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Search of human proteins with 7662112
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo
sapiens]
(598 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens] 1218 0.0
gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens] 1213 0.0
gi|23510352 MIF4G domain containing [Homo sapiens] 97 5e-20
gi|34452730 poly(A) binding protein interacting protein 1 isofor... 75 2e-13
gi|33386693 poly(A) binding protein interacting protein 1 isofor... 75 2e-13
gi|17511255 poly(A) binding protein interacting protein 1 isofor... 75 2e-13
gi|169212085 PREDICTED: similar to poly(A) binding protein inter... 73 7e-13
gi|239752553 PREDICTED: similar to poly(A) binding protein inter... 73 7e-13
gi|89041275 PREDICTED: similar to poly(A) binding protein intera... 73 7e-13
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 52 2e-06
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 52 2e-06
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ... 52 2e-06
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 52 2e-06
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ... 52 2e-06
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 43 7e-04
gi|110630018 eukaryotic translation initiation factor 4 gamma, 2... 41 0.004
gi|4503539 eukaryotic translation initiation factor 4 gamma, 2 i... 41 0.004
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 37 0.040
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 37 0.052
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 37 0.052
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi... 37 0.068
gi|59938776 cAMP responsive element binding protein 5 isoform de... 36 0.088
gi|59938774 cAMP responsive element binding protein 5 isoform be... 36 0.088
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 36 0.088
gi|59938770 cAMP responsive element binding protein 5 isoform al... 36 0.088
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 36 0.12
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 35 0.15
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 35 0.20
gi|55956923 5-hydroxytryptamine (serotonin) receptor 1A [Homo sa... 35 0.26
gi|217416374 hypothetical protein LOC92749 [Homo sapiens] 35 0.26
>gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]
Length = 598
Score = 1218 bits (3152), Expect = 0.0
Identities = 598/598 (100%), Positives = 598/598 (100%)
Query: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ
Sbjct: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
Query: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL
Sbjct: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
Query: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI
Sbjct: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
Query: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT
Sbjct: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
Query: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP
Sbjct: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
Query: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKDEV 360
DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKDEV
Sbjct: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKDEV 360
Query: 361 AVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQK 420
AVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQK
Sbjct: 361 AVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQK 420
Query: 421 AVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFITF 480
AVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFITF
Sbjct: 421 AVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFITF 480
Query: 481 LCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLP 540
LCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLP
Sbjct: 481 LCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLP 540
Query: 541 EMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 598
EMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA
Sbjct: 541 EMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 598
>gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens]
Length = 600
Score = 1213 bits (3139), Expect = 0.0
Identities = 598/600 (99%), Positives = 598/600 (99%), Gaps = 2/600 (0%)
Query: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ
Sbjct: 1 MENSSAASASSEAGSSRSQEIEELERFIDSYVLEYQVQGLLADKTEGDGESERTQSHISQ 60
Query: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL
Sbjct: 61 WTADCSEPLDSSCSFSRGRAPPQQNGSKDNSLDMLGTDIWAANTFDSFSGATWDLQPEKL 120
Query: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI
Sbjct: 121 DFTQFHRKVRHTPKQPLPHIDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEI 180
Query: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT
Sbjct: 181 AHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPT 240
Query: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP
Sbjct: 241 HHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSP 300
Query: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEK--D 358
DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEK D
Sbjct: 301 DTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKVPD 360
Query: 359 EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY 418
EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY
Sbjct: 361 EVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIY 420
Query: 419 QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI 478
QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI
Sbjct: 421 QKAVSDRSFAFTAAKLCDKMALFMVEGTKFRSLLLNMLQKDFTVREELQQQDVERWLGFI 480
Query: 479 TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ 538
TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ
Sbjct: 481 TFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQ 540
Query: 539 LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 598
LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA
Sbjct: 541 LPEMMTELLASARDKMLCPSESMLTRSLLLEVIELHANSWNPLTPPITQYYNRTIQKLTA 600
>gi|23510352 MIF4G domain containing [Homo sapiens]
Length = 256
Score = 96.7 bits (239), Expect = 5e-20
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 410 LGEIVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-----FRSLLLNMLQKDFTVRE 464
L ++ I ++ D F+ A ++C A+ E + FR LLN LQ+++ RE
Sbjct: 68 LEKVANVIVDHSLQDCVFSKEAGRMC--YAIIQAESKQAGQSVFRRGLLNRLQQEYQARE 125
Query: 465 ELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRVLVCPIYTCLRELLQSQDV-KEDAVLC 523
+L+ + ++ W+ ++TF+C +F +R + P LV P+Y CL L Q + KE+ V C
Sbjct: 126 QLRARSLQGWVCYVTFICNIFDYLRVN-NMPMMALVNPVYDCLFRLAQPDSLSKEEEVDC 184
Query: 524 CSMELQSTGRLLEEQLPEMMTELLASARDKMLCPSE-SMLTRSLLLEVIELHANSWNPLT 582
++L G LE+ + M EL RD L P+ S L + LLLE+IE A W T
Sbjct: 185 LVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGWK-TT 243
Query: 583 PPITQYY 589
P +YY
Sbjct: 244 PAAHKYY 250
>gi|34452730 poly(A) binding protein interacting protein 1 isoform 3
[Homo sapiens]
Length = 367
Score = 75.1 bits (183), Expect = 2e-13
Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)
Query: 377 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 436
+ LN + +T++ F E +++ L E+V IYQ+A S +F++ A+LC+
Sbjct: 52 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 111
Query: 437 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 488
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 112 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 171
Query: 489 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 542
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 172 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 229
Query: 543 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 578
M E++ + +L + S + +LL+++EL +++W
Sbjct: 230 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 265
>gi|33386693 poly(A) binding protein interacting protein 1 isoform 2
[Homo sapiens]
Length = 400
Score = 75.1 bits (183), Expect = 2e-13
Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)
Query: 377 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 436
+ LN + +T++ F E +++ L E+V IYQ+A S +F++ A+LC+
Sbjct: 85 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 144
Query: 437 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 488
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 145 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 204
Query: 489 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 542
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 205 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 262
Query: 543 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 578
M E++ + +L + S + +LL+++EL +++W
Sbjct: 263 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 298
>gi|17511255 poly(A) binding protein interacting protein 1 isoform 1
[Homo sapiens]
Length = 479
Score = 75.1 bits (183), Expect = 2e-13
Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)
Query: 377 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 436
+ LN + +T++ F E +++ L E+V IYQ+A S +F++ A+LC+
Sbjct: 164 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 223
Query: 437 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 488
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 224 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 283
Query: 489 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 542
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 284 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 341
Query: 543 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 578
M E++ + +L + S + +LL+++EL +++W
Sbjct: 342 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 377
>gi|169212085 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 516
Score = 73.2 bits (178), Expect = 7e-13
Identities = 52/216 (24%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 377 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 436
+ LN + +T++ F E +++ L E+ IYQ+A S +F++ A+LC+
Sbjct: 201 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELAELIYQQATSIPNFSYMGARLCN 260
Query: 437 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 488
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 261 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVFFLGELYLNLEI 320
Query: 489 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 542
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 321 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 378
Query: 543 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 578
M E++ + +L + S + +LL+++EL +++W
Sbjct: 379 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 414
>gi|239752553 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 457
Score = 73.2 bits (178), Expect = 7e-13
Identities = 52/216 (24%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 377 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 436
+ LN + +T++ F E +++ L E+ IYQ+A S +F++ A+LC+
Sbjct: 142 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELAELIYQQATSIPNFSYMGARLCN 201
Query: 437 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 488
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 202 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVFFLGELYLNLEI 261
Query: 489 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 542
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 262 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 319
Query: 543 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 578
M E++ + +L + S + +LL+++EL +++W
Sbjct: 320 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 355
>gi|89041275 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 488
Score = 73.2 bits (178), Expect = 7e-13
Identities = 52/216 (24%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 377 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 436
+ LN + +T++ F E +++ L E+ IYQ+A S +F++ A+LC+
Sbjct: 173 DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELAELIYQQATSIPNFSYMGARLCN 232
Query: 437 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 488
++ + + FR LLL + ++ V+++ + D +R+ F+ FL E++ +
Sbjct: 233 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVFFLGELYLNLEI 292
Query: 489 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 542
+ + G+ R + + LRELL + + +D ++C L+ TG +LE+ E
Sbjct: 293 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 350
Query: 543 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 578
M E++ + +L + S + +LL+++EL +++W
Sbjct: 351 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 386
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 51.6 bits (122), Expect = 2e-06
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 66/327 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 691 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 741
Query: 354 LKEKDEVAVETT-TPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGE 412
+KD + + Q+ ++ ILN + K T Q + ++EE L
Sbjct: 742 AADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLKG 796
Query: 413 IVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF----- 460
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 797 VIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKD 856
Query: 461 ----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGEP 495
++EEL++ +D+ R LG I F+ E+F
Sbjct: 857 DDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF---------K 907
Query: 496 FRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDKM 554
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K+
Sbjct: 908 LKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKI 965
Query: 555 LCPSE-SMLTRSLLLEVIELHANSWNP 580
+ + S R +L +V++L ++W P
Sbjct: 966 IKEKKTSSRIRFMLQDVLDLRGSNWVP 992
>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
isoform 2 [Homo sapiens]
Length = 1512
Score = 51.6 bits (122), Expect = 2e-06
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 66/327 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 604 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 654
Query: 354 LKEKDEVAVETT-TPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGE 412
+KD + + Q+ ++ ILN + K T Q + ++EE L
Sbjct: 655 AADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLKG 709
Query: 413 IVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF----- 460
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 710 VIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKD 769
Query: 461 ----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGEP 495
++EEL++ +D+ R LG I F+ E+F
Sbjct: 770 DDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF---------K 820
Query: 496 FRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDKM 554
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K+
Sbjct: 821 LKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKI 878
Query: 555 LCPSE-SMLTRSLLLEVIELHANSWNP 580
+ + S R +L +V++L ++W P
Sbjct: 879 IKEKKTSSRIRFMLQDVLDLRGSNWVP 905
>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
isoform 3 [Homo sapiens]
Length = 1435
Score = 51.6 bits (122), Expect = 2e-06
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 66/327 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 527 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 577
Query: 354 LKEKDEVAVETT-TPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGE 412
+KD + + Q+ ++ ILN + K T Q + ++EE L
Sbjct: 578 AADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLKG 632
Query: 413 IVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF----- 460
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 633 VIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKD 692
Query: 461 ----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGEP 495
++EEL++ +D+ R LG I F+ E+F
Sbjct: 693 DDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF---------K 743
Query: 496 FRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDKM 554
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K+
Sbjct: 744 LKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKI 801
Query: 555 LCPSE-SMLTRSLLLEVIELHANSWNP 580
+ + S R +L +V++L ++W P
Sbjct: 802 IKEKKTSSRIRFMLQDVLDLRGSNWVP 828
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 51.6 bits (122), Expect = 2e-06
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 66/327 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 691 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 741
Query: 354 LKEKDEVAVETT-TPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGE 412
+KD + + Q+ ++ ILN + K T Q + ++EE L
Sbjct: 742 AADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLKG 796
Query: 413 IVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF----- 460
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 797 VIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKD 856
Query: 461 ----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGEP 495
++EEL++ +D+ R LG I F+ E+F
Sbjct: 857 DDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF---------K 907
Query: 496 FRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDKM 554
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K+
Sbjct: 908 LKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKI 965
Query: 555 LCPSE-SMLTRSLLLEVIELHANSWNP 580
+ + S R +L +V++L ++W P
Sbjct: 966 IKEKKTSSRIRFMLQDVLDLRGSNWVP 992
>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
isoform 4 [Homo sapiens]
Length = 1403
Score = 51.6 bits (122), Expect = 2e-06
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 66/327 (20%)
Query: 295 EAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSS-KDRLRRR 353
E PR P L P S++ GP E ++ I + E K+ + + K +R
Sbjct: 495 ELPRGPAGLGPRRSQQ-------GPRKEPRK--IIATVLMTEDIKLNKAEKAWKPSSKRT 545
Query: 354 LKEKDEVAVETT-TPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGE 412
+KD + + Q+ ++ ILN + K T Q + ++EE L
Sbjct: 546 AADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVT-----QLAIDTEERLKG 600
Query: 413 IVRTIYQKAVSDRSFAFTAAKLCDKMALFMVEGTK-------FRSLLLNMLQKDF----- 460
++ I++KA+S+ +F+ A +C + V T+ FR LLLN QK+F
Sbjct: 601 VIDLIFEKAISEPNFSVAYANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKD 660
Query: 461 ----------------------TVREELQQ-QDV--ERWLGFITFLCEVFGTMRSSTGEP 495
++EEL++ +D+ R LG I F+ E+F
Sbjct: 661 DDEVFEKKQKEMDEAATAEERGRLKEELEEARDIARRRSLGNIKFIGELF---------K 711
Query: 496 FRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDKM 554
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K+
Sbjct: 712 LKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKI 769
Query: 555 LCPSE-SMLTRSLLLEVIELHANSWNP 580
+ + S R +L +V++L ++W P
Sbjct: 770 IKEKKTSSRIRFMLQDVLDLRGSNWVP 796
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
[Homo sapiens]
Length = 1585
Score = 43.1 bits (100), Expect = 7e-04
Identities = 70/326 (21%), Positives = 131/326 (40%), Gaps = 57/326 (17%)
Query: 297 PRSPDTLAPVAS-ERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRR-- 353
PR PD A R P G P + + S +R R IT+ L++
Sbjct: 672 PRGPDFTPAFADFGRQTPGGRGVPLLNVGSRRSQPGQRREPRKIITVSVKEDVHLKKAEN 731
Query: 354 -LKEKDEVAVETTTPQQNKMDKLIEILNSMRNNSSDVDTKLTTFMEEAQNST-NSEEMLG 411
K + + P+ K +L + S+ N + M++ T ++EE L
Sbjct: 732 AWKPSQKRDSQADDPENIKTQELFRKVRSILNKLTP--QMFNQLMKQVSGLTVDTEERLK 789
Query: 412 EIVRTIYQKAVSDRSFAFTAAKLCDKMALFMV-------EGTKFRSLLLNMLQKDFTVRE 464
++ +++KA+ + SF+ A +C + V FR LLLN QK+F +
Sbjct: 790 GVIDLVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNTVNFRKLLLNRCQKEFEKDK 849
Query: 465 ------ELQQQDVE------------------------RWLGFITFLCEVFGTMRSSTGE 494
E +Q+++E R +G I F+ E+F
Sbjct: 850 ADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELF--------- 900
Query: 495 PFRVLVCPI-YTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASARDK 553
++L I + C+ +LL++ D E+++ C L + G+ L+ + + + + +K
Sbjct: 901 KLKMLTEAIMHDCVVKLLKNHD--EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEK 958
Query: 554 MLCPSE-SMLTRSLLLEVIELHANSW 578
++ + S R +L +VI+L +W
Sbjct: 959 IVKERKTSSRIRFMLQDVIDLRLCNW 984
>gi|110630018 eukaryotic translation initiation factor 4 gamma, 2
isoform 2 [Homo sapiens]
Length = 869
Score = 40.8 bits (94), Expect = 0.004
Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 55/271 (20%)
Query: 352 RRLKEKDEVAVETTTPQQNKMDKLIE----ILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 407
R + D A + ++ + D + ILN + D KL +E S+
Sbjct: 54 RSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFD---KLC--LELLNVGVESK 108
Query: 408 EMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALF--------------MVEGTKFRSLLL 453
+L ++ I KA+ + ++ A+LC ++A + T FR LL+
Sbjct: 109 LILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLI 168
Query: 454 NMLQKDFTVR----------------EELQQQDVER--WLGFITFLCEVFGTMRSSTGEP 495
+ LQ +F R EE +Q+ + + LG I F+ E+ G+
Sbjct: 169 SKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGEL--------GKL 220
Query: 496 FRVLVCPIYTCLRELL------QSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLAS 549
+ ++ C++ LL Q +D+ ED C + RL E+ +M + A
Sbjct: 221 DLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFAR 280
Query: 550 ARDKMLCPSESMLTRSLLLEVIELHANSWNP 580
ML R LL + +EL + W P
Sbjct: 281 MCSLMLSKELPARIRFLLQDTVELREHHWVP 311
>gi|4503539 eukaryotic translation initiation factor 4 gamma, 2
isoform 1 [Homo sapiens]
Length = 907
Score = 40.8 bits (94), Expect = 0.004
Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 55/271 (20%)
Query: 352 RRLKEKDEVAVETTTPQQNKMDKLIE----ILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 407
R + D A + ++ + D + ILN + D KL +E S+
Sbjct: 54 RSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFD---KLC--LELLNVGVESK 108
Query: 408 EMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALF--------------MVEGTKFRSLLL 453
+L ++ I KA+ + ++ A+LC ++A + T FR LL+
Sbjct: 109 LILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLI 168
Query: 454 NMLQKDFTVR----------------EELQQQDVER--WLGFITFLCEVFGTMRSSTGEP 495
+ LQ +F R EE +Q+ + + LG I F+ E+ G+
Sbjct: 169 SKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGEL--------GKL 220
Query: 496 FRVLVCPIYTCLRELL------QSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLAS 549
+ ++ C++ LL Q +D+ ED C + RL E+ +M + A
Sbjct: 221 DLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFAR 280
Query: 550 ARDKMLCPSESMLTRSLLLEVIELHANSWNP 580
ML R LL + +EL + W P
Sbjct: 281 MCSLMLSKELPARIRFLLQDTVELREHHWVP 311
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 37.4 bits (85), Expect = 0.040
Identities = 41/188 (21%), Positives = 71/188 (37%), Gaps = 8/188 (4%)
Query: 175 PHEVEIAHTKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPH 234
P E + ++ R + DR Q R P++ D + + +R + +GG
Sbjct: 1192 PRESRPSEEREWDREKERDRDNQDREENDKDPERERDRERDVDREDRFRRPRDEGGWRRG 1251
Query: 235 PSGRPTHHGYSQNR-RWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSS 293
P+ + S R + + D+ + R+ ++ P L +
Sbjct: 1252 PAEESSSWRDSSRRDDRDRDDRRRERDDRRDLRERRDLRDDRDRRGPPLRSEREEVSSWR 1311
Query: 294 LEAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPERIGERPKITLLQSSKDR--LR 351
R D + ER PP++ P + R+ ER GE+ K + ++ KDR LR
Sbjct: 1312 RADDRKDDRV----EERDPPRRVPPPALSRDRERDRDREREGEKEKAS-WRAEKDRESLR 1366
Query: 352 RRLKEKDE 359
R E DE
Sbjct: 1367 RTKNETDE 1374
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 37.0 bits (84), Expect = 0.052
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 202 GGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRP--THHGYSQNRRWHHGNMKHPP 259
G N +HG + GS+KH S + + H SG P T H ++ + + P
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 260 GDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERLPPQQSGGP 319
G+ + E + E P E +G+ G + P Q SG P
Sbjct: 121 GE--HLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAP 178
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 37.0 bits (84), Expect = 0.052
Identities = 41/164 (25%), Positives = 59/164 (35%), Gaps = 32/164 (19%)
Query: 177 EVEIAHTKKLFRRRRNDRRR-QQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHP 235
E E T+ R R R R + R P +P+ + +R +SY P P
Sbjct: 268 EKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPR----------RRHRSRSRSYSPRRRPSP 317
Query: 236 SGRPTHHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLE 295
RP S RR M PP HR ++ + +G + SS
Sbjct: 318 RRRP-----SPRRRTPPRRMPPPP-------RHRRSRSPVRRRRRSSASLSGSSSSSSSS 365
Query: 296 APRSPDTLAPVASERLPPQQSGGPEVETKR-KDSILPERIGERP 338
RSP + PP+++ P +T+R S P R RP
Sbjct: 366 RSRSP--------PKKPPKRTSSPPRKTRRLSPSASPPRRRHRP 401
>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo
sapiens]
Length = 1343
Score = 36.6 bits (83), Expect = 0.068
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 200 PPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHP 258
PPGG+ G H P S+ H+ H ++GG P + P HGYS++ G K P
Sbjct: 941 PPGGHGGG--GGHGPPSSHHHHHHHHHHRGGEPPGDTFAP-FHGYSKSEDLSSGVPKPP 996
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 36.2 bits (82), Expect = 0.088
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 32/216 (14%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 124 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 176
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 177 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 225
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRR---------LKEKDEVAVETTTPQQNKM 372
R+ ++ E ER + L ++ R R L++K E +T QN++
Sbjct: 226 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 282
Query: 373 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 407
L E+ + + D +T +E+Q + E
Sbjct: 283 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 318
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 36.2 bits (82), Expect = 0.088
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 32/216 (14%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 256 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 308
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 309 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 357
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRR---------LKEKDEVAVETTTPQQNKM 372
R+ ++ E ER + L ++ R R L++K E +T QN++
Sbjct: 358 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 414
Query: 373 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 407
L E+ + + D +T +E+Q + E
Sbjct: 415 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 450
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 36.2 bits (82), Expect = 0.088
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 32/216 (14%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 230 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 282
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 283 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 331
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRR---------LKEKDEVAVETTTPQQNKM 372
R+ ++ E ER + L ++ R R L++K E +T QN++
Sbjct: 332 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 388
Query: 373 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 407
L E+ + + D +T +E+Q + E
Sbjct: 389 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 424
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 36.2 bits (82), Expect = 0.088
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 32/216 (14%)
Query: 203 GNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDK 262
G++ Q H S H HQ PH P HH + Q HH ++ P
Sbjct: 263 GSRQDQTPHHHMHS--HPHQHQTLPPHHPYPHQHQHPAHHPHPQP---HH--QQNHPHHH 315
Query: 263 GEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERL-PPQQSGGPEV 321
+ H + T +P L H+ +A SP T ++ + PPQ +GG
Sbjct: 316 SHSHLHAHPAHHQTSPHPPL--------HTGNQAQVSPATQQMQPTQTIQPPQPTGG--- 364
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRR---------LKEKDEVAVETTTPQQNKM 372
R+ ++ E ER + L ++ R R L++K E +T QN++
Sbjct: 365 ---RRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEV 421
Query: 373 DKL-IEILNSMRNNSSDVDTKLTTFMEEAQNSTNSE 407
L E+ + + D +T +E+Q + E
Sbjct: 422 SMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPE 457
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 35.8 bits (81), Expect = 0.12
Identities = 49/238 (20%), Positives = 77/238 (32%), Gaps = 29/238 (12%)
Query: 142 REGCGKGKLEDGDGINLNDIEKVL-PAWQGYHPMPHEVEIAH----TKKLFRRRRNDRRR 196
R G G D G + E PA E E A T R + R +
Sbjct: 50 RRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKRLQ 109
Query: 197 QQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYSQNRRWHHGNMK 256
Q P G Q+ G SA R + + +AP P+ R G+ +R +
Sbjct: 110 LQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSR----GHRTEKRKRQQPQR 165
Query: 257 HPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDTLAPVASERLPPQQS 316
P G G+ + +P + A +P + +R P Q
Sbjct: 166 RPAGGTGQRRGSGS--------SPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQ 217
Query: 317 GGPEVETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKDEVAVETTTPQQNKMDK 374
P T +R G R S D+ R + +E++ A T + ++ +K
Sbjct: 218 CRPAGGT-------GQRRGSRS-----SPSADQQRAQDREEEAAAAPAPTSRGHRTEK 263
Score = 35.4 bits (80), Expect = 0.15
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 188 RRRRNDRRRQQRP---PGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGY 244
R R ++R+ Q+P P G Q+ G SA R + + +AP P+ R G+
Sbjct: 204 RGHRTEKRKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSR----GH 259
Query: 245 SQNRRWHHGNMKHPPGDKGE 264
+R + P G G+
Sbjct: 260 RTEKRKPQQPQRRPAGGTGQ 279
Score = 33.9 bits (76), Expect = 0.44
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 13/133 (9%)
Query: 183 TKKLFRRRRNDRRRQQRPPGGNKPQQHGDHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHH 242
T + R + R++ QR P G Q+ G SA + + +AP P+ R
Sbjct: 149 TSRGHRTEKRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSR---- 204
Query: 243 GYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSLEAPRSPDT 302
G+ +R P G G+ R ++ + + + + +D + + R T
Sbjct: 205 GHRTEKRKPQQPQCRPAGGTGQ---RRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRT 261
Query: 303 LAPVASERLPPQQ 315
E+ PQQ
Sbjct: 262 ------EKRKPQQ 268
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 35.4 bits (80), Expect = 0.15
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 264 EAGAHRNAKETMTIENPKLEDTAGDTGHSSLEA--PRSPDTLAPVASERLPPQQSGGPEV 321
E + + +ET+ ++ ++ + + S E P+ P+ PV + + PQ +
Sbjct: 338 EEESRKTNEETILEQSEMMKPESPEEIRKSNEKKNPQPPEETGPVLPQEINPQVE--EKT 395
Query: 322 ETKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKDEVA---VETTTPQQNKMD----- 373
+TK + IL +P+ T ++ SK+ +K K V +E P++ K+
Sbjct: 396 QTKPTEKILELPDETKPRETHVEFSKEDRPEPIKSKYSVGNDELEHREPKRGKLSLSDKF 455
Query: 374 -KLIEILNSMRNNSSDVDT---------KLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVS 423
K L S+R + + T KL EE S SE E+ +++K V
Sbjct: 456 RKEYYALGSLRESEESIGTHYEFLQPLQKLLNVSEECSYSDPSESQT-ELSEFVHEKEVV 514
Query: 424 DRS 426
D S
Sbjct: 515 DLS 517
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 35.0 bits (79), Expect = 0.20
Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 36/214 (16%)
Query: 188 RRRRNDRRRQQRPPGGNKPQQHG--DHQPGSAKHNRDHQKSYQGGSAPHPSGRPTHHGYS 245
R R + ++ +P KP H D++ + RD K+ G P G PT
Sbjct: 1289 REERPENKKPVKPHSSFKPDNHVRIDNRLLEKPYVRDDDKAKPGFL---PKGEPT----- 1340
Query: 246 QNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDTGHSSL------EAPRS 299
RR G + D G + + T+ P D + S + E PR
Sbjct: 1341 --RRGRGGTFRRGGRDPGGRPSRPS-----TLRRPAYRDNQWNPRQSEVPKPEDGEPPRR 1393
Query: 300 PDTLAPVASERLPP--QQSGGPEVE-TKRKDSILPERIGERPKITLLQSSKDRLRRR--- 353
+ P+A+++ PP ++ P E +R+ P R + P+ RLR R
Sbjct: 1394 HEQFIPIAADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFR-------RLREREAA 1446
Query: 354 LKEKDEVAVETTTPQQNKMDKLIEILNSMRNNSS 387
K + VAV T N + + L + N +
Sbjct: 1447 SKSNEVVAVPTNGTVNNVAQEPVNTLGDISGNKT 1480
>gi|55956923 5-hydroxytryptamine (serotonin) receptor 1A [Homo
sapiens]
Length = 422
Score = 34.7 bits (78), Expect = 0.26
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 230 GSAPHPSGRPTHHGYSQNRRWHHGNMKHPPGDKGEAGAHRNAKETMTIENPKLEDTAGDT 289
G++P P + + +G S +R W G G GA R + +E ++
Sbjct: 243 GASPAPQPKKSVNGESGSRNWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSK 302
Query: 290 GHSSLEAPRSPDTLAPVASERLPPQQSGGPEVETKRKDSILPER 333
H L + P AP + ER + + E KRK ++ ER
Sbjct: 303 EHLPLPSEAGPTPCAPASFERKNERNA-----EAKRKMALARER 341
>gi|217416374 hypothetical protein LOC92749 [Homo sapiens]
Length = 740
Score = 34.7 bits (78), Expect = 0.26
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 320 EVETKRKDSILPERIGERPKITLLQSSKDRLRRR-LKEKDEVAVETTTPQQNKMDKLIEI 378
+++ ++ IL +++ +R I L K + LK++DE + + Q+ K+++L +I
Sbjct: 288 KIKLEQDVQILEQQLQQRKAIYQLNQEKLEYNLQVLKKRDEESTVIKSQQKRKINRLHDI 347
Query: 379 LNSMRNNSSDVDTKLTTFMEEAQNSTNSEEML 410
LN++R S ++ F EE Q+ T+ + L
Sbjct: 348 LNNLR---SKYAKQIKQFQEENQSLTSDYKRL 376
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,550,405
Number of Sequences: 37866
Number of extensions: 1334402
Number of successful extensions: 4379
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 4156
Number of HSP's gapped (non-prelim): 322
length of query: 598
length of database: 18,247,518
effective HSP length: 108
effective length of query: 490
effective length of database: 14,157,990
effective search space: 6937415100
effective search space used: 6937415100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.