]
Length = 241
Score = 43.1 bits (100), Expect = 4e-04
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 251 YIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHI---GEMSFLQHNK 307
++ P CV + RC GCCN+ ++C PT+ +Q+ +I+ + + I ++ H
Sbjct: 118 FLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLA 177
Query: 308 CECRPKKDRARQEKKSVRGKGKGQKRKRK 336
C+C + + R G Q+++ K
Sbjct: 178 CKC----ETVAAARPVTRSPGGSQEQRAK 202
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.1 bits (100), Expect = 4e-04
Identities = 56/196 (28%), Positives = 68/196 (34%), Gaps = 23/196 (11%)
Query: 9 APSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAV 68
A + +H L R V AAA+ G G GA A GA
Sbjct: 35 ASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPA-----------EGAP 83
Query: 69 VRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCAD 128
A E P+G AR G + P P P +L GS A V A
Sbjct: 84 GAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAA 143
Query: 129 SAPAA---RAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASETMNFLL 185
+A AA AP A+ +G AR G P G AGPG A++T+N
Sbjct: 144 AAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG-AAQTLN--- 199
Query: 186 SWVHWSLALLLYLHHA 201
A LL HHA
Sbjct: 200 -----GSAALLNSHHA 210
Score = 31.2 bits (69), Expect = 1.7
Identities = 43/155 (27%), Positives = 56/155 (36%), Gaps = 21/155 (13%)
Query: 24 VDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPS--GAAR 81
V AAA+ GPEPAP G + G +A + G G G +P+ GAA+
Sbjct: 140 VPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP---GPGPGPGPGPGPGPGKPAGPGAAQ 196
Query: 82 SASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGS---------WTGEA---AVCADS 129
+ + GP L KP + + G A A A S
Sbjct: 197 TLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPS 256
Query: 130 APAARAPQALARA----SGRGGRVARRGAEESGPP 160
PAA AP A A A +AR +GPP
Sbjct: 257 PPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 42.7 bits (99), Expect = 6e-04
Identities = 58/200 (29%), Positives = 72/200 (36%), Gaps = 34/200 (17%)
Query: 12 PSYHLLPGRRRTVDAAASRG-------QGPEPAPGG----GVEG-------VGARGVALK 53
P +PG R A +G +GPE APG G+ G GA G +
Sbjct: 746 PGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGE 805
Query: 54 LFVQ-LLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP----EEGEEEEEKEEER-GP 107
+ G + GA GE P G A A + QP E+GE ++ + GP
Sbjct: 806 VGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGP 865
Query: 108 QWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAE-ESGPPHSPSRR 166
Q GA P TG A A+ P G GRV G+ GPP P
Sbjct: 866 QGPSGAPGPQGPTGVTG--PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPS 923
Query: 167 GSASRAG-------PGRASE 179
G G PGRA E
Sbjct: 924 GKDGPKGARGDSGPPGRAGE 943
Score = 37.7 bits (86), Expect = 0.018
Identities = 47/170 (27%), Positives = 59/170 (34%), Gaps = 13/170 (7%)
Query: 11 SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARG-VALKLFVQLLGCSRFGGAVV 69
+P +PG + + A G P P G GA G + K G + F G
Sbjct: 409 NPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQG 468
Query: 70 RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEER----GPQWRLGARKPGSWTGEAAV 125
GE P+G G P EEG+ E GP GA + G+ +
Sbjct: 469 PKGEPGPAGP-----QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGL 523
Query: 126 CADS-APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
AP R P LA G G R G E G P + G AGP
Sbjct: 524 AGPKGAPGERGPSGLAGPKGANGDPGRPG--EPGLPGARGLTGRPGDAGP 571
Score = 35.8 bits (81), Expect = 0.069
Identities = 45/165 (27%), Positives = 51/165 (30%), Gaps = 22/165 (13%)
Query: 19 GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
GR AA +RG +P P G VG G F GA GEA P+G
Sbjct: 333 GRTGPAGAAGARGNDGQPGPAGPPGPVGP-----------AGGPGFPGAPGAKGEAGPTG 381
Query: 79 A--ARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAP 136
A A R EP G GA+ GS A P R P
Sbjct: 382 ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAK--GSAGAPGIAGAPGFPGPRGP 439
Query: 137 QALARASGRGGRVARRGAE-------ESGPPHSPSRRGSASRAGP 174
A+G G + G E GP P G GP
Sbjct: 440 PGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGP 484
Score = 35.0 bits (79), Expect = 0.12
Identities = 51/196 (26%), Positives = 69/196 (35%), Gaps = 38/196 (19%)
Query: 9 APSPSYHLLPGRRRTVDAAASRG----QGPE--------PAPGG-----GVEGV-GARGV 50
A P + PG + +RG QGP P P G G +G+ GA+G
Sbjct: 362 AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGS 421
Query: 51 ALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEE-------EEEKEE 103
A G GA G P G ++G P+ + GE E+ +
Sbjct: 422 A--------GAPGIAGAPGFPGPRGPPGP--QGATGPLGPKGQTGEPGIAGFKGEQGPKG 471
Query: 104 ERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEE-SGPPHS 162
E GP GA P G+ A P P G G G + +GP +
Sbjct: 472 EPGPAGPQGAPGPAGEEGKRG--ARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGA 529
Query: 163 PSRRGSASRAGPGRAS 178
P RG + AGP A+
Sbjct: 530 PGERGPSGLAGPKGAN 545
Score = 33.9 bits (76), Expect = 0.26
Identities = 47/194 (24%), Positives = 61/194 (31%), Gaps = 51/194 (26%)
Query: 25 DAAASRGQGPEPAPGG----GVEGV-GARGVALKLFVQLLGCSRFGGAVVRAG----EAE 75
DA A QGP APG GV G GARG G + F GA R G
Sbjct: 859 DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP-----GATGFPGAAGRVGPPGSNGN 913
Query: 76 PSGAARSASSGREEPQPEEGEE-------------------EEEKEEERGPQWRLGARKP 116
P SG++ P+ G+ E+ + + GP G P
Sbjct: 914 PGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGP 973
Query: 117 GSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEES----------------GPP 160
G+ + P R + G G ++GA + GP
Sbjct: 974 QGLAGQRGIVG--LPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPA 1031
Query: 161 HSPSRRGSASRAGP 174
P R GS GP
Sbjct: 1032 GEPGREGSPGADGP 1045
Score = 33.1 bits (74), Expect = 0.45
Identities = 43/175 (24%), Positives = 57/175 (32%), Gaps = 34/175 (19%)
Query: 19 GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
G V A + G P P G G RG A GA G + P+G
Sbjct: 1059 GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEA--------------GAQGPMGPSGPAG 1104
Query: 79 AARSASSGREEPQPEEGEEEEEKEE----ERGPQWRLGARKPGSWTGEAAVCADSAPAA- 133
A G + P+ ++GE E E RG G P +G+ + P+
Sbjct: 1105 AR--GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGP 1162
Query: 134 RAPQALARASGRGGRVARRG-------------AEESGPPHSPSRRGSASRAGPG 175
R P SG+ G G +GPP +P G GPG
Sbjct: 1163 RGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPG 1217
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 42.7 bits (99), Expect = 6e-04
Identities = 58/200 (29%), Positives = 72/200 (36%), Gaps = 34/200 (17%)
Query: 12 PSYHLLPGRRRTVDAAASRG-------QGPEPAPGG----GVEG-------VGARGVALK 53
P +PG R A +G +GPE APG G+ G GA G +
Sbjct: 677 PGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGE 736
Query: 54 LFVQ-LLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP----EEGEEEEEKEEER-GP 107
+ G + GA GE P G A A + QP E+GE ++ + GP
Sbjct: 737 VGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGP 796
Query: 108 QWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAE-ESGPPHSPSRR 166
Q GA P TG A A+ P G GRV G+ GPP P
Sbjct: 797 QGPSGAPGPQGPTGVTG--PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPS 854
Query: 167 GSASRAG-------PGRASE 179
G G PGRA E
Sbjct: 855 GKDGPKGARGDSGPPGRAGE 874
Score = 37.7 bits (86), Expect = 0.018
Identities = 47/170 (27%), Positives = 59/170 (34%), Gaps = 13/170 (7%)
Query: 11 SPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARG-VALKLFVQLLGCSRFGGAVV 69
+P +PG + + A G P P G GA G + K G + F G
Sbjct: 340 NPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQG 399
Query: 70 RAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEER----GPQWRLGARKPGSWTGEAAV 125
GE P+G G P EEG+ E GP GA + G+ +
Sbjct: 400 PKGEPGPAGP-----QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGL 454
Query: 126 CADS-APAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
AP R P LA G G R G E G P + G AGP
Sbjct: 455 AGPKGAPGERGPSGLAGPKGANGDPGRPG--EPGLPGARGLTGRPGDAGP 502
Score = 35.8 bits (81), Expect = 0.069
Identities = 45/165 (27%), Positives = 51/165 (30%), Gaps = 22/165 (13%)
Query: 19 GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
GR AA +RG +P P G VG G F GA GEA P+G
Sbjct: 264 GRTGPAGAAGARGNDGQPGPAGPPGPVGP-----------AGGPGFPGAPGAKGEAGPTG 312
Query: 79 A--ARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAP 136
A A R EP G GA+ GS A P R P
Sbjct: 313 ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAK--GSAGAPGIAGAPGFPGPRGP 370
Query: 137 QALARASGRGGRVARRGAE-------ESGPPHSPSRRGSASRAGP 174
A+G G + G E GP P G GP
Sbjct: 371 PGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGP 415
Score = 35.0 bits (79), Expect = 0.12
Identities = 51/196 (26%), Positives = 69/196 (35%), Gaps = 38/196 (19%)
Query: 9 APSPSYHLLPGRRRTVDAAASRG----QGPE--------PAPGG-----GVEGV-GARGV 50
A P + PG + +RG QGP P P G G +G+ GA+G
Sbjct: 293 AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGS 352
Query: 51 ALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEE-------EEEKEE 103
A G GA G P G ++G P+ + GE E+ +
Sbjct: 353 A--------GAPGIAGAPGFPGPRGPPGP--QGATGPLGPKGQTGEPGIAGFKGEQGPKG 402
Query: 104 ERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEE-SGPPHS 162
E GP GA P G+ A P P G G G + +GP +
Sbjct: 403 EPGPAGPQGAPGPAGEEGKRG--ARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGA 460
Query: 163 PSRRGSASRAGPGRAS 178
P RG + AGP A+
Sbjct: 461 PGERGPSGLAGPKGAN 476
Score = 33.9 bits (76), Expect = 0.26
Identities = 47/194 (24%), Positives = 61/194 (31%), Gaps = 51/194 (26%)
Query: 25 DAAASRGQGPEPAPGG----GVEGV-GARGVALKLFVQLLGCSRFGGAVVRAG----EAE 75
DA A QGP APG GV G GARG G + F GA R G
Sbjct: 790 DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPP-----GATGFPGAAGRVGPPGSNGN 844
Query: 76 PSGAARSASSGREEPQPEEGEE-------------------EEEKEEERGPQWRLGARKP 116
P SG++ P+ G+ E+ + + GP G P
Sbjct: 845 PGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGP 904
Query: 117 GSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEES----------------GPP 160
G+ + P R + G G ++GA + GP
Sbjct: 905 QGLAGQRGIVG--LPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPA 962
Query: 161 HSPSRRGSASRAGP 174
P R GS GP
Sbjct: 963 GEPGREGSPGADGP 976
Score = 33.1 bits (74), Expect = 0.45
Identities = 43/175 (24%), Positives = 57/175 (32%), Gaps = 34/175 (19%)
Query: 19 GRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSG 78
G V A + G P P G G RG A GA G + P+G
Sbjct: 990 GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEA--------------GAQGPMGPSGPAG 1035
Query: 79 AARSASSGREEPQPEEGEEEEEKEE----ERGPQWRLGARKPGSWTGEAAVCADSAPAA- 133
A G + P+ ++GE E E RG G P +G+ + P+
Sbjct: 1036 AR--GIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGP 1093
Query: 134 RAPQALARASGRGGRVARRG-------------AEESGPPHSPSRRGSASRAGPG 175
R P SG+ G G +GPP +P G GPG
Sbjct: 1094 RGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPG 1148
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 42.4 bits (98), Expect = 7e-04
Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 25 DAAASRGQGP--EPAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARS 82
DAAA++ + P EP G A Q GG +A EA + A +
Sbjct: 74 DAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESA 133
Query: 83 ASSGREEPQPEEGEEEEEK-------EEERGPQWRLGARKPGSWTGEAAVCADSAPAA-R 134
A + EEP EEGE ++ + +E + KPGS EAA + PAA
Sbjct: 134 APAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGS--SEAAPSSKETPAATE 191
Query: 135 APQALARASGRGGRVARRGAEESGPPHSPS 164
AP + +A G AEE P +P+
Sbjct: 192 APSSTPKAQGPAA-----SAEEPKPVEAPA 216
Score = 34.7 bits (78), Expect = 0.15
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 72 GEAEPSGAARSASSGRE-----EPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVC 126
G+AE + A++ +E EP+ EG E + E + P+ A P + GEA
Sbjct: 64 GKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAA-GGEAPKA 122
Query: 127 ADSAPA---ARAPQALARASGRGGR---------VARRGAEESGPPHSPSRRGSASRA 172
A++A A + AP A S G A + + G P S S+ GS+ A
Sbjct: 123 AEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAA 180
Score = 33.5 bits (75), Expect = 0.34
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 73 EAEPSGAAR--SASSGREEP-QPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADS 129
E+EP AA A G+E+P Q EG+ EE++ E+ + A K E A A +
Sbjct: 39 ESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKA 98
Query: 130 APAARAPQALARASGRGGRVARRGAEESGPP 160
P Q A G A + AE + P
Sbjct: 99 EPPKAPEQEQAAPGPAAGGEAPKAAEAAAAP 129
>gi|239755394 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 31/147 (21%)
Query: 36 PAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP--- 92
P P GV+ G GV L L A + G R+ GR+ P
Sbjct: 16 PGPAQGVQRGGGAGVLLGL---------------TASAVQKPGLGRACKEGRQRKSPLRT 60
Query: 93 ---EEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRV 149
+ E+EEE++E+ G + +PG G A A AR+P A + +G
Sbjct: 61 LRSNQEEQEEEEDEQNGRR-----HQPGRKQGRA-----QARPARSPLRPAATACKGDDR 110
Query: 150 ARRGAEESGPPHSPSRRGSASRAGPGR 176
R G P + SRR ++S GR
Sbjct: 111 GERKKGRRGNPGTRSRRITSSLWASGR 137
>gi|239744215 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 31/147 (21%)
Query: 36 PAPGGGVEGVGARGVALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQP--- 92
P P GV+ G GV L L A + G R+ GR+ P
Sbjct: 16 PGPAQGVQRGGGAGVLLGL---------------TASAVQKPGLGRACKEGRQRKSPLRT 60
Query: 93 ---EEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRV 149
+ E+EEE++E+ G + +PG G A A AR+P A + +G
Sbjct: 61 LRSNQEEQEEEEDEQNGRR-----HQPGRKQGRA-----QARPARSPLRPAATACKGDDR 110
Query: 150 ARRGAEESGPPHSPSRRGSASRAGPGR 176
R G P + SRR ++S GR
Sbjct: 111 GERKKGRRGNPGTRSRRITSSLWASGR 137
>gi|9994187 platelet-derived growth factor C precursor [Homo
sapiens]
Length = 345
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 232 CHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGG---CC--NDEGLECVPTEESNITMQI 286
C P V I +E + IF P C+ + RCGG CC N +CVP++ + ++
Sbjct: 250 CTPRNFSVSIREELK-RTDTIFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEV 308
Query: 287 MRIKPHQG-----QHIGEMSFLQHNKCEC 310
++++P G + + +++ H +C+C
Sbjct: 309 LQLRPKTGVRGLHKSLTDVALEHHEECDC 337
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 40.0 bits (92), Expect = 0.004
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 17/122 (13%)
Query: 76 PSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARK--------PGSWTGEAAVC- 126
P G+ + +SGR P P + E E P+ L + P +WT A
Sbjct: 1188 PVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSP 1247
Query: 127 -----ADSAPAARAPQALAR---ASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRAS 178
A+ +A+ P+ +A +S RV +G E G P +P A PG +S
Sbjct: 1248 PLPPPAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSS 1307
Query: 179 ET 180
E+
Sbjct: 1308 ES 1309
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 39.3 bits (90), Expect = 0.006
Identities = 48/182 (26%), Positives = 65/182 (35%), Gaps = 51/182 (28%)
Query: 17 LPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLF--------------------- 55
L G + V A S+G+ P G + +G RG+ +
Sbjct: 307 LEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPG 366
Query: 56 ----VQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRL 111
+ + G S F G GEA P+GA G E PQ + G E GP +
Sbjct: 367 PMGPLGIPGSSGFPGNPGMKGEAGPTGA-----RGPEGPQGQRG--------ETGPPGPV 413
Query: 112 GARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASR 171
G+ PG A+ D P A+ P SG G +GPP SP +GS
Sbjct: 414 GS--PGL---PGAIGTDGTPGAKGPTGSPGTSGPPG--------SAGPPGSPGPQGSTGP 460
Query: 172 AG 173
G
Sbjct: 461 QG 462
Score = 32.3 bits (72), Expect = 0.76
Identities = 45/170 (26%), Positives = 57/170 (33%), Gaps = 30/170 (17%)
Query: 18 PGRRRTVDAAASRGQ-GPEPAPGG----GVEG-VGARGVALKLFVQLLGCSRFGGAVVRA 71
PGR V RG GP PG G G VGA G A + G R
Sbjct: 1058 PGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDA----------GQRGDPGSRG 1107
Query: 72 GEAEPSGAARSASSGREEPQPEEGEEEEEKEEER-------GPQWRLGARKPGSWTGEAA 124
P A + G + P+ ++G+ + + + G Q G P G A
Sbjct: 1108 PIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAG 1167
Query: 125 VCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
+ P R P SG+ G GP P RGS AGP
Sbjct: 1168 IPGPFGP--RGPPGPVGPSGKEGNPG-----PLGPIGPPGVRGSVGEAGP 1210
Score = 30.8 bits (68), Expect = 2.2
Identities = 43/167 (25%), Positives = 55/167 (32%), Gaps = 37/167 (22%)
Query: 8 TAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLGCSRFGGA 67
TA + LPG A G+ EP P G V G+R G
Sbjct: 790 TAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSR-----------------GN 832
Query: 68 VVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWTGEAAVCA 127
GE P+GA A G + P + G + E E G + G+ P G
Sbjct: 833 PGSRGENGPTGAVGFA--GPQGPDGQPGVKGEPGEP--GQKGDAGSPGPQGLAG------ 882
Query: 128 DSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGP 174
+P P + G G GPP + GSA R GP
Sbjct: 883 --SPGPHGPNGVPGLKG--------GRGTQGPPGATGFPGSAGRVGP 919
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,348,822
Number of Sequences: 37866
Number of extensions: 1088227
Number of successful extensions: 14757
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 505
Number of HSP's that attempted gapping in prelim test: 11425
Number of HSP's gapped (non-prelim): 2705
length of query: 395
length of database: 18,247,518
effective HSP length: 104
effective length of query: 291
effective length of database: 14,309,454
effective search space: 4164051114
effective search space used: 4164051114
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.