Guide to the Human Genome
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Name: SERTAD2 Sequence: fasta or formatted (314aa) NCBI GI: 7661926
Description:

SERTA domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         20           2
 C cysteine            1.9          6           1
 D aspartate           8.6         27           4
 E glutamate           6.7         21           2
 F phenylalanine       3.5         11           1
 G glycine             4.8         15           2
 H histidine           1.6          5           1
 I isoleucine          3.2         10           1
 K lysine              5.1         16           1
 L leucine            11.1         35           2
 M methionine          3.2         10           1
 N asparagine          1.6          5           2
 P proline             8.9         28           2
 Q glutamine           3.8         12           1
 R arginine            2.5          8           2
 S serine             12.7         40           3
 T threonine          10.2         32           2
 V valine              2.5          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SERTA domain containing 2 
CDCA4                 0.061   cell division cycle associated 4 
CDCA4                 0.061   cell division cycle associated 4 
SERTAD1               0.058   SERTA domain containing 1 
MUC17                 0.040   mucin 17 
LOC100134147          0.027   PREDICTED: hypothetical protein 
LOC100128719          0.025   PREDICTED: hypothetical protein, partial 
LOC100128719          0.025   PREDICTED: hypothetical protein, partial 
PCLO                  0.025   piccolo isoform 2 
PCLO                  0.025   piccolo isoform 1 
USP31                 0.023   ubiquitin specific peptidase 31 
HGS                   0.020   hepatocyte growth factor-regulated tyrosine kinase su...
LOC728888             0.020   PREDICTED: similar to acyl-CoA synthetase medium-ch...
KDM6B                 0.020   lysine (K)-specific demethylase 6B 
IRS2                  0.020   insulin receptor substrate 2 
VASN                  0.020   slit-like 2 
LMOD2                 0.018   leiomodin 2 (cardiac) 
BAZ2A                 0.018   bromodomain adjacent to zinc finger domain, 2A [Homo...
BZRAP1                0.018   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.018   peripheral benzodiazepine receptor-associated prote...
LOC100133756          0.017   PREDICTED: hypothetical protein, partial 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
POLR2A                0.017   DNA-directed RNA polymerase II A 
MUC12                 0.017   PREDICTED: mucin 12 
MUC12                 0.017   PREDICTED: mucin 12 
MUC12                 0.017   PREDICTED: mucin 12 
FKBP15                0.017   FK506 binding protein 15, 133kDa 
SBNO1                 0.017   sno, strawberry notch homolog 1 
NACAD                 0.017   NAC alpha domain containing 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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