ATG4C 25226

Name: ATG4C	Sequence: fasta or formatted (458aa)		NCBI GI: 30410844
Description: APG4 autophagy 4 homolog C isoform 7		Referenced in: Additional Membrane Functions
Other entries for this name: alt mRNA [458aa] APG4 autophagy 4 homolog C isoform 8
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 22 1 C cysteine 2.2 10 1 D aspartate 7.0 32 2 E glutamate 7.6 35 2 F phenylalanine 6.1 28 1 G glycine 6.1 28 2 H histidine 2.6 12 1 I isoleucine 5.7 26 2 K lysine 8.3 38 2 L leucine 7.9 36 3 M methionine 2.0 9 1 N asparagine 2.8 13 2 P proline 3.5 16 1 Q glutamine 2.6 12 1 R arginine 3.9 18 1 S serine 8.3 38 2 T threonine 7.2 33 3 V valine 5.0 23 2 W tryptophan 2.0 9 1 Y tyrosine 4.4 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 APG4 autophagy 4 homolog C isoform 7 ATG4C 1.000 APG4 autophagy 4 homolog C isoform 8 ATG4D 0.416 APG4 autophagy 4 homolog D ATG4A 0.168 autophagy-related cysteine endopeptidase 2 isoform a... ATG4B 0.148 APG4 autophagy 4 homolog B isoform b ATG4B 0.148 APG4 autophagy 4 homolog B isoform a ATG4A 0.117 autophagy-related cysteine endopeptidase 2 isoform b... GCDH 0.008 glutaryl-Coenzyme A dehydrogenase isoform a precursor... GCDH 0.008 glutaryl-Coenzyme A dehydrogenase isoform b precursor... ZFR 0.005 zinc finger RNA binding protein PPFIA1 0.004 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.004 PTPRF interacting protein alpha 1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.